Oryctolagus cuniculus (rabbit): 100353761
Help
Entry
100353761 CDS
T03373
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100353761
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocu00535
]
100353761
Proteoglycans [BR:
ocu00535
]
Extracellular matrix (ECM) proteoglycans
Others
100353761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Fn3_VIN3
VWA_3
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
100353761
NCBI-ProteinID:
XP_002710799
Ensembl:
ENSOCUG00000015234
UniProt:
G1T933
LinkDB
All DBs
Position
3:135663868..135915900
Genome browser
AA seq
1796 aa
AA seq
DB search
MKIFQCKMRYWLLPAFLTIAYFCTIVQGQVAPPTRLRYSVLSHDSIQISWKAPRGKFGGY
KLLVTPASGGKTNQLNLQNTATKAIIQGLMPEQNYTVQIIAYNKDKESKPAQGQFRIKDL
EKRKDPKPRVKVVDKGNGSRPSVPEEVKFVCQTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVTAFNVGSEKTRVGLAQYSGDPRIEWHLNAFSTKDEVIEAVRNLPYKGGNTLTGLA
LNYIFENSFKPEAGSRTGVPKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADVN
ELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDREIKASALATVGPPTELI
TSEVTARSFMVNWTHAPGKVQKYRVVYYPTRGGKPEEVVVDGSVSSTVLKSLMSLTEYQI
AVFAIYAHTASEGLRGTETTLALPMASDLELYDVTENSMRVKWDAVPGASGYLILYAPLT
EGLAGDEKEMKIGETYTDIELSGLSPNTEYTVTVYAMFGEEASDPVTGQETTLPLSPPRN
LRISNVGSNSARLTWDPTSRKISGYRIVYNNADGTEINEVEVDPITTFPLKGLTPLTEYT
VAIFSMYEEGQSEPLTGVFTTEEVPAQQYLEIDEVTTDSFRVTWHPLSADEGQHKLMWIP
VYGGKTQEVVLREEQDSHVIEGLEPGTEYEVSLLAVLDDGSESEVVTAVGTTLDSFWTEP
VTTIAPTSSVTSVFQTGIRNLVVDDETTSSLRVKWDISDSNVEQFRVTYLTAQGDPAEEV
VGTVMVPGRQNSLLLKSLLPDTEYKVTVTPIYSDGEGVSVSAPGKTLPSSGPQNLRVSEE
WYNRLRITWDPPPSPVKGYRIVYKPVSVTGPTLETFVGADINTILITNLLSGMDYNVKIF
ASQASGFSDALTGMVKTLFLGVTNLQANQIEMTSLCAQWQMHRHATAYRVVIESLQDTQK
QESTVSGGTTRHCFYGLQPDSEYKISVYTKLQELEGPSVSIMEKTESFPTEPPTFPPTIP
PAREVCKAAKADLVFMVDGSWSIGDDNFNKIINFLYSTVGALDKIGTDGTQVAMVQFTDD
PRTEFKLNAYETKETLLDAIKRISYKGGNTKTGKAIKHVRDTLFTAESGTRRGIPKVIVV
ITDGRSQDDVNKISREMQSDGYNIFAVGVADADYSELVNIGSKPSARHVFFVDDFDAFKK
IEDELITFVCETASATCPLLHKDGIDLAGFKMMEMFGLVEKDFSLVEGVSMEPGTFNVYP
CYQLHKDALVSQPTKYLHPEGLPSDYTISFLFRILPDTPQEPFALWEILNKNSDPLVGII
LDNGGKTLTYFNYDYSGDFQTVTFEGPEIKKIFYGSFHKLHVIVSKTLVKVVIDCKEVGE
KAINASANITADGVEVLGRMVRSRGPNGNSAPFQLQMFDIVCSTSWANRDKCCELPGLRD
EESCPDLPHSCSCSETNELALGPAGPPGGPGLRGPKGQQGEQGPKGPDGPRGETGPPGPQ
GPPGPQGPSGLSIQGMPGMPGEKGEKGDTGLPGPQGIPGGIGSPGRDGSPGQRGFPGKDG
SSGPPGPPGPIGIPGAPGIPGITGSTGPQGALGPPGVPGPKGERGERGDLQSQAMVRAVA
RQVCEQLIQSHMARYTAILNQIPSHSSSIRTIQGPPGEPGRPGSPGTPGEQGPPGSPGFP
GSAGVPGTPGERGLTGIKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGP
PGHLGVPGPQGPSGQPGYCDPSSCSAYGVGAPHPDQPEFTPVQDEDEAMELWGPGI
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttcaatgcaagatgcggtactggctgcttccagcttttttgacaattgct
tatttctgcactatcgtccagggtcaagtagctccacccacaaggttaagatatagtgta
ttatctcatgacagtattcagatttcatggaaggctccaagagggaaatttggtggatac
aaacttcttgtgactccggcttcaggtggaaaaaccaatcagttaaatctccagaacact
gcaactaaagcaattattcaaggtcttatgccagaacagaattacacagttcaaattatt
gcatacaacaaagacaaagaaagcaagccagctcaaggccaattcagaattaaagattta
gaaaaaagaaaggatcctaagcccagagtcaaggttgtggacaaaggaaatgggagtagg
ccgtctgtaccagaagaggtgaaatttgtctgtcagactccagctattgctgacattgta
atcctggttgatggttcatggagtattggaagattcaacttcagactggttcggcttttc
ttggaaaacctggttaccgcattcaatgtgggctcagagaagacacgagtcggtcttgca
cagtacagcggggaccctcgaatagaatggcacttgaatgcctttagcacaaaagatgaa
gtgattgaagctgttcgaaaccttccttataagggaggaaatacactcacaggtcttgct
ttgaactacatttttgaaaacagcttcaaaccagaagcaggatcaaggactggagtaccc
aaaattggaattttaatcacagatggaaaatcccaagatgatattattccaccatccaga
aatcttcgtgagtctggagtagagctgtttgccataggggtaaaaaacgctgatgtgaat
gaactgcaagagattgcctccgaaccagacagcactcatgtgtacaacgtcgcagagttc
gacctgatgcacacggtggtggagagtctgacgaggactgtctgctccagggtggaagaa
caggacagagaaatcaaagcttcagctcttgccaccgttgggccgcctacagagttgatt
acttctgaagtgactgccaggagctttatggttaactggactcatgccccaggaaaagtg
cagaaatacagagttgtgtattatcctaccaggggtggaaagccagaagaggtggtggtg
gatgggagtgtatcttccacggtgttgaaaagcttgatgtctctaactgagtatcagata
gcagtctttgcaatatatgcgcacactgctagcgaaggcctccggggaactgaaactaca
cttgctttacccatggcttctgaccttgaactgtacgatgtgactgagaacagtatgcgg
gtcaagtgggatgcagtgcctggagcctcaggatacctgatcctttatgctcctctcaca
gagggtctggctggagatgaaaaggagatgaaaattggagagacctacacagatattgaa
ttgagtggattgtcacccaatacggagtacacagtcacggtgtatgccatgtttggagaa
gaagccagtgatcctgtgacagggcaggaaacaacattgcccttaagtccaccaagaaac
ttgaggatctccaatgttggctctaacagtgcccgattaacctgggacccaacttcaaga
aagatcagtggctacagaatcgtatataacaatgcagatgggactgaaatcaatgaggtt
gaagttgatcctattactaccttccctctgaaaggcttgacaccactcacagaatatact
gtggccattttctccatgtacgaggaagggcagtcagagcctctgactggggtttttacc
acagaggaagttccagcccagcaatacttggaaatcgatgaggtgacgacagacagtttc
agagtgacctggcatcccctctcggctgatgaagggcagcacaagttgatgtggattcca
gtctatggtgggaagactcaagaggttgtcctaagggaagagcaagactcacatgttatt
gaaggcttggagcccggcaccgaatatgaagtttcactgttggctgtacttgatgatgga
agtgagagtgaggtggtgactgctgttgggaccacccttgacagtttttggacagaacca
gtcacaaccatagcacctaccagttctgtgacttcagttttccagacaggaatcagaaac
ctggttgtagatgatgaaaccacttctagcctgcgggtaaaatgggacatttctgacagc
aatgtggagcagtttagggtgacctacctgaccgctcaaggggaccctgcggaagaagtg
gtaggaacggtcatggtgcctggaaggcagaacagtctccttttgaagtctctgcttccg
gatacagaatacaaagtcaccgtgacgcccatctactctgatggagaaggtgtcagcgtc
tctgcccctgggaaaaccttgccatcctctggtcctcaaaacttaagggtctctgaggaa
tggtataaccgcctgcgcattacatgggaccctccaccttcccctgtaaagggctatcgg
attgtctataaaccagtcagtgttactggtccaacattggaaacatttgtgggagcggac
atcaacaccattcttatcaccaacctccttagtggaatggactacaatgtgaaaatattt
gcctctcaggcttctggcttcagtgatgctttgacaggcatggtgaaaacattgtttttg
ggtgtgaccaatctccaagccaaccaaattgaaatgaccagcttgtgtgctcagtggcag
atgcaccgtcacgccacagcctaccgggtagtaatagaatctctccaagatacacaaaag
caagaatccactgtgagtggagggacaactaggcattgcttctatggacttcagcctgat
tcagaatataaaatcagtgtttacacaaagctccaagagcttgagggacctagtgtgagc
ataatggaaaaaacagaatcctttccaactgaaccaccaacttttcctccaaccattcca
ccagcaagagaagtatgtaaagctgccaaggcagacctggtgtttatggtggatgggtcc
tggagcattggagatgataatttcaataagatcatcaacttcctgtatagcacagttgga
gccctggacaagattggcacagatggaactcaggttgcaatggttcagttcactgatgac
cccagaacagaatttaaactaaatgcttacgaaaccaaagagactctgcttgatgcaatt
aaacgcatttcatataaaggaggaaatacaaaaacaggaaaagcaattaagcatgttcga
gacaccttgtttactgcagagtcaggtacaagaagaggaatcccaaaagtcattgtggtt
ataactgatggacgatcacaagatgatgtgaacaaaatctccagggagatgcaatcagat
ggctacaacatttttgcagtcggtgtggccgatgcagattactcagagttggttaacatt
ggcagtaagcccagtgcgcgccacgtcttctttgtggacgattttgatgcctttaagaag
attgaagatgaattaattacttttgtctgtgaaaccgcatcagcaacctgcccactattg
cacaaggatggcattgatcttgcaggatttaagatgatggaaatgtttggtttggttgaa
aaggatttttcattggtggaaggagtttctatggagcccggtaccttcaatgtgtatcct
tgttaccagctccacaaagacgctctggtttcccagccaactaagtatttgcatccagaa
ggtttgccctctgactacaccatcagttttctgttccggattcttcctgacacaccacag
gagccctttgctctttgggaaattttaaataaaaattctgaccccttagttgggatcatt
ttagataatggtgggaaaactctaacttatttcaactatgactacagtggggattttcaa
actgttacttttgaaggacctgaaattaagaaaattttctatggaagctttcataagcta
catgttattgttagtaagactttggtcaaggtggttattgactgcaaggaagtgggtgag
aaggcaataaatgcatcagctaacatcacagcagacggtgtagaagtactagggagaatg
gttagatcaagaggaccaaatggaaattcggcaccattccagttacagatgtttgatatt
gtttgctctacatcatgggccaatcgagacaaatgctgtgaacttccaggcctgagagat
gaagaatcctgcccagacctcccacattcctgctcctgttctgaaaccaatgaattggct
ctgggaccagcaggtccaccaggtggtccaggactccgaggaccaaagggccaacaaggt
gaacaaggcccaaagggaccagatggacctcgtggtgaaacaggccctccaggaccccag
ggcccccctggacctcaaggaccaagtggtctgtccattcaaggaatgcctggaatgcca
ggtgaaaaaggagagaaaggagacactggccttcctggcccacagggtatcccaggaggc
ataggttcacctggacgtgatggctcaccaggccagaggggctttcctggaaaggatggt
tcctctggccctccaggaccaccagggccaattggcattcctggagctcctggaatcccg
gggatcactggaagcacaggaccacaaggcgcacttgggccacctggtgtccctggtcca
aagggagagcgaggagagcgcggtgacctgcagtcccaagccatggtgagagcagtggca
cgtcaagtatgtgaacagctcatccagagtcacatggccagatacacagccatcctcaac
cagattcccagccattcctcatccatccggaccatccaaggccctcctggggagcctggg
aggccaggttcacctggaacgcctggagaacaaggacccccaggctcaccaggcttcccg
ggaagtgcaggcgtgccagggaccccaggagaacgaggactaactggtatcaaaggggag
aaaggaaatccaggcattggaacgcaaggaccaagaggccccccaggaccagcaggacct
tcaggagaaagtcggcctggcagtcctgggccccctggctctcctggaccaaggggtcca
cctggtcatctgggggtgcctggaccccaaggtccttctggccagcctggatattgtgac
ccctcctcatgttctgcctatggtgtgggagctccccatccggatcagccagaattcacc
cctgtccaagatgaggatgaagccatggaactgtggggccctgggatctga
DBGET
integrated database retrieval system
