Oryctolagus cuniculus (rabbit): 100354301
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Entry
100354301 CDS
T03373
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X1
KO
K04638
intraflagellar transport protein 57
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05016
Huntington disease
ocu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100354301
05022 Pathways of neurodegeneration - multiple diseases
100354301
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocu03037
]
100354301
Cilium and associated proteins [BR:
ocu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
100354301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
DUF745
Mod_r
SpecificRecomb
Motif
Other DBs
NCBI-GeneID:
100354301
NCBI-ProteinID:
XP_002716765
Ensembl:
ENSOCUG00000003973
UniProt:
G1SKU0
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All DBs
Position
14:112838020..112903004
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AA seq
429 aa
AA seq
DB search
MAAAAAVVTPSGLEDGGSRSRGEGAGEVVVERGPGAAYHMFLVMEDLVEKLKLLRYEEEF
LRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLLNKAGHPFEQPQEYDDPNATISNILA
ELRSLGRAADFPPSKLKSGYGEHVCYVLDCLAEAALKYIGFTWKRPAYPVEELEEETVPE
DDAELTLNKVDEEFVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEAILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHRSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRAAQAQLSEAKERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATI
IPESAIGSY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgcggcagtggttacgccgtcgggtttagaggatggggggtctcggtct
cgcggcgaaggagccggggaggtggtcgtggagcggggccccggcgccgcctaccacatg
ttcctggtgatggaggacttggtggagaagctgaagctgctccgctacgaggaggagttc
ctccggaagaacaacctgaagcccccgtccagacattattttgcactgcctacaaaccct
ggtgaacagttctatatgttttgcactcttgctgcttggttgcttaacaaagcaggacat
ccctttgagcagcctcaagaatatgatgaccctaacgcaacaatatctaacatattagct
gaacttcggtcattgggaagagctgcagattttcctccttcaaaattaaagtcaggttat
ggagagcatgtatgctatgtccttgattgtttagctgaggcagcattaaaatatattggt
ttcacctggaaaaggccagcatacccagtggaagaattagaagaagaaactgttccagaa
gatgatgcagaattaacattaaataaagtggatgaagaatttgtggaagaggagacagat
aatgaagaaaactttattgatctcaatgttttgaaagcccagacctatcgtttggacatg
aacgagtctgccaaacaagaagctattttggaatccacaacagatgctgcagaatggagt
ctagaagtcgaacgcgtactaccacaactaaaagtcacaattaggactgacaataaggat
tggagaatccatgttgatcaaatgcaccagcacagaagtggaattgagtctgctctaaag
gagactaagggatttttggacaaactccataacgaaattagtaggaccctggaaaagatt
ggcagccgagaaaagtacatcaacaatcagctggagcacttggttcaagagtatcgtgca
gctcaagcccagctgagtgaggcaaaggagcgataccagcaggggaatggcggagtaaca
gaaagaactagactgctgtctgaggttacagaagaattagaaaaggtaaaacaagaaatg
gaagaaaagggcagcagcatgactgatggtgctcctttggtgaagatcaaacagagctta
acaaaactgaagcaagaaacagttcagatggacattaggatcggtgttgtggaacacacc
ttactccaatcaaaactgaaggagaagtccaacatgactagagacatgcatgcaacaatt
attccagaatcagcaataggctcttattaa
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