Oryctolagus cuniculus (rabbit): 100354812
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Entry
100354812 CDS
T03373
Name
(RefSeq) transient receptor potential cation channel subfamily V member 2 isoform X1
KO
K04971
transient receptor potential cation channel subfamily V member 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04621
NOD-like receptor signaling pathway
ocu04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100354812
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100354812
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100354812
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100354812
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
100354812
NCBI-ProteinID:
XP_017204533
Ensembl:
ENSOCUG00000005296
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Position
19:1744588..1767540
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AA seq
762 aa
AA seq
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MTSPSSPPAFRLETSDGGQDGAEVDKAQLGYGAGPPPMESRFQDEDRNFPPQIKVNLNYR
KGAGASQPDLNRFDRDRLFNVVARGNPEDLAGLLEYLRRTSKYLTDSEYTEGSTGKTCLM
KAVLNLQDGVNACIQPLLEIDRDSGNPQPLVNAQCTDEYYRGHSALHIAIEKRSLQCVKL
LVENGANVHAKACGHFFQKNQDTCFYFGELPLSLAACTKQWDVVNYLLENPHQPASLQAQ
DSLGNTVLHALVMIADDSAENSALVVRMYDGLLQAGARLCPNVQLEGIPNLEGLTPLKLA
AKEGKIEIFKHILQREFSAPCQSLSRKFTEWCYGPVRVSLYDLASVDSWEENSVLEIIAF
HSRSPHRHRMVVLEPLNKLLQAKWDRLIPRFCFNFLCYLVYMLIFTAVAYHQPALEKQGF
PPLKATAGNSMLLLGHILILLGGVYLLLGQLWYFWRRRLFIWISFMDSYFEILFLLQALL
TVLSQVLCFLAIEWYLPLLVSSLVLGWLNLLYYTRGFQHTGIYSVMIQKVILRDLLRFLL
VYLVFLFGFAVALVSLSREAQNSRTPAGPNATEVGQPGAGQEDEAPPYRSILDASLELFK
FTIGMGELAFQEQLRFRGVVLLLLLAYVLLTYVLLLNMLIALMSETVNSVATDSWSIWKL
QKAISVLEMENGYWWCRRKKQRAGVMLTVGTRPDGSPDERWCFRVGEMNWATWEQTLPRT
LCEEPSGAAAPGVMKNPTPASQRGEDSASEEDHLPLQLLQSR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaccctccagccctccagctttccggctggagacgtcagatggaggccaagat
ggcgctgaggtggacaaggcgcagctgggctatggggcggggccgcctcccatggagtca
cggttccaggacgaggaccgcaacttccctcctcagatcaaagtgaacctcaactacaga
aagggtgcgggtgccagccagccggacctgaatcgctttgaccgtgaccggctcttcaac
gtggttgcccggggcaaccccgaggatctggccgggctactagagtatctacgccggacc
agcaagtacctcaccgactcagagtacacagagggctccacggggaagacgtgtctgatg
aaggcagtgctgaatcttcaggatggggtcaacgcctgcatccagccgctgctggagatt
gacagggactctggcaatccccagcccctggtgaacgcccagtgcacggatgagtactac
cgaggccacagcgccctgcacattgccatcgagaagaggagcctgcagtgcgtgaaactc
ctggtggagaatggagccaatgtgcacgccaaggcctgtgggcacttcttccagaagaac
caagacacctgcttctattttggcgagctgcccctttctctggccgcatgcaccaagcag
tgggacgtggtgaactacctcctggagaacccgcaccagcccgccagcctgcaggcccag
gactccctgggcaacacagtgctgcacgccctggtgatgatcgccgacgactcggccgag
aacagcgccctggtggtccgcatgtatgacgggctgctgcaggcaggggcccgcctctgc
cccaacgtgcagctggagggcatccccaaccttgagggcctcacacccctgaagctggct
gccaaggagggaaaaatcgagattttcaagcacatcttgcagcgggagttctcggccccg
tgccagtccctttctcgaaagttcactgagtggtgctacgggcccgtccgggtgtcactg
tacgacttggcctctgtggacagctgggaggagaactccgtgctggagatcatcgccttt
cattccaggagcccgcaccgccaccgcatggtggttttggagcctctcaacaagctgctg
caggcgaaatgggatcggctcatccccaggttctgcttcaacttcctgtgttacctggtc
tacatgctcatcttcaccgccgtggcctaccaccagccagccctggagaagcagggcttc
ccacccctgaaagccacagccgggaactccatgctgcttctgggccacattctgatcctg
ctcgggggcgtctacctcctcctaggacagctctggtacttctggcgccgccgcctgttc
atctggatctccttcatggacagctactttgaaatcctcttcctgctccaagccctgctc
acggtgctgtcccaagtgctgtgcttcctggccatcgagtggtacctgcccctgctggtg
tcctcgctggtgctgggctggctgaacctgctgtactacacacgtggctttcagcacacc
ggcatctacagcgtcatgatccagaaggtcatcctgcgggacctgctccgcttccttctg
gtctacttagtcttccttttcggctttgctgtagccctggtgagcctgagccgggaggcc
cagaactctaggacccccgcaggccccaacgccacagaggtgggccagcctggcgcgggg
caggaggacgaggcacccccttaccgcagcatcctggacgcctccttggagctgttcaag
ttcaccatcggcatgggcgagctggccttccaggagcagctgcgcttccgcggggtggtg
ctgctgctgctgctggcctacgtgctgctcacctacgtgctgctgctcaacatgctcatt
gccctcatgagcgagaccgtcaacagcgtcgccactgacagctggagcatctggaagctg
cagaaagctatctctgtcctggagatggagaatggctactggtggtgcaggaggaagaag
cagcgggcaggcgtgatgctgacagtgggcaccaggccggacggcagccctgatgagcgc
tggtgctttagggtgggagaaatgaactgggctacgtgggagcagacgctgccgaggacc
ctgtgtgaggagccatccggggcagcagcgcctggcgtgatgaagaaccccactccagcc
tcgcagcgcggggaggacagtgcctcggaggaagaccatctgccccttcagctgctccag
tcccgctga
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