Oryctolagus cuniculus (rabbit): 100354514
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Entry
100354514 CDS
T03373
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04820
Cytoskeleton in muscle cells
ocu05410
Hypertrophic cardiomyopathy
ocu05412
Arrhythmogenic right ventricular cardiomyopathy
ocu05414
Dilated cardiomyopathy
ocu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100354514
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100354514
05412 Arrhythmogenic right ventricular cardiomyopathy
100354514
05414 Dilated cardiomyopathy
100354514
05416 Viral myocarditis
100354514
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
SOS1_NGEF_PH
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
100354514
NCBI-ProteinID:
XP_002710802
Ensembl:
ENSOCUG00000016211
UniProt:
G1TB55
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Position
3:complement(136082576..136386212)
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AA seq
540 aa
AA seq
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MAVAAAAAAAAAGPAGGGSGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAAYN
GIGAATNGSFCRGAGAGHPGAGSAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQ
ELGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQ
ALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGSSSDPLSSQSFSFH
RDRKSIPLKMCYVTRSMALADPENRQLEIHSPDTKHTVILRSKDTATAQAWFSAIHSNVS
DLQSRVMAEVREQLGKAGIAGSREIRHLGWLAEKVPGESEKQWKPSLVVLTEKDLLIYES
MPRRKEAWFSPVHSYPLLATRLVHSGPGKGSPPVGADLSFATRTGTRQGIETHLFRAEIS
RDLSHWTRSIVQGCHNSAELITEITTACTYKNQECRLTIHYENGFSITTEPQEGAFPKTI
IQSPYEKLKMSSDDGIRMLYLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcggcggcggcggcggcggctgggccggcaggcgggggaagcggc
cgggcgcagcggagcgggctgctggaagttttggtgcgggatcgctggcacaaagttctg
gtgaacttgagcgaagacgccctggttctgagctgcgaggagggcgctgcggcgtacaac
ggcatcggggcagccaccaatggctcgttctgcaggggtgccggggccgggcacccgggc
gcgggcagcgcgcagcccccggactcgcccgccggtgtccgcacggccttcaccgacctc
ccggagcaggtgcccgagtccatctctaaccagaagcgcggcgtgaaggtgctgaagcag
gagttgggcggtttgggcattagcattaaggggggcaaagagaacaagatgcccatcctc
atcagcaagatcttcaaggggctggcggcggaccagacccaagctctgtacgtgggcgac
gccatcctatcggtgaacggagccgacctgcgggatgctacccacgacgaggcggtgcag
gctctgaagcgcgcaggcaaggaggtgctgctggaagtcaagtacatgcgggaagctacg
ccctatgtgaagaaaggatcgcctgtgtcagagatcgggtgggaaacgccaccacctgag
tcccctcggttaggaggcagctcctcggaccctctgtcatcacagtctttctccttccat
agagaccggaaaagcatccccctcaaaatgtgctacgtcactcggagtatggctttggct
gaccctgagaaccggcaacttgaaatccactctccagatactaagcacacagtgatccta
aggagcaaggacacagccactgcccaggcttggttcagtgctatccattccaacgttagt
gacctgcagagccgagtgatggcagaggtcagagagcagctggggaaagcgggcattgct
gggagccgagagatcagacatcttggctggcttgcagaaaaggtgccaggggagagtgag
aaacagtggaaaccatccctggttgtactgactgaaaaggatcttctaatctatgagagc
atgccacggaggaaggaagcctggttcagcccagttcactcctaccctcttcttgccacc
aggctggtccattcaggtccagggaagggatcacccccggttggtgcagatctgtctttt
gcaacgcgaactggtaccagacaagggattgaaacacatctcttcagggcagagatcagc
agggacctctctcattggacgaggagtatagtacagggttgccacaactcagctgaactc
attactgaaataaccacagcttgcacctacaaaaaccaggagtgccgtttgaccatacat
tatgagaatggattttctattaccactgaacctcaagagggtgcctttcccaagacaatc
atacagtctccttatgaaaaactgaaaatgtcctcagatgacggaatcaggatgctgtac
ttagattttggtggcaaagaaggagagattcaactggaccttcactcctgccccaagccc
atcgttttcatcattcattccttcttgtcagctaagattacaagactgggcttggtggcc
tga
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