Oryctolagus cuniculus (rabbit): 100353776
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Entry
100353776 CDS
T03373
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03082
ATP-dependent chromatin remodeling
ocu04714
Thermogenesis
ocu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100353776
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100353776
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100353776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100353776
03036 Chromosome and associated proteins [BR:
ocu03036
]
100353776
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100353776
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100353776
PBAF complex
100353776
GBAF(ncBAF) complex
100353776
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
100353776
NCBI-ProteinID:
XP_051708454
Ensembl:
ENSOCUG00000014013
LinkDB
All DBs
Position
9:100406463..100572686
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGGGGGGPGAAAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVW
LGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTL
CHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDL
KLANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPD
SYDTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDDNRKPVSFRQ
RISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQ
KEDDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEEAVTT
GGKEDEDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGK
NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQ
VDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQN
FGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECI
LHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAA
LEEFSRVREEVPLELVEAHVKKVQEAARVSGKVDPTYGLESSCIAGTGPDEPEKLEGAEE
EKVETDVDSQQPEKVENKVENEVDEGDKQDGENEKHGEKEPDSEVSEDTKSDEKETEENK
ELTDTCKERENEIGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALL
VETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQME
QQQHGQTPQQAHQHSGAPGLAPLGTAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPG
PGSMMPGQPMPGRMIPTVGASIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQ
QQPPPPPADGVPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcagcaggcggcggcggcggcgggcctggggcagcggcaggcgccgcgggc
gcggggggtgcggcggcggccgcgggtctggcggtttatcgacggaaggacggcggtccg
gccagcaagttttgggagagcccggagacagtgtcccagctggattcggtgcgcgtctgg
ctgggcaagcactacaagaagtatgttcatgcggatgctcctaccaataaaacactggct
gggctggtggtacagcttctccagttccaggaagatgcctttgggaagcatgtcaccaac
ccggccttcaccaaacttcctgcgaagtgtttcatggatttcaaagcaggaggcacgttg
tgtcacattcttggggctgcatacaagtataaaaatgaacagggatggcgaaggtttgac
ctacagaatccatctcgaatggatcgtaatgtggaaatgtttatgaacattgaaaaaaca
ttggtgcagaacaattgtctgaccagacccaacatctacctcattccagacattgacctg
aagttggctaacaagttgaaagatatcatcaaacggcatcaggggacatttactgatgag
aagtcaaaagcttcccaccatatttatccatatccctcctcacaagaggatgaggagtgg
ttgagacccgtgatgagaaaagacaagcaggtgttagtacattggggattttacccagac
agctatgatacttgggtgcatagtaatgatgttgatgctgaaattgaggatccaccaatt
ccagaaaagccatggaaggttcatgtgaaatggattttggacactgacattttcaatgaa
tggatgaatgaagaggattatgaggtggatgacaacaggaagccagtgagctttcgtcag
cgaatttctacaaagaatgaagagccagtccgaagtccagaaagacgagatagaaaagca
tcagctaatgctcgaaagaggaaacattcaccttcacctccgcctcccacacccacagaa
tcacggaagaagagtgggaagaaaggccaagctagtctttatgggaaacgcagaagtcag
aaagaagatgatgagcaggaagatctcaccaaggacatggaagacccaacacctgtaccc
aatatagaggaagtagtacttcccaaaaatgtaaatccaaagaaagatagtgaaaataca
cctgttaaaggaggaactgtagcagatctagatgagcaggatgaagaagcagtcacaaca
ggaggaaaggaagatgaagatcctagcaaaggtgatccaagtcggtcggttgaccctggt
gaagataatgtaacagagcagaccaatcacatcattattcctagctatgcatcatggttt
gattacaactgtattcatgtgattgagcggcgtgcccttcctgagtttttcaatggaaag
aacaaatccaagacaccagaaatctacttggcatatcgaaattttatgatcgacacatac
cgcctaaatccccaagagtatttaaccagcactgcttgtcggaggaacttgactggagat
gtgtgtgctgtgatgagggttcatgcctttttagagcagtggggactcgttaattaccaa
gttgatccagaaagccgacccatggcaatggggcctcctcccacccctcatttcaatgta
ttagctgacaccccctctgggcttgtgcctctgcatcttcgttcacctcaggtccctgcg
gctcagcagatgttaaattttcctgagaaaaacaaagaaaaaccaattgatttgcagaac
tttggccttcgcactgatatttactccaagaaaacattagcaaagagtaaaggtgctagt
gctggaagagagtggacagaacaggagacattgctactgttggaggctctggagatgtat
aaagatgattggaacaaagtgtcggaacatgttggaagtcgcactcaggatgagtgcatt
cttcactttttgaggcttcccattgaagacccatatcttgaaaattcagatgcttctctt
ggtcctctggcctatcagcctgttcccttcagtcagtcaggaaatccagtcatgagtact
gttgcttttttggcatctgtggtggaccctcgtgtggcatctgctgcagcaaaagcagct
ttggaggaattttctcgggtgcgggaggaagtaccgctggaattggttgaagctcatgtc
aaaaaagtacaagaagcagcacgagtctctgggaaggtggatcccacctatggcttggaa
agcagctgtattgcaggcacggggcccgatgagccagagaagcttgaaggagctgaagag
gagaaagtggaaacagatgtggacagtcagcagcctgagaaggtagaaaataaagtggaa
aatgaagtggatgaaggtgataaacaagatggagaaaatgagaaacatggtgagaaggag
cccgacagtgaagttagcgaggataccaaatcagatgaaaaggagactgaagagaacaag
gaactcactgatacatgtaaagaaagagaaaatgagattgggaagaagaaagtagaacac
gaaatttctgaaggaaatgttgccacagctgcagcagctgctcttgcctcagctgctacc
aaagccaagcacctggctgctgtggaagagagaaagatcaagtccctggtagctctcctg
gttgagacacagatgaagaagttagagatcaaacttcgacattttgaggagctggaaact
atcatggacagagagaaagaagctctagaacagcagaggcagcagttgcttactgagcgc
cagaacttccacatggaacagctgaaatatgctgaattacgagctcggcagcaaatggag
cagcagcagcatggccagacccctcagcaggcacaccagcactcaggagcgcctggcctg
gccccactgggcacagcagggcaccccggcatgatgcctcatcagcagcccccgccctat
cctctgatgcaccaccagatgccaccacctcatccaccccaaccaggtcagataccaggc
ccaggttccatgatgcctgggcagcccatgccaggccgcatgattcccaccgtgggagcc
agcatccatccctctgggagtggtcctaccccccctggtatgcctccaatgccaggaaat
atcttaggaccccgggtacctctcacagcacctaatggcatgtatccccctccaccgcag
caacagccaccaccaccacccgcagacggggtccctccacctcctgctccaggcccacca
gcctcagcagctccttaa
DBGET
integrated database retrieval system
