Oryctolagus cuniculus (rabbit): 100354979
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Entry
100354979 CDS
T03373
Name
(RefSeq) next to BRCA1 gene 1 protein isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04137
Mitophagy - animal
ocu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100354979
04137 Mitophagy - animal
100354979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100354979
03029 Mitochondrial biogenesis [BR:
ocu03029
]
100354979
Membrane trafficking [BR:
ocu04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
100354979
Pexophagy
Other pexophagy associated proteins
100354979
Aggrephagy
Cargo receptors
100354979
Xenophagy
100354979
Other autophagy associated proteins
Midbophagy
100354979
Mitochondrial biogenesis [BR:
ocu03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
100354979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
PB1
UBA_NBR1_C
ZZ
Motif
Other DBs
NCBI-GeneID:
100354979
NCBI-ProteinID:
XP_002719466
Ensembl:
ENSOCUG00000025171
UniProt:
G1TYC7
LinkDB
All DBs
Position
19:41310840..41346216
Genome browser
AA seq
949 aa
AA seq
DB search
MELQVTLNVTFKNETQSFLVSDPENTTWADVEAMVKVSFDLNTIQIKYLDEENEEVSINS
QGEYEEALKMAVKQGNQLQMRVHEGHHVVEEAPLPVAEKRAARMGKKPPAHCSSLVRVLG
SDTKNSEAPAAQLFPLAPCDTDQPQDKPPDWFTSYLETFREQVVKETVEKLEQRLHEKLV
LQNPSLASCSSEVSMPVSEETVFLPENQFSWHIACSSCQRRIIGVRYQCSLCPSYNICED
CEAGSYAHDTNHVLLKLRRPIVSSSEPFSHSKYSPRLPAALEQVRLQKQVDKNFLKAEKQ
RLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSHTLMLPLQP
CAPVMPTLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLAS
AEKKDVLVPCLKAGHVGVVSVEFIAPALEGMYTSHWRLSHKGQQFGPRVWCSIIVDPFPS
AESPDNIERDVISSGKADDLTCQQEEAFLLAKEESQLGAETGKCVMQKTEHVASERELYI
PSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIQE
ESEGAGFKALPDSAASTKRKSENMTSVEEAEEDLSGTQFVCETVIRSLTLDAAPDHNPPC
RQKSVQMKFALPEEGLPGDEKEEIVHVAEDEVVEEEEEDELKDEVQSQSSASSEDYIIIL
PECFDTSRPLGDSMYSSALSQPGLERGAEGEPGIEAGQEPAEAGERLPAGENQPPEHSIS
DILMTSQTLETVPLIPEVVGLPPPLPRSPLCVHHGSPEVDLPVTVPEVCSVPDQIRGEPR
GSSGLVNSRQKSYDHSRHQPGGSIAGGLVKGALSVAASAYKALFAGPPVTAQPIISEDQT
AALMAHLFEMGFCDRQLNLRLLRKHNYNILEVVTELLQLNNNDWYSHRY
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaactacaagttactctaaatgtcacttttaaaaatgagactcaaagctttctggtg
tctgatccagaaaatacaacttgggctgatgtggaagctatggtgaaagtttcatttgat
ctgaacactattcaaataaaatacctggatgaggaaaatgaagaggtgtccatcaacagt
caaggagaatatgaagaagcacttaagatggcagtcaagcagggaaatcagctgcagatg
cgagtccatgaagggcaccatgttgttgaggaagcccctcttccagtggcggaaaaacga
gctgcccgaatggggaagaagccacctgcacattgttcttcactagtgagagtcttggga
tcagacacaaagaactcagaggctcctgcagcacagttgtttccacttgctccatgtgac
acagaccagcctcaagacaagcccccagactggttcacaagctacctggagaccttcaga
gaacaggtcgttaaagaaacagtcgagaagcttgaacagagattacatgagaaacttgtc
ctccagaacccatccttggcttcctgttcctcagaagtctcaatgcctgtttcagaggaa
acagtgtttttgccagaaaaccagttcagctggcatattgcttgcagcagttgccaaaga
aggatcattggtgtgcgctaccagtgtagcctctgcccatcctataacatctgtgaagac
tgtgaagcaggatcatatgcccatgacactaaccacgttctgctcaagttgaggagacct
attgtgagttcctctgaaccattctcccactcaaagtattctcctcgtctcccagccgcc
ctggaacaagtgaggcttcagaaacaggttgataagaactttcttaaagcagaaaagcag
aggttgcgagctgagaagaaacagcgtaaagcagaagtcaaggaacttaaaaagcagctt
aaactccacaggaagattcatctgtggaattcaatccatggactgcagagccccaagtct
cctctgggccgacctgagagcttgctccagtcccacaccttgatgctccccttgcagccc
tgtgccccagtcatgccaacactcagtgcagcgtttgtggatgagaatttgcctgatgga
actcaccttcagccaggaaccaagtttattaaacactggaggatgaaaaatacaggaaat
gtaaagtggagtgcagacacaaagctcaagttcatgtggggaaatctgactttggcctct
gcagaaaagaaggatgttttggttccctgcctaaaggctggccatgtgggagttgtgtct
gtggagttcatcgccccagccttggagggaatgtacacttctcattggcgtctttctcac
aaaggccagcaattcgggcctcgtgtctggtgcagtatcatagtggatcctttcccttct
gctgagagtcctgataacattgaaagggacgtgatcagctcaggcaaagctgatgacctc
acctgccagcaagaggaagcttttcttctggctaaagaagaaagtcagcttggtgccgag
acagggaagtgtgtcatgcagaagacagaacatgtcgccagcgagagggagctctacatc
ccatccgtggaccttctgactgctcaggacctgctgtcctttgaactgttggatataaac
attgtccaagagttggagcgagtaccccacaacacccctgtggatatgactccctgcatg
tctcctctgccacatgacagtcctttaatagagaagccaggcttggggcagatacaggaa
gagagtgaaggggcgggatttaaagcgcttcctgattccgcagcgtccacaaagaggaag
tctgagaacatgacttctgtggaagaagcagaggaagacctgagtggaacccagtttgtg
tgtgagactgtcatccggtcccttaccttggatgcggccccagatcacaacccaccttgc
aggcagaagtccgtgcagatgaaatttgccttgcctgaagagggactacctggagatgag
aaggaggagattgtccatgtcgctgaggacgaagttgtggaggaggaggaggaggatgag
ctcaaagacgaagttcagagtcagtcctctgcttcttcagaggactacatcatcatcctg
cccgaatgttttgataccagccgccccctgggggactccatgtacagctctgcactttca
cagccaggcctggagcgaggggctgaaggcgagcctgggattgaggctggacaggaacca
gctgaggctggggagagactccctgcaggggagaaccagccaccggaacatagcatcagt
gacatcctcatgacctcacagactttagaaacagtgcccctgatcccagaggtggtaggg
ctgccaccaccactgcccaggagccctctctgtgtacatcatggttccccggaagtggat
ttaccagtgactgtaccagaagtctgctctgtccctgatcagatccgaggagagcccaga
ggctcatcaggacttgtaaacagcagacagaagagctatgaccactcaaggcaccagcct
gggggcagcattgctggaggactggtgaaaggggccctgtctgttgctgcttctgcatac
aaggccctgtttgctgggccaccggtcactgcacagccaataatttctgaagatcagaca
gcagccctgatggcccatctctttgaaatgggattctgtgacaggcagctgaacctgagg
ctgctgaggaaacacaattacaacattctggaggttgtgacggaactccttcagctcaac
aacaatgactggtacagccaccgctactga
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