Oryctolagus cuniculus (rabbit): 100353605
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Entry
100353605 CDS
T03373
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100353605
Membrane trafficking [BR:
ocu04131
]
Protein recycling
Others
EARP complex
100353605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
100353605
NCBI-ProteinID:
XP_008259945
Ensembl:
ENSOCUG00000000625
UniProt:
G1SDQ5
LinkDB
All DBs
Position
10:complement(32496016..32611718)
Genome browser
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIENLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQNAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCACNT
DTKFQKLQYKDLCTHVIPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDGADTAAAAEG
SNIMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPVSTSSKSVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPAATLTAAEERREKVPSPHLSHLVVLTAG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDLD
RPRR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaagtctcttatgacccgtcagggtctgaaaagccctccggagagcctc
agcgacctcggcgccatcgagaacctccgggtccctggaaaggaggaattcagggaactc
cgagaacagcccagtgaccctcaagctgaacaagagctgattaatagcattgaacaagta
tatttttctgcagactcatttgatattgttaaatatgaactggagaagctcccacctgtt
ctcaatttgcaagaattagaggagtacagagacaaactgaagcagcagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcctatgtaaaggaacttgaa
agagttacctcactgcagacaggacttcagctggctgctgttatctgcaccaatgggagg
agacacctgaatattgcaaaagaaggttttactcaagctagcttaggcctccttgcaaat
caaaggaagcgtcagctgctgattggcctcctgaaatctctgagaacgatcaaaacattg
caaagaacagatgtacgcttaagtgaaatgctggaggaggaagactatcctggggcaata
cagctatgcctggaatgtcagaatgcggccagcaccttcaagcattacagctgtatcagt
gaactgaattcaaagctgcaagacactttagagcaaattgaggagcaattggatgtggct
ctttctaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgactgctcggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcacaatactgtgtttcaagtcgttcttggttacgtggagctctgtgcgtgcaataca
gatacgaaattccaaaagctgcagtataaagatctctgtacacacgtcataccagacagc
tacattccctgccttgcagacctgtgcaaagctctctgggaagtcatgctcagctactac
aggacaatggagtggcatgagaagcacgatggcgcggataccgctgcggctgctgaaggg
agtaatattatgggtaccgaagaaacgaattttgatcgtggttacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctgaaagtgaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgacttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtgggagcaagtctgaagttttgcaagagtct
attagaaaacaaagtgtcaattatttcaagaactaccatagaacgcgacttgatgagctg
agaatgttcttagagaatgaaacgtgggaactttgtcctgttaaatcgaatttcagcatc
ttacaacttcacgaatttaaattcctggagcagtcccgttccccatcggtttcacctagt
aagcagccagtctcgacttcctcaaagtcagtgaccttgtttgagcagtactgcagtggc
ggcaatccatttgaaatccaggccaaccacaaggacgaagaaacggaggatgtcttggct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctaccaagagtatgacagtgac
agtgatgttcctgaggaactcaagcgagactacgtggatgagcagacaggcgatgctcct
gtgaaaagtgtttctcgagaaaccctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaacgcacctatcctaacaaatacaacgttgaatgtcataaggcttgttgggaaa
tacatgcagatgatgaatattcttaagccaattgcctttgatgttatccatttcatgtct
caactgttcgattattacctgtatgcaatatataccttttttggtcggaatgattcgttg
gaatcaacaggacttggcctcagtagtagtagactaagaacaactctaaacagaatacaa
gaaagccttattgatctggaggtttcagcagaccctgctgccaccctcacagcagcagaa
gaaagaagggagaaggtcccgagcccacacctcagtcaccttgtggttctgacggctggc
gacacgttgtatgggttggcagaaagagtggtagccacggaatccttggtgttcttggct
gaacagtttgagttccttcagccccatctggatgctgtgatgcctgcggtcaaaaagcct
ttccttcagcagttctattcccagacagtctcaactgccagtgaactacgcaaacccatt
tactggattgtagctggcaaagccatcgattatgaacagatgctgctgctaatggctaat
gtgaaatgggatgtaaaggaaattatgtcacagcacaacatatatgtagatgcattgcta
aaggaatttgaacagtttaacaggcgattaaatgaagtttctaagagagttcgaatacct
ttgcctgtgtctaatatactttgggaacattgtattcgattggctaatagaactattgtg
gaaggatatgccaacgtcaagaagtgcagtaatgagggtcgtgccttaatgcagttagat
tttcaacagtttttaatgaaacttgaaaaactaaccgatattagacccattcctgataaa
gaatttgtggaaacttacattaaagcctactacctaactgaaaatgacatggaacgttgg
atcaaggagcacagggaatattcaacgaagcagctaaccaacctggtaaacgtttgcctg
ggatcccatatcaataagaaggcaagacagaagcttctagctgccatagatgacctagac
agacctagaagataa
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