Oryctolagus cuniculus (rabbit): 100354442
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Entry
100354442 CDS
T03373
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X2
KO
K12816
pre-mRNA-processing factor 17
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100354442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100354442
Spliceosome [BR:
ocu03041
]
Complex C
Other components
Step II factors
100354442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WDR54
PQQ_2
Motif
Other DBs
NCBI-GeneID:
100354442
NCBI-ProteinID:
XP_002714958
Ensembl:
ENSOCUG00000001223
UniProt:
G1SF02
LinkDB
All DBs
Position
12:complement(57784538..57836990)
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AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDSEGGRCPLPAAESLMHLTKSPSAKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKLEDEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHIWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgctattgcagctctggccgcttcctacggttcgggttcggggtccgaatcc
gactcggacagtgaaggcggccgatgtccgctgccagccgccgagtctctcatgcatctg
actaaatcgccttcggccaagccctcgctggcagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagactggtgttcaccttgaccctgctgttaaagaagttcag
tataatcctacatatgagacaatgtttgctcctgagtttggaccagaaaatccctttaga
actcagcaaatggctgcccccagaaatatgctttctggatatgctgaaccagctcacatc
aatgacttcatgtttgaacagcagagaagaacttttgccacatatggttatgcactggac
ccttcattagataaccaccaagtgtctgccaaatatattggttctgtagaagaagctgaa
aaaaatcaaggtttaactgtgtttgaaactggtcagaagaaaacagaaaagaggaaaaag
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccgtgggcaaaatatgtg
gatgaaaaagatgtagccaaaccttcagaagaagaacaaaaagagctggatgaaatcaca
gcaaagaggcagaaaaaaggcaaactggaagatgagaaacctggggaggagaagacaatc
ttacatgttaaagaaatgtatgactatcaaggcaggtcctaccttcacatacctcaggat
gttggtgtaaatctacggtcaagtgtgccacctgagaagtgttatcttcccaaaaaacag
attcacatatggtctggacacaccaagggcgtcagtgcagtcagattgtttcctctctct
ggccatttgttgctgtcttgctccatggactgtaaaattaagttgtgggaggtttatgga
gaccgccgctgtctgcgaacatttattggtcacagtaaagccgtaagggacatctgcttc
aacaccgcaggaacacagtttcttagtgcagcctatgacagatacctgaagctctgggac
accgagacgggacagtgtatatcaagatttacaaaccgaaaagtgccctactgtgtcaaa
ttcaatcctgatgaagacaagcaaaatctctttgtggctgggatgtctgataaaaagatt
gtgcaatgggacattcgaagtggagaaattgtgcaggaatatgatcggcatttgggagct
gtcaacaccattgtttttgttgatgaaaacaggagatttgttagtacatctgatgataag
agcctaagagtttgggaatgggacatccctgtggatttcaagtacatagcagaacccagt
atgcactcaatgcctgcagtgactttgtctccaaatgggaaatggctagcatgccaatca
atggacaaccaaatcttaatttttggagcccagaacagatttagattaaataagaaaaaa
atttttaagggccacatggtagcaggttatgcttgtcaggtagacttttcaccagacatg
agctatgtgatttcaggagatggaaatggaaaattaaacatttgggactggaagaccaca
aaactctacagtcggtttaaagctcatgataaagtgtgtataggcgcagtgtggcaccct
catgaaacatctaaagtcataacatgcggctgggatggtctgattaaactgtgggattag
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