KEGG   Oryctolagus cuniculus (rabbit): 100354945
Entry
100354945         CDS       T03373                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X2
  KO
K15361  WD repeat-containing protein 48
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100354945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100354945
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     100354945
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IP5PC_F WDR54 Beta-prop_DCAF4 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 100354945
NCBI-ProteinID: XP_008258502
LinkDB
Position
9:111446727..111492157
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPAPAIWVATTKSTVNKWTLKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacggccgggcggagaaaagtgcaggtttcctatgtg
atccgagacgaggtggagaagtacaaccgcaacggggtcaacgccctgcagctggacccg
gcactaaacagactgttcacggccggccgggactccatcataaggatatggagcgtcaac
cagcacaagcaagatccgtatatagcgtccatggagcatcatacagactgggtcaacgac
atcgtgctctgctgcaacgggaagacgttaatatctgcttcttctgacacaacagtaaaa
gtatggaatgcacataagggcttttgcatgtcaacattgaggacacataaggattatgtg
aaggccttagcatacgccaaggataaagaactggtagcctcggctgggttggacagacaa
atattcctttgggatgtgaatactctaacagcgttgactgcctcaaataacactgtcaca
acttcttctttaagcgggaacaaagattccatttatagcctggccatgaatcagctggga
accatcatcgtatcagggtccactgagaaggttttaagggtgtgggatcccaggacatgt
gcaaaactcatgaagctcaaagggcacacggataatgtgaaagcattgctgttgaacaga
gatggcacacagtgcctctccgggagctccgacgggacgattcgcctgtggtccctcggc
cagcagagatgcatcgccacgtaccgagtccacgatgaaggcgtctgggccctgcaggtc
aacgatgccttcacacacgtgtattctgggggaagggacaggaagatttactgtacggac
ctgagaaaccctgacattcgcgtgctaatttgtgaagaaaaagcaccagttctcaagatg
gagctcgataggtcagccgaccccgcccctgccatctgggtggcgacaactaagtctaca
gtgaacaagtggacgttgaaaggaatccataatttcagagcatcaggagattacgacaat
gactgcacaaaccctataacgcccctttgcacgcagcctgaccaggttattaaagggggt
gccagtattattcagtgccacattcttaatgataagagacatatattaaccaaagataca
aataataatgtggcatactgggatgtattgaaggcatgtaaggttgaagatcttggcaaa
gtggattttgaagatgaaattaagaaaagatttaaaatggtctatgtgccaaattggttc
tcggtagacttgaaaacagggatgttgacgatcaccctggatgagagtgactgctttgct
gcctgggtttctgcaaaagatgctggcttcagcagccctgacgggtcagacccaaaactg
aacttaggaggccttttactccaagcactcctagaatattggcctagaactcatgtgaat
ccaatggatgaagaagaaaatgaagtcaaccacgtcaacggggagcaggagaaccgagtg
cagaagggcaacggctacttccaggtgcccccccacacgcccgtcatctttggcgaagct
ggaggccgcacgctcttcaggctgctctgccgagactccgggggcgagactgagtccatg
ctgctcaatgagacagtgccgcaatgggtaattgacatcactgtggacaaaaatatgccc
aaattcaacaaaattcctttctacctccaacctcatgcatcttcaggagcaaaaacctta
aaaaaagataggctgtctgctagtgacatgctccaagtccggaaagtcatggaacatgtg
tatgagaaaatcatcaacttggacaatgagtctcaaaccactagctcttctaataacgaa
aaaccaggagaacaggagaaagaggaggacattgctgtgttggcagaggagaaaatcgaa
cttttatgccaggatcaggttctggatccgaatatggaccttcgaacagtgaaacacttc
atatggaaaagcggtggggacctcaccctccactaccgtcagaagtccacgtga

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