| Entry |
|
|---|
| Name |
(RefSeq) transient receptor potential cation channel subfamily V member 2 isoform X1
|
|---|
| KO |
| K04971 | transient receptor potential cation channel subfamily V member 2 |
|
|---|
| Organism |
ocu Oryctolagus cuniculus (rabbit)
|
|---|
| Pathway |
| ocu04621 | NOD-like receptor signaling pathway |
| ocu04750 | Inflammatory mediator regulation of TRP channels |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:ocu00001]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100354812
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100354812
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:ocu04040]
100354812
Ion channels [BR:ocu04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100354812
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
19:1744588..1767540
|
|---|
| AA seq |
762 aa
MTSPSSPPAFRLETSDGGQDGAEVDKAQLGYGAGPPPMESRFQDEDRNFPPQIKVNLNYR
KGAGASQPDLNRFDRDRLFNVVARGNPEDLAGLLEYLRRTSKYLTDSEYTEGSTGKTCLM
KAVLNLQDGVNACIQPLLEIDRDSGNPQPLVNAQCTDEYYRGHSALHIAIEKRSLQCVKL
LVENGANVHAKACGHFFQKNQDTCFYFGELPLSLAACTKQWDVVNYLLENPHQPASLQAQ
DSLGNTVLHALVMIADDSAENSALVVRMYDGLLQAGARLCPNVQLEGIPNLEGLTPLKLA
AKEGKIEIFKHILQREFSAPCQSLSRKFTEWCYGPVRVSLYDLASVDSWEENSVLEIIAF
HSRSPHRHRMVVLEPLNKLLQAKWDRLIPRFCFNFLCYLVYMLIFTAVAYHQPALEKQGF
PPLKATAGNSMLLLGHILILLGGVYLLLGQLWYFWRRRLFIWISFMDSYFEILFLLQALL
TVLSQVLCFLAIEWYLPLLVSSLVLGWLNLLYYTRGFQHTGIYSVMIQKVILRDLLRFLL
VYLVFLFGFAVALVSLSREAQNSRTPAGPNATEVGQPGAGQEDEAPPYRSILDASLELFK
FTIGMGELAFQEQLRFRGVVLLLLLAYVLLTYVLLLNMLIALMSETVNSVATDSWSIWKL
QKAISVLEMENGYWWCRRKKQRAGVMLTVGTRPDGSPDERWCFRVGEMNWATWEQTLPRT
LCEEPSGAAAPGVMKNPTPASQRGEDSASEEDHLPLQLLQSR |
|---|
| NT seq |
2289 nt +upstreamnt +downstreamnt
atgacctcaccctccagccctccagctttccggctggagacgtcagatggaggccaagat
ggcgctgaggtggacaaggcgcagctgggctatggggcggggccgcctcccatggagtca
cggttccaggacgaggaccgcaacttccctcctcagatcaaagtgaacctcaactacaga
aagggtgcgggtgccagccagccggacctgaatcgctttgaccgtgaccggctcttcaac
gtggttgcccggggcaaccccgaggatctggccgggctactagagtatctacgccggacc
agcaagtacctcaccgactcagagtacacagagggctccacggggaagacgtgtctgatg
aaggcagtgctgaatcttcaggatggggtcaacgcctgcatccagccgctgctggagatt
gacagggactctggcaatccccagcccctggtgaacgcccagtgcacggatgagtactac
cgaggccacagcgccctgcacattgccatcgagaagaggagcctgcagtgcgtgaaactc
ctggtggagaatggagccaatgtgcacgccaaggcctgtgggcacttcttccagaagaac
caagacacctgcttctattttggcgagctgcccctttctctggccgcatgcaccaagcag
tgggacgtggtgaactacctcctggagaacccgcaccagcccgccagcctgcaggcccag
gactccctgggcaacacagtgctgcacgccctggtgatgatcgccgacgactcggccgag
aacagcgccctggtggtccgcatgtatgacgggctgctgcaggcaggggcccgcctctgc
cccaacgtgcagctggagggcatccccaaccttgagggcctcacacccctgaagctggct
gccaaggagggaaaaatcgagattttcaagcacatcttgcagcgggagttctcggccccg
tgccagtccctttctcgaaagttcactgagtggtgctacgggcccgtccgggtgtcactg
tacgacttggcctctgtggacagctgggaggagaactccgtgctggagatcatcgccttt
cattccaggagcccgcaccgccaccgcatggtggttttggagcctctcaacaagctgctg
caggcgaaatgggatcggctcatccccaggttctgcttcaacttcctgtgttacctggtc
tacatgctcatcttcaccgccgtggcctaccaccagccagccctggagaagcagggcttc
ccacccctgaaagccacagccgggaactccatgctgcttctgggccacattctgatcctg
ctcgggggcgtctacctcctcctaggacagctctggtacttctggcgccgccgcctgttc
atctggatctccttcatggacagctactttgaaatcctcttcctgctccaagccctgctc
acggtgctgtcccaagtgctgtgcttcctggccatcgagtggtacctgcccctgctggtg
tcctcgctggtgctgggctggctgaacctgctgtactacacacgtggctttcagcacacc
ggcatctacagcgtcatgatccagaaggtcatcctgcgggacctgctccgcttccttctg
gtctacttagtcttccttttcggctttgctgtagccctggtgagcctgagccgggaggcc
cagaactctaggacccccgcaggccccaacgccacagaggtgggccagcctggcgcgggg
caggaggacgaggcacccccttaccgcagcatcctggacgcctccttggagctgttcaag
ttcaccatcggcatgggcgagctggccttccaggagcagctgcgcttccgcggggtggtg
ctgctgctgctgctggcctacgtgctgctcacctacgtgctgctgctcaacatgctcatt
gccctcatgagcgagaccgtcaacagcgtcgccactgacagctggagcatctggaagctg
cagaaagctatctctgtcctggagatggagaatggctactggtggtgcaggaggaagaag
cagcgggcaggcgtgatgctgacagtgggcaccaggccggacggcagccctgatgagcgc
tggtgctttagggtgggagaaatgaactgggctacgtgggagcagacgctgccgaggacc
ctgtgtgaggagccatccggggcagcagcgcctggcgtgatgaagaaccccactccagcc
tcgcagcgcggggaggacagtgcctcggaggaagaccatctgccccttcagctgctccag
tcccgctga |
|---|
