Oryctolagus cuniculus (rabbit): 100354365
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Entry
100354365 CDS
T03373
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100354365
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100354365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100354365
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100354365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
100354365
NCBI-ProteinID:
XP_002715132
Ensembl:
ENSOCUG00000008810
LinkDB
All DBs
Position
13:113067555..113130926
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AA seq
776 aa
AA seq
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MQGRPLVLAPRRSLLRRDFLDSRGRFLESQPRSDDVNSGPFWPVEPVQTKSQRDGSGLVP
GFAQAAFEASPKGSFWGLPPFELRWRAGTLSAALLGVGAAISMVTAMSGPLAGGSRDILW
RILGWRIISSIVWSVLLLPVCTTVFIIFSSIDLFHPVQWLSDSFSDLYSSYIIFYLLLLS
VVIIIISVFNVEFYTVVPSVPCSRLALIGKVIHPQQLLHSFVHAAMGMVMAWCAAVITKG
QYSFLVVPCTSTESLDHPATQMCLNEYHLFFLLAGAFMGYSYSLLYFVNNMNYLPFPIIQ
QYKFLRFRRSLLLLMKHSCVESLFLTRNFCIVYYFLGHIPKAWISTAMDLHTDERSHRPL
DSVSGLLNISLLYHVWLCGVFLLMTWYISWMLFKIYATEVHVFPVQLPFAEESDECLPKV
LNSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQ
KLILFQEVAATNGRVSSSYPVEPKKLVSPEETAFQTPKSGQVPRPSVPSLVKTSLFSPKL
STPDIASPLGSAFGPSVVDHMAGLFDVNTCCGSPQSPQLIRRGPRLWTSASDQQTTEFSN
PSPYTLLRAEGKAMREPSMVYSWMQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRI
PGSLVDTSYKTLRFAFRASLKTAIYRITTTFGDNLNAVQASAEHQRRLQQFLEFKD
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagggccgcccccttgttctggcgccccgcaggtccctgcttcgcagggactttttg
gattccagaggccgtttcctggagtcacagccccgttcggatgacgtgaattcggggccg
ttctggcccgtcgagcctgtccagacgaagtcccagagggatggctcagggcttgtgccc
ggctttgctcaggcagcgtttgaggcatccccaaaagggtccttctggggccttcccccc
tttgaactgcggtggcgggcgggcactctgtctgccgcactgcttggagtaggggccgcc
atctccatggtcacggccatgagtgggcccctggccggcgggtcgcgggacatcctgtgg
cgcattttgggctggaggatcatttcaagcattgtttggtcggtgctgcttctacccgtc
tgcaccacggtgtttatcatcttcagcagcattgatttattccatcctgtacaatggctg
tctgattccttcagtgatctctacagttcctatataatcttttacctcctattgctgtca
gtggtaatcataatcataagtgttttcaatgtggagttctacacagtcgtgccttccgtt
ccctgctccagactggccctgataggaaaggtcattcaccctcagcagctcctgcactcc
tttgtccatgcggccatgggaatggtgatggcgtggtgtgctgccgtcatcaccaagggc
cagtacagtttcctcgtggttccctgcaccagtactgagagcttagatcatcctgctaca
cagatgtgcttaaatgagtatcatcttttcttcctgttggctggagcatttatgggctac
agctacagccttctgtactttgttaacaacatgaactacctcccgttccctatcatacag
caatacaagtttctgcgctttaggagatctctgctcttattaatgaaacatagttgtgtg
gaatcactgttcctgaccagaaatttctgcattgtgtattattttcttggccatattccc
aaagcttggattagcactgctatggaccttcacacggatgagcggtctcataggcctctt
gactccgtgagtggcctcttgaatatctcactgctctaccatgtctggctgtgtggagtc
tttctcctgatgacttggtatatctcctggatgctcttcaaaatctatgccacagaggtg
cacgtgttccctgttcagctcccgtttgcagaagagtcagatgaatgcctcccaaaggtt
ttaaacagcaaccctcccctcatcataaagtatttagccttgcaagacctgatgttgctt
tctcaatattctccctcacgaagacaagaagtgtttagccttagccagccaggtggacat
ccccataactggacagctatttcaagggagtgtttgaatcttttaaatgatatgactcag
aaactgattctctttcaagaagttgctgctacgaatggcagagtgtcttcatcgtatcca
gtggaacctaagaaattggtttctccagaagaaactgctttccagactccaaaatctggc
caggtgcctcggccgtcagtgccgtcgttagttaaaacatcgctgttttctccaaagctg
tctacacctgacattgcaagtcccctcgggagtgcatttggcccgagcgtagtggatcac
atggctgggctttttgatgtgaacacttgctgtgggtctccgcagagccctcagctgatc
agaaggggacccaggttatggacctctgcttctgatcaacaaacgacagaattttctaat
ccttctccatataccttacttagagccgagggtaaggcaatgagagagcccagcatggtt
tattcgtggatgcagaataagcgtgaacagattaagaatttcttgtctaaacgagtgctg
ataatgtattttttcagtaagcatccagaggcctccattcaggctgtattttcagatgcc
caaatgcacatttgggcattagaaggtctgtctcacttagtggcggcatcatttacagaa
gatagatttggagttgtgcagaccacactaccagccatccttaatactttgttgacactg
caagaggcagtcgacaagtacttcaagcttcctcatgcctccagcaaaccaccccggatt
ccgggaagccttgtggacacttcttataagacattaaggttcgcattcagagcatccctg
aaaactgccatctatcgaataaccactacgtttggagacaatctgaatgctgtgcaggca
tctgcagaacatcagagaagacttcagcagttcttggagttcaaagactag
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