Oryctolagus cuniculus (rabbit): 100353942
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Entry
100353942 CDS
T03373
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100353942
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100353942
Membrane trafficking [BR:
ocu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100353942
Exosome [BR:
ocu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100353942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
Paxillin
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100353942
NCBI-ProteinID:
XP_008264459
Ensembl:
ENSOCUG00000001120
UniProt:
G1SET0
LinkDB
All DBs
Position
14:complement(34187215..34222161)
Genome browser
AA seq
906 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNSVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLSAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHCFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFRPSRSAAQQELDGKPPSPTPVIVASHKANKEEKSLLELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgacttgatatcaagagaaagctcactgctagatctgatcgagttaagagt
gtggatttgcatcctacagagccatggatgttggcaagtctttacaatggcagcgtctgc
gtttggaatcatgaaacacagacactggtgaagacatttgaagtgtgtgatcttcctgtt
cgagctgcaaagtttgttgcaaggaagaattgggtggtgacaggagcggatgacatgcag
attagagtgttcaattacaatactctggagagagttcatatgtttgaagcacattcagac
tacattcgctgtattgctgtccatccaacccagcccttcattctaactagcagtgatgac
atgcttatcaagctctgggattgggataaaaaatggtcttgctcacaagtgtttgaagga
cacactcattatgttatgcagattgtgattaaccccaaagataacaatcagtttgccagt
gcgtctttggacagaaccatcaaggtgtggcagctgggctcttcatcaccaaacttcacg
ctggagggacacgagaaaggcgtgaactgcattgattactacagcggtggcgacaaaccg
tacctcatttcaggtgccgacgaccgtcttgttaaaatatgggattatcagaataaaaca
tgtgtgcagacattggagggtcacgcccaaaatgtgtcttgtgccagttttcatccggag
ttgccaatcatcattacaggttcagaagatgggacagtgcgcatttggcattcaagcacc
taccggctagagagcacgctgaattacggaatggagagggtgtggtgtgtggccagtctg
agaggctccaacagtgtcgcgctgggctatgacgaagggagcatcattgttaagcttggt
cgagaggaacctgcgatgtccatggatgccaatggaaagatcatttgggccaagcattca
gaagtccagcaggcaaacctaaaggcaatgggagatgctgaaattaaagatggagaaagg
ctgccactggcagtgaaggatatgggcagttgtgagatataccctcagactattcagcac
aatcccaacgggcggtttgttgtggtgtgcggtgatggagagtacatcatctacacggca
atggccttgagaaataagagctttgggtctgcccaggagttcgcatgggcccatgattcc
tcagaatatgcaataagagagagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaaatcatttaagccagattttggagctgaaagcatatatggaggcttcttactggga
gtcagatctgtgaatggcttagccttctatgactgggacaacacagaactcatacgcagg
attgaaattcagcccaaacacattttctggtcagactcgggagagctcgtctgcattgcc
actgaggagtcattttttatccttaagtatctgtcagaaaaagtcctgtctgcacaggaa
acacatgagggtgttaccgaagacggcattgaagacgcctttgaggttcttggtgagatt
caggaaattgtgaaaacagggctttgggtaggcgattgtttcatttacacaagttctgtg
aacagattaaattattatgtcggaggagaaatagtcaccattgcccatttggacaggaca
atgtatctcctgggctatattcctaaggataaccggctctatctgggtgataaagaatta
aacattgtaagctactccctgctggtgtcagtcctggaataccagacagctgtcatgcgg
agggacttcggtatggctgataaggtccttcccaccattccaaaggaacaaaggaccaga
gttgcacactttttggaaaagcagggctttaagcagcaagctctcacagtgtctacagat
cctgaacattgttttgagcttgctctgcagcttggagagttaaaaatcgcatatcagtta
gcagttgaagcagagtcagaacagaagtggaaacaacttgctgagctggccattagcaag
tgtcagtttggcctggcccaggagtgcctgcaccacgcacaggactacggggggctgctg
cttctggccactgcctctggaaacgctagtatggtgaacaagctggcagagggtgcagag
agagatggcaaaaataacgtggccttcatgagctactttttacagggcaagctcgatgct
tgcctggagctcttgattcgaactggacgactgccagaagctgccttcctggcccgaact
tacttacccagtcaggtttcaagggtggtcaaactctggagagagaatctctcaaaagtt
aatcagaaagcagcagaatcccttgctgacccgactgagtatgaaaatctcttccctgga
ttgaaagaagcctttgttgttgaagaatgggtgaaggagacacatgctgacctgtggcca
gccaaacagtacccacttgtcacaccaaatgaagagagaaatgttatggaagaggcaaaa
ggctttcggccctcaagatctgcagctcagcaggaactcgacgggaaacccccttctcct
actcctgttattgtggcctcccacaaagccaacaaggaagagaagagtttacttgaacta
gaagtagatctggataatttggaattagaagatatcgacacaacagatatcaacctggat
gaagatattctggatgactga
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