Oryctolagus cuniculus (rabbit): 100353970 Help Entry 100353970         CDS       T03373                                  Name (RefSeq) roquin-2 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism ocu  Oryctolagus cuniculus (rabbit) Brite KEGG Orthology (KO) [BR:ocu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ocu03000]     100353970    04121 Ubiquitin system [BR:ocu04121]     100353970 Transcription factors [BR:ocu03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     100353970 Ubiquitin system [BR:ocu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     100353970 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 Prok-RING_4 zf-C3HC4 zf_CCCH_4 zf-CCCH_UNK zf-C3HC4_4 Xin zf-C3HC4_2 Motif Other DBs NCBI-GeneID:  100353970 NCBI-ProteinID:  XP_008271577 Ensembl:  ENSOCUG00000008804 LinkDB All DBs Position 1:4309976..4373574 Genome browser AA seq 1188 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI GSTETTGKIVPSTNGISNAENSVSQLIPRSTDNTLRALETVKKVGKVGTNGQNAAGPSAE SVTENKIGSPPKTPVSNVAATSAGPSTVGTELNSVPPKSSPFLTRVPVYPQHSENIQYFQ DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPD QWAQYHTQKAPVSSTLPVAAQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWSC GTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPI ISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYSSEATSS AHYIERDRFIVTDLSSHRKHSSTGDLLSLELQQAKSNSLLLQREANALAMQQKWNSLDEG RHLTLNLLSKEIELRNGESDYTEDATDTKPDRDIELELSALDTDEPDGQTEQIEEILDIQ LGISSQSDQLLNGTAVENGHPVQQHQKESLKQKRQSLGEDHVILEEQKTILPVTSCFSQP LPVSISNASCLPITTSVSVGNLILKTHVMSEDTNDFLKPVANGKMVNS NT seq 3567 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacacggtttgcaagacc tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac attgatgtgcttcctgtcaactttgcacttctccagttagttggagcccaggtaccagat catcagtcgataaagttaagtaatttaggtgagaataaacactatgaggttgcaaagaaa tgcgttgaggatttggcactctacttaaaaccgttaagtggaggtaaaggtgtagctagt ttgaaccagagcgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaactgt caactggtggaggaagaaggtcgtgtcagagccatgcgagcagcccgttcacttggagaa agaactgtaacagaactgatattacagcatcagaaccctcagcaattgtctgccaatcta tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc ttgaagctggtattgttggcattagaagatggatctgctctctcaaggaaagttttggta ctttttgtcgtgcaaagactagagccaagatttcctcaggcatcaaaaacaagtattggt cacgttgtacaactactgtatagagcttcgtgttttaaggttaccaaaagggatgaagac tcttccctgatgcagttaaaggaggaatttcgtagttatgaggcattacgcagagaacat gatgcccaaattgttcatattgctatggaagcaggactccgaatttcacctgagcagtgg tcgtcacttttatatggtgacttggctcataaatcacatatgcagtctatcattgataag ctgcagtctccagaatcgtttgcaaagagtgtccaggagttgacaattgttctgcagcga acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct gttaaaaccgtggttcatggtcttgtggacttcatacaaaattatagtagaaaaggccat gagacacctcagcctcagccaaacagcaaatacaagactagtatgtgccgagatctgcga cagcaaggggggtgtccacgaggaacaaattgtacatttgcccattctcaggaagaactt gaaaagtatcgattaaggaataaaaagatcaatgcgactgtaagaacatttcctcttcta aataaagttggtgtaaacaacactgttacaaccacagccggaaatgtcatttctgtcata ggaagtactgaaacaacggggaaaattgttccaagtacaaatggaatttcaaatgcagaa aacagtgtttcccaactaatcccacgtagtactgacaatacattaagagctctggagact gtgaagaaagtgggaaaggttggcactaatggtcagaatgctgctgggccctctgcagag tctgtaactgaaaataaaattggttctccacctaagactcctgtaagtaatgtagctgct acctcagctgggccctctactgttggaacagaactgaattctgtgcctccaaaatccagc ccgtttctaactagagtaccagtatatcctcagcactctgaaaacattcagtattttcaa gatccaagaactcagatcccctttgaagtcccacagtacccacagacaggatactaccca ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat aacgttccagagtcttccctcccacctgcttccatgccatatgccgatcattacagtaca ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat ggaccagttcctccagttccttctggaatgtatgcccctgtgtatgacagcaggcgcatc tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg gatgtgatgcactcatctgtctatcagacatctttgcgggaaagatataactcgttagat ggctattactcagtggcttgtcagccaccaagtgagccaaggacaactgtgcctttaccg agggaaccttgtggtcatttgaagaccagttgcgaggagcagatcagaagaaagccagat cagtgggcacagtaccacactcagaaagcacctgtctcttcaactcttcctgtggcagca cagtctccaactccaccttctcctctgttcagtgtagacttccgcacggatttctctgag agtgtgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtcttgt ggcaccataggctcctgtataaatgccattgattcagagcccaaagatgtaattgctaac tcaaatgctgtgttaatggacctggacagtggggatgttaagaggagagtgcatttattt gaaactcagagaaggacaaaagaagaagatccaataattccttttagtgatggacccatc atttcaaaatggggtgcaatttctagatcctctcgtacaggttaccataccacagatcct gtgcaggctactgcttcccaaggaagtgcaactaagcccatcagcgtatcagattatgtc ccttatgtcaatgctgttgattcaaggtggagttcatacagcagtgaggccacgtcatca gcacactatattgaacgggacagattcattgttactgatttatctagtcacagaaagcat tccagtacaggagacctcttgagcctcgaacttcaacaggccaagagtaattcattactc cttcagagggaggctaatgctctggccatgcaacagaagtggaattccctagatgaaggt cgtcatcttacattaaatcttctaagcaaagaaattgaattgagaaatggagagagtgat tatacagaagatgcaacagatactaagcccgatagggatattgagttagagctttcagca cttgacactgatgaacctgatggacaaactgaacaaattgaagagatcctggacatacaa cttggtattagttctcaaagtgatcagttgctgaatggaacagcagtggaaaatgggcat ccagtacagcagcaccaaaaggagtcactaaagcagaagagacagagtttaggtgaagac catgtgattctggaggagcaaaaaacaattctgccagtaacttcttgctttagccagcca ctcccagtgtctattagcaatgcaagttgcctccccatcaccacatctgtcagtgttggc aatctcattctgaaaactcacgttatgtctgaagatacaaacgactttttaaaacctgtt gcaaatgggaagatggttaacagctga

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