KEGG   Oryctolagus cuniculus (rabbit): 100354475
Entry
100354475         CDS       T03373                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03420  Nucleotide excision repair
ocu04120  Ubiquitin mediated proteolysis
ocu05161  Hepatitis B
ocu05170  Human immunodeficiency virus 1 infection
ocu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100354475
  09124 Replication and repair
   03420 Nucleotide excision repair
    100354475
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100354475
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100354475
   05161 Hepatitis B
    100354475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100354475
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100354475
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     100354475
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100354475
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100354475
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 100354475
NCBI-ProteinID: XP_002721069
Ensembl: ENSOCUG00000001667
UniProt: G1SFV7
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcccagaagcccaccgccgtgaacggctgtgtgacc
ggacacttcacttcagctgaagacttgaacctgttgattgccaaaaacacgagattagag
atctatgtggtcaccgcggaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
atcgcagtcatggagcttttcaggcccaagggggagagcaaggacctgctgttcatcctg
acagctaagtacaatgcctgcatcctggagtataagcagagtggtgagagcattgatata
atcacgcgagcccacggcaatgtccaggaccgcattggccgcccctcagagactggcatt
attggcatcatcgaccctgagtgccggatgattggcctgagactctacgacggcctgttc
aaggttattccactagatcgcgacaataaagagctcaaggccttcaacatccgcctggaa
gagctgcatgtcattgacgtcaagttcctttatggttgccaagcacctaccatttgcttt
gtctaccaggaccctcaggggcggcatgtcaaaacctatgaggtatccctccgagagaag
gagttcaacaagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatt
gcagtcccagagccctttggaggggccattatcattggtcaagagtccatcacctatcac
aatggggacaaatacctggcaattgcccctcctatcattaagcaaagcacaatcgtgtgc
cacaatcgggtggaccctaatggttcgagatacctgcttggagacatggaagggcggctc
ttcatgctgcttttggagaaggaggaacagatggatggtacggttaccctcaaggatctc
cgtgtggaactccttggagagacctctattgctgagtgcttgacgtaccttgataatggt
gttgtgtttgttgggtctcgcctgggtgactcccagcttgtgaagctcaacgttgacagc
aatgaacaaggctcttatgtagtagccatggaaacttttactaatttaggacccattgtg
gatatgtgcgtggtggacctggagaggcaggggcagggacagctggtcacttgctctggt
gctttcaaggaaggttccttgcgaatcatccggaacgggatcggaatccacgagcatgcc
agcattgatttaccaggcatcaaaggcttatggccactgcggtctgaccctaatcgtgaa
actgatgatactctggtgctctcttttgtgggccagacaagagttctcatgttaaatgga
gaggaagtagaagaaactgaactgatgggttttgtggacgatcaacagactttcttctgt
ggcaatgtggctcatcaacagcttatccagatcacttccgcatctgtgaggttggtgtct
caagagcccaaggctctggtcagtgagtggaaggagcctcagggcaagaacatcagcgtg
gcctcctgcaacagcagccaggtggtggtggccgttgggagggccctgtactacctgcag
atccaccctcaggagctccggcagatcagccacacagagatggaacatgaagtggcctgt
ttggacattacccccttaggggacagcaatggcctctcccctctttgtgccattggcctc
tggacagacatctctgcccgcatcttgaagctgccctcttttgaactgctgcacaaggag
atgctgggtggagagatcattcctcgctccatcctgatgactacctttgagagtagccac
taccttctctgtgccttgggagatggggcacttttctacttcgggctcaacattgagaca
ggcttgttgagcgaccggaagaaggtgaccttgggcacccagcccacggtgttgagaact
ttccgttccctttctaccaccaacgtctttgcttgctctgaccggcccactgtcatctac
agcagtaaccataaattggtcttctccaacgtcaacctcaaggaagtgaactacatgtgt
ccccttaactcagatggctatcctgacagcctggcactggccaacaacagcaccctcact
attggcaccattgacgagatccagaagctgcacattcgcacagttcccctatatgagtct
cccaggaagatctgctatcaggaagtgtctcagtgctttggggtcctctccagccgcatt
gaagtccaagacaccagtggggggaccactgctctgaggcccagtgccagcactcaggcc
ctgtccagcagcgtcagctccagcaagctcttctccagcagcacggcaccccatgagacc
tcctttggagaagaggtggaggtgcacaacctcctgatcattgaccagcatacctttgaa
gtgcttcatgcccaccagtttctgcagaatgaatatgccctcagcctggtctcctgcaag
ttgggcaaagatcccaacacgtacttcatcgtgggcacagccatggtgtaccctgaagag
gcagagcccaagcaggggcggattgtggtcttccagtattcggatggaaaactgcagacc
gtggctgaaaaggaagtgaaaggagctgtgtactctatggtggaatttaacggcaaattg
ttggccagcatcaatagcacggtgcggctgtatgagtggacgacagaaaaggagctgcgc
accgagtgcaatcactacaacaacatcatggccctgtacctgaagaccaagggcgacttc
atcctggttggcgacctcatgcgctcagtgctgctgcttgcctacaagcccatggaggga
aactttgaagagattgcacgagactttaatcccaactggatgagtgctgtggaaatcttg
gatgatgacaatttcttgggagctgagaatgcctttaacttgtttgtgtgtcagaaggat
agtgccgccactactgacgaggagcggcagcaccttcaggaggttgggctcttccacctg
ggcgagtttgtcaatgtgttctgccacggctctctggtcatgcagaacctgggcgagact
tccactcccacacagggctcagtacttttcggcacggtcaacggcatgattgggctggtg
acctcgctgtcagagagctggtacaacctgctgctggacatgcagaatcgactcaataaa
gtcatcaagagcgtgggcaagattgaacactccttctggagatccttccacactgaacgc
aagacagagccggccacaggctttattgatggtgacctgattgagagtttcttggatatc
agccgcccgaagatgcaggaggttgtggcaaacctacagtacgacgatggcagtggcatg
aagcgagaggccactgcagatgacctgatcaaggttgtggaggagctgacacggatccat
tag

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