KEGG   Oryctolagus cuniculus (rabbit): 100354365
Entry
100354365         CDS       T03373                                 
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03013  Nucleocytoplasmic transport
ocu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100354365
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100354365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100354365
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100354365
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 100354365
NCBI-ProteinID: XP_002715132
Ensembl: ENSOCUG00000008810
LinkDB
Position
13:113067555..113130926
AA seq 776 aa
MQGRPLVLAPRRSLLRRDFLDSRGRFLESQPRSDDVNSGPFWPVEPVQTKSQRDGSGLVP
GFAQAAFEASPKGSFWGLPPFELRWRAGTLSAALLGVGAAISMVTAMSGPLAGGSRDILW
RILGWRIISSIVWSVLLLPVCTTVFIIFSSIDLFHPVQWLSDSFSDLYSSYIIFYLLLLS
VVIIIISVFNVEFYTVVPSVPCSRLALIGKVIHPQQLLHSFVHAAMGMVMAWCAAVITKG
QYSFLVVPCTSTESLDHPATQMCLNEYHLFFLLAGAFMGYSYSLLYFVNNMNYLPFPIIQ
QYKFLRFRRSLLLLMKHSCVESLFLTRNFCIVYYFLGHIPKAWISTAMDLHTDERSHRPL
DSVSGLLNISLLYHVWLCGVFLLMTWYISWMLFKIYATEVHVFPVQLPFAEESDECLPKV
LNSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQ
KLILFQEVAATNGRVSSSYPVEPKKLVSPEETAFQTPKSGQVPRPSVPSLVKTSLFSPKL
STPDIASPLGSAFGPSVVDHMAGLFDVNTCCGSPQSPQLIRRGPRLWTSASDQQTTEFSN
PSPYTLLRAEGKAMREPSMVYSWMQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRI
PGSLVDTSYKTLRFAFRASLKTAIYRITTTFGDNLNAVQASAEHQRRLQQFLEFKD
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcagggccgcccccttgttctggcgccccgcaggtccctgcttcgcagggactttttg
gattccagaggccgtttcctggagtcacagccccgttcggatgacgtgaattcggggccg
ttctggcccgtcgagcctgtccagacgaagtcccagagggatggctcagggcttgtgccc
ggctttgctcaggcagcgtttgaggcatccccaaaagggtccttctggggccttcccccc
tttgaactgcggtggcgggcgggcactctgtctgccgcactgcttggagtaggggccgcc
atctccatggtcacggccatgagtgggcccctggccggcgggtcgcgggacatcctgtgg
cgcattttgggctggaggatcatttcaagcattgtttggtcggtgctgcttctacccgtc
tgcaccacggtgtttatcatcttcagcagcattgatttattccatcctgtacaatggctg
tctgattccttcagtgatctctacagttcctatataatcttttacctcctattgctgtca
gtggtaatcataatcataagtgttttcaatgtggagttctacacagtcgtgccttccgtt
ccctgctccagactggccctgataggaaaggtcattcaccctcagcagctcctgcactcc
tttgtccatgcggccatgggaatggtgatggcgtggtgtgctgccgtcatcaccaagggc
cagtacagtttcctcgtggttccctgcaccagtactgagagcttagatcatcctgctaca
cagatgtgcttaaatgagtatcatcttttcttcctgttggctggagcatttatgggctac
agctacagccttctgtactttgttaacaacatgaactacctcccgttccctatcatacag
caatacaagtttctgcgctttaggagatctctgctcttattaatgaaacatagttgtgtg
gaatcactgttcctgaccagaaatttctgcattgtgtattattttcttggccatattccc
aaagcttggattagcactgctatggaccttcacacggatgagcggtctcataggcctctt
gactccgtgagtggcctcttgaatatctcactgctctaccatgtctggctgtgtggagtc
tttctcctgatgacttggtatatctcctggatgctcttcaaaatctatgccacagaggtg
cacgtgttccctgttcagctcccgtttgcagaagagtcagatgaatgcctcccaaaggtt
ttaaacagcaaccctcccctcatcataaagtatttagccttgcaagacctgatgttgctt
tctcaatattctccctcacgaagacaagaagtgtttagccttagccagccaggtggacat
ccccataactggacagctatttcaagggagtgtttgaatcttttaaatgatatgactcag
aaactgattctctttcaagaagttgctgctacgaatggcagagtgtcttcatcgtatcca
gtggaacctaagaaattggtttctccagaagaaactgctttccagactccaaaatctggc
caggtgcctcggccgtcagtgccgtcgttagttaaaacatcgctgttttctccaaagctg
tctacacctgacattgcaagtcccctcgggagtgcatttggcccgagcgtagtggatcac
atggctgggctttttgatgtgaacacttgctgtgggtctccgcagagccctcagctgatc
agaaggggacccaggttatggacctctgcttctgatcaacaaacgacagaattttctaat
ccttctccatataccttacttagagccgagggtaaggcaatgagagagcccagcatggtt
tattcgtggatgcagaataagcgtgaacagattaagaatttcttgtctaaacgagtgctg
ataatgtattttttcagtaagcatccagaggcctccattcaggctgtattttcagatgcc
caaatgcacatttgggcattagaaggtctgtctcacttagtggcggcatcatttacagaa
gatagatttggagttgtgcagaccacactaccagccatccttaatactttgttgacactg
caagaggcagtcgacaagtacttcaagcttcctcatgcctccagcaaaccaccccggatt
ccgggaagccttgtggacacttcttataagacattaaggttcgcattcagagcatccctg
aaaactgccatctatcgaataaccactacgtttggagacaatctgaatgctgtgcaggca
tctgcagaacatcagagaagacttcagcagttcttggagttcaaagactag

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