Oryctolagus cuniculus (rabbit): 100353573
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Entry
100353573 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04120
Ubiquitin mediated proteolysis
ocu04137
Mitophagy - animal
ocu04144
Endocytosis
ocu04340
Hedgehog signaling pathway
ocu04350
TGF-beta signaling pathway
ocu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100353573
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100353573
04350 TGF-beta signaling pathway
100353573
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100353573
04137 Mitophagy - animal
100353573
09144 Cellular community - eukaryotes
04520 Adherens junction
100353573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100353573
04121 Ubiquitin system [BR:
ocu04121
]
100353573
03029 Mitochondrial biogenesis [BR:
ocu03029
]
100353573
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100353573
Membrane trafficking [BR:
ocu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100353573
Autophagy
Mitophagy
Other mitophagy associated proteins
100353573
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
HECT type E3
100353573
Mitochondrial biogenesis [BR:
ocu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100353573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
100353573
NCBI-ProteinID:
XP_051703729
Ensembl:
ENSOCUG00000016326
LinkDB
All DBs
Position
6:28606395..28714614
Genome browser
AA seq
757 aa
AA seq
DB search
MSNPGTRRSGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAVSRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDGPGAAGGGGNCRFVESPSQDQRLQAQRLRTPEVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRVPSPLGTIPGGDEAFLYEFLLQGHTAEPRDLNSV
NCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCRLKEPSQPLPLPS
EGSVEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMR
PKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNSYMLQINPDSS
INPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLV
WILENDITPVLDHTFCVEHNAFGRLLQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGI
EAQFLALQKGFSELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVR
WFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLP
KAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacgcgcagaagcggctccagcatcaagatccgtctgacagtgtta
tgtgccaagaaccttgcaaagaaggacttcttccggctcccggacccctttgcgaagatc
gtcgtggacgggtctggccagtgccactccaccgacaccgtgaaaaacacgctggaccca
aagtggaaccagcattacgacctgtacgtggggaaatcggactccataaccatcagcgtg
tggaaccacaagaagattcacaagaagcagggcgccggcttcctgggctgtgtgcggctg
ctctccaacgccgtcagccggctgaaagacaccggatatcagcgtttggatctatgcaaa
ctaaatccctcggacactgacgcagttcgtggccaaatagtggtcagtttacagacacga
gacaggataggcaccggcgggtccgtggtagactgcaggggactactagaaaatgaagga
accgtgtacgaagactcggggcctgggaggccgctcagctgcttcatggaggagccagcc
ccttacacggatggccctggagccgccggcggcggcgggaactgcaggttcgtggaatcc
ccgagtcaagatcagagacttcaggcccaacggctgcggactcccgaggtccgaggatcg
ctccaaacgccacagaaccgaccccacggccaccagtccccggaactgcccgaaggctac
gagcaaagaaccacagtgcaggggcaagtttactttctgcacacacagaccggagttagc
acgtggcacgacccccgggtacccagtcccttggggaccattcctgggggagatgaagct
tttctatacgagttccttctccaaggccatacagctgagcccagagacctcaacagcgtg
aactgtgatgagctcggcccgctgccccccggctgggaagtcaggagcacggtttcgggc
aggatctacttcgtcgaccacaataaccgcaccacgcagttcacggacccgaggctgcac
cacatcatgaatcaccagtgccggctgaaggagcccagccagcccctgcccttgcccagc
gaaggctcggtggaggacgaggagctccctgcccagaggtacgaacgcgacctcgtccag
aagctcaaagtcctcaggcacgagctgtcgctgcagcagccgcaggccggccactgccgc
atcgaggtttcccgagaagaaatatttgaggagtcttaccgccagataatgaagatgcgc
ccgaaggacttgaagaagcggctgatggtgaagttccgtggggaggagggcctggattac
ggcggcgtggcgagggagtggctttacttgctgtgccacgagatgctgaacccctactac
gggctcttccagtactccacggacaacagctacatgctgcagatcaaccccgactcctcc
atcaaccccgaccacttgtcttacttccacttcgtgggtcggatcatgggcctggccgtg
ttccacgggcactacatcaacgggggcttcacggtccccttctacaagcagctgctgggg
aagcccatccagctgtcggacctggagtcggtggacccggagctgcacaaaagcctggtg
tggatcctggagaatgacatcacgccggtgctggaccacacgttctgcgtggagcacaat
gctttcgggcggctccttcagcatgaactcaagcccaacggcaggaacgtgcccgtcacg
gaggagaacaagaaagaatacgtccggctgtacgtgaactggcggttcatgcgtgggatt
gaggcccagttcctagccctgcagaagggcttcagcgagctcatccctcagcacctcctg
aagccgttcgaccagaaggagctggagttgatcataggcggcctggacaagatcgacttg
aacgactggaagtcgaacacgcggctcaagcactgcgtggccgacagcaacatcgtgcgc
tggttctggcaggcggtggagaccttcgacgaggagcggagggcccggctgctgcagttc
gtgacggggtccacgcgcgtgccgctccaaggcttcaaggccttgcaaggttccacaggc
gccgcagggccccggctgttcaccatccacctgatagacgccaacacagacaacctcccc
aaagcgcatacctgctttaaccggatcgacatccccccgtatgagtcctacgagaagctc
tacgagaagctgctgaccgcggtggaggagacctgtgggtttgccgtggagtga
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