Oryctolagus cuniculus (rabbit): 100354309
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Entry
100354309 CDS
T03373
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04110
Cell cycle
ocu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100354309
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocu00535
]
100354309
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100354309
Meiosis-specific proteins
Cohesin complex and associated proteins
100354309
Proteoglycans [BR:
ocu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100354309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
100354309
NCBI-ProteinID:
XP_002718785
Ensembl:
ENSOCUG00000011142
LinkDB
All DBs
Position
18:55037933..55084123
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaaacaggtgattatccagggttttcgaagttacagagatcaaacgattgta
gatcccttcagctcaaaacataatgttattgtgggaagaaatggatctggaaaaagtaac
tttttttatgcaattcagtttgttctcagtgatgagtttagtcatctccgtccagaacag
cgattggctttgttgcatgagggtactggtcctcgtgttatttctgcttttgtggaaatt
atttttgacaattcagacaaccggttaccaattgacaaagaggaagtatcacttcgaaga
gttattggtgccaaaaaggatcagtatttcttagataagaagatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctggtttttcccgaagcaatccttactatattgttaaa
caaggaaagatcaaccagatggcaacagcaccagattcacagagactaaagctattaaga
gaagtagctggtactagagtatatgatgaacgaaaagaagaaagtatctctctaatgaaa
gaaacagagggcaaacgagaaaaaatcaatgagttgttaaaatacattgaagagagatta
catactttagaggaagaaaaggaagaactagctcagtatcagaagtgggataaaatgaga
cgagccctggaatataccatttacaatcaggaacttaacgagactcgtgctaaacttgat
gagctttctgctaaacgagagactagtggagaaaaatccagacaattaagggatgctcag
caggatgccagagataaaatggaggatattgagcgccaagttagagaattgaaaacaaaa
atttcagccatgaaagaagaaaaagaacagctcagtgctgaaagacaagaacaaattaag
cagagaaccaagttggagcttaaagccaaggatttacaagatgagttggcaggcaatagt
gaacaaaggaaacggttattaaaagagaggcaaaagctgcttgaaaagatagaagaaaaa
cagaaagaactggcagaaacagaaccaaaattcaacagtgtaaaagaaaaagaagagcga
ggaattgctagattggctcaagctacccaggaaagaacggatctttatgcaaagcaaggt
cgaggaagccagtttacatcgaaggaagaaagggacaagtggattaaaaaagagctcaag
tctttagatcaagctattaatgacaagaaaagacagattgctgctatacataaagatttg
gaggacactgaggcaaataaagagaaaaatctggagcagtataataaactggatcaagat
cttaatgaagtcaaagctcgagtagaggaattggacagaaaatactatgaagtaaaaaat
aagaaggatgaattgcagagtgaaagaaattacttgtggagagaggagaatgcagaacag
caagcacttgctgctaaaagagaagatcttgaaaagaagcaacaacttctcagagcagca
acaggaaaggccattttaaatggaatcgacagcataaacaaagtattagaccacttccgt
agaaagggaataaatcagcatgttcaaaatggctatcatggcattgtgatgaataacttt
gaatgtgaaccagctttctacacatgtgtggaagtcactgctgggaacaggttgttttat
cacattgttgattcagatgaagtcagcacgaagattttaatggagtttaataaaatgaat
cttcctggagaggttacttttctgcctcttaacaagttagatgttagagatactgcctat
ccggaaaccaatgatgctattcctatgatcagtaaactgaggtacaatcccagatttgat
aaggctttcaaacatgtgtttggaaagactctcatttgtcggagcatggaagtttcaacc
cagctagcccgtgctttcactatggactgcataaccttggaaggtgaccaagtcagtcat
cggggtgctctaactggaggttattatgacacaagaaagtctcgacttgaattacagaaa
gatgttagaaaagcagaagaggaactaggtgagcttgaagcaaagctcaatgaaaacctg
cgcagaaatattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagacccagcaaaggaaatttaaagcatccagagatagcatattatcagaaatgaag
atgctgaaagagaagaggcagcagtcagagaaaacttttatgcccaagcaacgtagctta
caaagtttggaggcaagtttgcatgcaatggagtccaccagagaatcattgaaagcagaa
ctggggactgatttgctttctcagcttagtctggaagatcagaagagagtagatgcgctg
aatgatgaaattcgtcaacttcagcaggaaaataggcagttgctaaatgaaagaattaaa
ttagaaggtattattactcgagtagagacttacctcaatgagaatctgagaaaacgcttg
gaccaagtagaacaggaacttaatgaactgagagagacagaagggggtactgtccttaca
gccacaacatcagaacttgaagccatcaataaaagagtaaaagataccatggcacgatca
gaagatttggacaattccattgataaaacagaagctggaattaaggagcttcagaagagt
atggaacgctggaaaaatatggaaaaagaacacatggatgctataaatcatgacactaaa
gaactggaaaagatgacaaatcgacagggcatgctactgaagaagaaagaagagtgtatg
aagaaaattcgagaactaggatcattaccccaggaagcatttgaaaagtaccagacactg
agcctcaaacagttgtttcgaaaacttgagcagtgcaacacagaattaaagaagtacagc
catgttaacaaaaaagctttggatcagtttgtaaacttttctgagcagaaagaaaagtta
ataaagcgacaagaagagttggatagggggtacaaatcaatcatggaactgatgaatgta
cttgaacttcgaaaatacgaagctattcagttaactttcaagcaggtatccaagaacttt
agtgaagtattccagaagttagtgcctggaggcaaagctactctggtgatgaagaaagga
gacgtggaaggcagtcagtctcaggatgaaggagaagggagtggtgaaagtgagaggggt
tctgggtcacaaagcagtgtcccatcagttgatcagttcactggtgttggaatcagggtg
tcatttacaggaaaacaaggtgaaatgagagaaatgcagcagctttcaggtggacagaaa
tccctggtagcccttgctctgatttttgccatccagaaatgtgacccagctcctttttac
ttgtttgatgagatcgaccaggctctggatgctcagcacagaaaggctgtgtcagatatg
attatggaacttgctgtacatgctcagtttattacaactacttttaggcctgaactgctt
gaatcagctgacaaattctatggtgtaaagttcagaaataaggttagtcatattgatgtg
atcacagcagagatggccaaagactttgtagaagatgataccacgcatggttaa
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