Oryctolagus cuniculus (rabbit): 100354432
Help
Entry
100354432 CDS
T03373
Name
(RefSeq) tetratricopeptide repeat protein 21A isoform X1
KO
K24178
tetratricopeptide repeat protein 21A
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocu03037
]
100354432
Cilium and associated proteins [BR:
ocu03037
]
Motile cilia and associated proteins
Sperm associated proteins
100354432
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21
ARM_TT21_5th
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_11
TPR_12
TPR_8
TPR_1
ANAPC3
TPR_17
TPR_7
CFAP70_TPR_C
TPR_6
TPR_CcmH_CycH
TPR_Slam
RMD1-3
TPR_Psidin_N
CFAP70_mid_TPR
CNOT10_TPR
TPR_15
TPR_21
TPR-S
TPR_9
PRP6_TPR
TPR_YpiA
FAT
PPR
NatA_aux_su
DUF6584
TPR_NPHP3
HAT_PRP39_C
T6SS_VasJ
Motif
Other DBs
NCBI-GeneID:
100354432
NCBI-ProteinID:
XP_051708591
Ensembl:
ENSOCUG00000005473
LinkDB
All DBs
Position
9:111500436..111535798
Genome browser
AA seq
1408 aa
AA seq
DB search
MAAARLGPGVHHGKPDSAPPPWTHPIGARLPAPCHVGFLLRPLLTHRLLATGRLPCFQGR
ASLQLPAARGVPRTLTRESLAPPQQNRTRIRQQPEMNGSDSSVMAVIVHYSLERCFRHVQ
QAAALGLERFSNDPVWHFFRAYGVLREERIQDAISELESIRNHPDVALCSIMALLYAHKC
CETIDREAIEELESSLQETHRTASGSAQYYASLFLWLMGHHDKAKEYLDHTLKASTGSRE
DSVLKGWVDLTSDNPLVVKKSIKYLEQGLQDTKDVLGLMGKARYLMTQQNYSGALEVVNQ
LTVASGSFLPALILKMRLFLAQQDWEQAVETAHRILERDENSIDAYQMLAVHELAREGNM
TTAADHVSNLIKALEMSEPQNPRLHLEKVLVVSRLCGRHQAVLQLVGSFMERIFLATPSY
AQAATELGYLLVLRNQVKEAFLWYSEAMKLDEGSVAALTGIIWCQILEGHLEEAGHQLEF
LKEVQQSLGKSKVLVFLQALLASRKSKGEQEVTALLQEAVELHFCGMRGLPMGCEYFEKL
DPPFLVCVAKEYLLFCPKQPRAPGQIVAPLLNQVTVILTPVVKAAPALLDSMYVMAQIKY
LSGELENAHSTLKCCLELDPTFVDSHLLMAQIYLAQGNFAMCSHCLELGVSHNFQVRDHP
LYHFIKARALNKSGDHAEAIKTLKMIMKLPTVKVEEGKKFRGHPVQPSERVSILLELADA
LRLNGELHEATKVMQDAINEFSGTPEEIRVTIANADLALSKGNADMALSMLRNITPKQPC
YMEAKEKMADIYLRTHKDRSLYVGCYRELCEHLPGPHSSLLLGDAFMSIQQPEKALEVYE
EACRKNPQDASLVSRTGQAYVKTHQYTKAVNYYEAAQKISGQDSVRRHLAELLLKLKQFG
RAEKVLKQALARGGAATDIPSMMKDVECLLLLAKVYKSHRKDDVLETLNKAFDFQSRILK
RIPLEQPEVMPAQKQLAASICIQFGEHYLAEKEYTKAARSYKEALSYSPADTQVMLELAR
IHLLQGNLDLCEQHCATLLQMEQAHETASVLLADLMFRKQKYEAAISLYRQVLEKTPDNF
SVLDKLIDLLRRSGKLEDAPAFFELAMRVSSRMPLEPGFNYCRGIYCWHRGQPNEALKFL
NKARKDSTWGQSATCYMVQICLNPDKEIMGGEALENLSESSAADRKESEQHGLRTAVKLL
LELCPSSALDHTQLRLLQNLCLLATREKANMEAALSTFIEIAQAERDSVPALLAVAQAYM
LLKQVPKARTQLKRLAKAPWVLPEAEDLEKSWLLLADIYCQSGKFDLASELLRRCVQYNK
SCSKAYEYLGFIMEKEQSYKDAATNYELAWKYSHHASPAIGFKLAFNYLKDKKFVEAIEI
CHRVLAEYPNYPKIREEILVKAQVSLKP
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgcggctgggccctggtgtccaccacggcaagccggactcagcgccacca
ccgtggactcaccctatcggcgctcgattacctgcgccttgtcacgtgggcttcttgtta
cgccccctcctgacgcacaggctcttagcaaccggccggctgccctgtttccaaggacgc
gcgagcctccaacttccggccgcgagaggcgtgcccaggaccctgacccgggaatctctc
gcgccgccccagcagaaccggactcggatccgccagcagccggagatgaatggcagtgac
tcctccgtcatggccgtgattgtgcactacagcctggaaaggtgcttccgccacgtgcag
caggccgccgctctgggcctggagaggttcagcaatgaccccgtgtggcacttcttcaga
gcctacggagtcctcagggaagaacgcatccaggatgccatcagcgagctggagagcatc
cggaatcacccggacgtggccctgtgctccatcatggccctgctatacgcccacaaatgc
tgcgagaccatcgaccgagaagcgatcgaggagctggagagcagcctacaggaaacccac
aggacagccagtgggtcggcgcagtactacgccagcctcttcctctggctcatgggccac
cacgacaaggccaaggagtaccttgaccacacactgaaggcctccactggctccagagag
gactctgtgctcaaaggctgggttgacctcacctccgacaaccccctcgtggtgaagaaa
tccatcaagtacctggaacaaggacttcaggacaccaaagacgtgctggggctgatggga
aaggccaggtacctcatgacgcagcagaattactcaggggccctggaggtggtgaaccag
ctcacggtggcctcgggcagcttcctgcctgccctcatcctcaagatgcggctgttcctg
gctcagcaggactgggagcaggcggtagagacggcacacagaatcctggagagggacgag
aacagtattgatgcctaccaaatgctggctgtgcacgagctcgcaagagaaggcaacatg
accactgctgctgatcatgttagcaacctgattaaggcgctggagatgagcgagccccaa
aatccaagactccatctggaaaaagttctggtggttagcaggctgtgtgggaggcaccag
gccgttctccagctggtggggagcttcatggagcgcatcttcctggccaccccctcctac
gcccaggcggccaccgagctgggctacctcctcgtcctgcggaaccaggtgaaggaggcg
tttctgtggtactcagaggccatgaagctggacgagggcagcgtggctgccttgacaggg
atcatctggtgccagatcttggagggccacctggaagaggcggggcaccagctggaattc
ctgaaggaggtgcagcagtccctagggaagtcgaaggtgctggttttcctccaggctctt
ctggcctccaggaagagcaagggggaacaggaggtcacggcgctgctccaggaggccgtg
gagctccacttctgcggcatgcgaggcctccccatgggctgcgagtactttgaaaagctg
gacccgcccttcctggtctgcgtggccaaagagtacttgctcttctgccctaagcagccc
cgggcacccggccagatcgtggctccacttcttaaccaagtcaccgtgatcttgactcct
gtggtcaaggcagcaccagctctgctcgactccatgtatgtgatggctcagatcaagtat
ctctcaggagaactggagaatgcccacagcaccctgaagtgttgcctggagctggacccc
acctttgtggattcccacctcctcatggcccagatctacctggctcaaggcaactttgcc
atgtgctcccactgcttggagctgggtgtcagccacaacttccaggttcgagaccacccc
ctctaccacttcatcaaggccagggcactcaacaagtccggagaccacgcagaggccatc
aagacactgaaaatgatcatgaagctgcccactgtgaaggtggaagaaggcaagaagttc
cgggggcaccctgtgcagcccagcgagcgggtgtccatcctactggaactggcagatgcc
ctccggctgaacggggagctgcacgaggccaccaaggtcatgcaggatgccataaacgag
ttcagcggcacgccggaggagatccgcgtcaccatcgccaacgcggacctggccctgagc
aagggcaacgcggacatggcgttgagtatgctgagaaacatcacgcccaagcagccctgc
tacatggaagccaaggagaagatggccgacatctacctgcgcacccacaaagacaggagc
ctctacgtcggctgctaccgtgagctctgtgaacacctgcctggcccccactccagcctg
ctgctgggcgatgctttcatgagcattcagcagcccgagaaggccctggaagtctacgaa
gaggcctgtagaaagaacccgcaggacgcctccctggtcagcaggaccggacaagcgtac
gtgaagacacaccagtacaccaaggcggttaactactacgaggccgcgcagaagataagt
ggacaggactccgtgcgccgccatctggctgagctgctcctgaagctgaagcagttcggc
agagcggagaaagttctgaagcaggccctggcacgcggcggcgcagccacagacatcccg
tccatgatgaaggatgttgagtgcttgcttttgctggcaaaagtgtacaagagccacagg
aaagacgacgtcttggaaactctgaacaaggcctttgacttccagtctcggatactgaag
cgcattcctctggagcagccggaagtgatgcccgcccagaagcagctggcagcctcgatc
tgcatccagtttggcgagcactacctggcagagaaggagtacaccaaggcggcgcggtct
tacaaggaggctctctcctactctcccgcggacacccaggtgatgctggagctggcacgg
atccacctgcttcaggggaacctggatttgtgcgagcagcactgtgccaccctcctgcag
atggagcaggcccacgagactgcttctgtgctcttggctgacctgatgtttagaaagcag
aaatacgaagcagccatcagtctctaccgccaagtcctggagaaaacgccagacaatttt
tcggtattggataaattgattgacctgctacgaagaagcggcaaacttgaagacgctcct
gccttctttgagttggccatgagagtgtccagccggatgcctctggagccagggttcaac
tactgcagaggcatctactgctggcacagaggacagcccaacgaagccttgaagttccta
aacaaagcgcgcaaggacagcacttggggccagagcgccacctgctacatggtgcaaatc
tgtctgaacccagacaaggagattatgggtggagaggctttggagaacctgtccgagagc
agcgctgccgacaggaaggagtcggagcagcacggcttgcgcacggccgtgaagctgctg
ttggagttgtgcccaagctcggccctggaccacacccagctacggctgctgcagaacctc
tgcctgctggccacccgggagaaagccaacatggaggcggcgctgagcaccttcatcgag
atagcccaggccgagagggacagcgtccccgccctgctggccgtggcgcaggcctacatg
ctgctgaagcaggtccccaaggcgcgcacgcagctgaagcgcctggccaaggccccctgg
gtgctgcccgaggccgaggacctggagaagagctggctcctgctggctgacatctactgc
cagagcggcaagttcgacctggcctcggagctgctgcggcgctgcgtgcagtacaacaag
tcatgcagcaaggcctacgagtacctgggcttcatcatggagaaggagcagtcctacaaa
gacgcggccaccaattacgagctggcctggaagtacagccatcacgccagccccgccatc
ggattcaaactcgctttcaactacttgaaggacaagaaatttgtggaggccattgagatc
tgccacagagtcctcgcggagtaccccaactacccgaagatcagagaagagattctggtg
aaggcgcaagtctccctgaagccctag
DBGET
integrated database retrieval system
