KEGG   Oryctolagus cuniculus (rabbit): 100354694
Entry
100354694         CDS       T03373                                 
Name
(RefSeq) tapasin isoform X2
  KO
K08058  TAP binding protein (tapasin)
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04612  Antigen processing and presentation
ocu05163  Human cytomegalovirus infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    100354694
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100354694
   05168 Herpes simplex virus 1 infection
    100354694
   05163 Human cytomegalovirus infection
    100354694
   05169 Epstein-Barr virus infection
    100354694
SSDB
Motif
Pfam: C1-set ig
Other DBs
NCBI-GeneID: 100354694
NCBI-ProteinID: XP_008261005
Ensembl: ENSOCUG00000010563
UniProt: G1SZK1
LinkDB
Position
12:132039683..132051581
AA seq 449 aa
MKPLSLLVAVALGLVTRVSAGPAVIECWFVEDARGGGLNKRPAALLLRQGPGGPPPRPDL
DPELYLSVHDPAGALQGAFRRYPRDAPAPHCEMTRFVPLPASAKWASRLTPEQDCPRALD
GAWLMVSVSSPVLSLSSLLRPQPEPQPEPALITMATAVLTVLTHTPAPRVRLGRDAMLDL
SFAYMPPTPAAATSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAA
WDDDEPSGPWTGNGTFWLPAVRPFQEGTYLATVHLPYLQGQVTLELAVHKPPTVSLKPAP
VVWAAPGEAPPELLCLVSHFYPSEDLEVEWELRGGAEGGSRKVGGQSWLSALRHHSDGSV
SLSAHLRPPPVSAEQHGARYACRVLHPSLPASGRSAEVTLEVAGLSGPSLEDSVGLFLSA
FFLLGLIKALGWVAACRSTRPGSEEKKTQ
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgaagcccctgtccctgctcgtcgccgtggctttgggcctggtgacccgcgtctcggct
ggacccgcggtgatcgagtgctggttcgtggaggacgcgcgcgggggcggcctgaacaag
aggcccgcggcactgctgctgcgccagggacccgggggaccgccgccccggccggacctc
gaccctgagctctacctcagcgtgcacgatcccgcgggcgccctgcaaggcgccttcagg
cggtatccccgagacgcccctgcgccccactgcgagatgacccgcttcgtcccgctcccg
gcctccgccaagtgggccagccgcctgaccccggagcaggactgcccgcgggccctggac
ggggcttggctgatggtcagcgtgtccagcccggtcctcagcctctccagcctcctgcga
cctcagccggagcctcagccggagccggctctcatcaccatggcaacagcggtactgacc
gtcctcacccacacccctgcccctcgagtccgtctgggacgagacgccatgctggacttg
agcttcgcctacatgcccccaacccctgcagctgctacctcgctggccccaggccctcct
ccctttggactcgagtggcgacgccagcacctgggtaaggggcacctgctcctggctgca
actcctgggctgaatgggcagatgccagctgcccaggagggggcggtggcattcgctgct
tgggacgatgatgagccctcaggcccatggaccggaaatgggaccttctggctgcctgca
gtgcggccctttcaggagggcacctacctggccaccgtacacctgccataccttcaaggg
caggtcaccctggagcttgctgtgcacaagccccccacggtgtccctgaagcccgctccc
gtcgtgtgggctgcccccggggaggcacccccggagttgctctgcctcgtgtcccacttc
tacccttccgaggacctggaggtggagtgggagctccggggcggcgccgagggcggctcg
cggaaggtcggggggcagagctggctctccgccctgcgccaccattccgacggctccgtc
agcctctccgcgcacctgcggccgcctccggtcagcgccgagcagcacggggcgcgctac
gcctgccgcgtcctccaccccagcctgcctgcctcggggcgcagcgccgaggtcaccctg
gaggtggcaggtctctcggggccctcgctggaggacagcgtcggccttttcctgtctgct
ttcttcctcctcggactcatcaaggcgctgggctgggtcgctgcctgccggtccactcgt
ccgggttcagaggagaagaaaacccagtga

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