Oryctolagus cuniculus (rabbit): 100354982 Help Entry 100354982         CDS       T03373                                  Name (RefSeq) histone deacetylase 6 isoform X2   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04613   Neutrophil extracellular trap formation ocu05014   Amyotrophic lateral sclerosis ocu05034   Alcoholism ocu05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:ocu00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     100354982  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     100354982   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     100354982   09165 Substance dependence    05034 Alcoholism     100354982  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:ocu01009]     100354982   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ocu03019]     100354982    04131 Membrane trafficking [BR:ocu04131]     100354982    03036 Chromosome and associated proteins [BR:ocu03036]     100354982 Enzymes [BR:ocu01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      100354982 Protein phosphatases and associated proteins [BR:ocu01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      100354982 Messenger RNA biogenesis [BR:ocu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      100354982 Membrane trafficking [BR:ocu04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     100354982 Chromosome and associated proteins [BR:ocu03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      100354982 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  100354982 NCBI-ProteinID:  XP_008270807 Ensembl:  ENSOCUG00000010141 UniProt:  A0A5F9DTS2 LinkDB All DBs Position X:33454143..33475508 Genome browser AA seq 1257 aa AA seqDB search METKSSGTRGPTGRREVGGGRRGRSLSSGPRLESGSGRIGRHRQQGRENRTRAEISPTMS STGPESTTARSRRSRHNPQSSPHDSSGTPKRSVKKGALPRCSPNLLEIKKKGKMKKLSQA AEEYLITGLQELDLDSEAKTPAGTGLVFDDQLNEFHCLWDDSFPEGPERLHAIKEQLIQE GLLDRCVSFHARFAEKEELMLVHSLEYIDLMESTQYMKEGELRVLADTYDSVYLHPNSYS CACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH GIQRVLIVDWDIHHGQGTQFMFDQDPSVLYFSIHRYEQGRFWPHLPASNWSTTGFGQGQG YTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAG FAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGIPCQSAQN SLSCTLGALEPFWEFLVRSVETIEEDSMEEDSMEESEESGFWEPPVLPMLTWPVLQARTG LVYDQRMMSHCNLWDNHHPETPQRILRIMCHLEELGLAGRCLNLPARPATDAELLTCHSA EYVERIRATQKMKTRELHREGANFDSIYICPSTFTCAQLATGTVCRLVEAVLEGEVLNGV ALVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRALRVLIVDWDIHHGNGTQHIFED DPSVLYISLHRYDQGTFFPVGDEGACSQMGRAAGTGFTVNVAWNGSRIGDADYLMAWHRL VLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLAGGRIILILEGGY NLTSISESMAACTRSLLGDPPPMLALLRPPQSGALASITETIQVHRKYWRSLWVMKVEDK EGLFSFKSATKKPPRPANRGPAEGMTTPEKNVLEAGTGKATSALSAGESIPGHTESETAV MLPEAHSSQAATRLATLYHTTSEVGMGGAMMDQTTWEAATGVATPDQTTSEESVGGTSLD QTTSEVSMGEAMLDSIISEEGDTLNQNTSEEAVRAAKLIQTPLASSIDNQTPPTSPVPGA ISQISPSQLTRSLRTLKLSDEAQKTSESQIPEEEGLLAEAAGGRDVDDVTLMQGPGNLAD TDQAMFYAVTPMSWCPHLVAVSPKPATGLNVTQPCQDCGTLEENWVCLSCYEVYCSRFVN AHMIQHHEASGHPLVLSYVDLSAWCYLCQAYVHHQALLDVKNTVHQNKFGEDMPHPH NT seq 3774 nt NT seq  +upstreamnt  +downstreamnt atggaaacgaaaagttccggcacccgcggccccacaggtcgtcgagaagttggcggcggc cgcagagggcggagtttgagtagtgggccgcgcctagagagcggctctggaagaattggc cggcatcgacagcaagggcgggaaaaccgcaccagggccgaaatctcccccaccatgtcc tccactggcccggagtccaccacagccaggtcccgaaggagtaggcacaacccccagtcg tcccctcacgactccagcggcaccccgaaacgaagtgttaagaagggcgctttacctcgc tgcagtcccaacctgctagagataaagaagaaaggcaaaatgaagaagctcagccaagca gctgaagaatacctaatcacggggctgcaagagctggatctggactctgaggccaagacg ccggctggcactggtttggtgttcgatgatcagctcaatgaattccactgcctctgggat gacagtttcccagaaggtcctgagcggctccatgccatcaaggagcaactgatacaggag ggcctcctggatcgctgtgtatcctttcacgcgcggtttgcagaaaaggaggagctgatg ttggttcacagcctagaatacattgatctgatggagtcgactcagtacatgaaagaaggg gaactccgtgtcctagcagacacctatgactcagtatatctgcatccgaactcatactcc tgtgcctgcctggcttcaggttctgtcctcaggctggtggatgcagtcctgggggctgag atccggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagtcttatg gatgggtattgcatgttcaatcacgtggctgtggctgctcgttatgctcaacagaagcat ggcatacagagggtccttattgttgactgggatatacaccacggtcaaggaacacagttc atgtttgaccaggaccccagtgttttatatttctccatccaccgctatgagcaaggtcga ttctggccccatcttccagcctctaactggtccaccacaggtttcggccaaggtcaagga tataccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacattgctgcg ttcctgcacatcctgctgccagtcgcctttgagttccaacctcagctggtccttgtggct gctggatttgatgctctccaaggggaccccaagggcgagatggctgccactccagctggg ttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctgtctctg gagggtggctacaacctccgttccctggcggagggcgtcagtgcctcgctccataccctt ctgggagacccttgccccatgctggagtcccctggtatcccctgccaaagtgcccagaat tcactctcctgtactttgggagcccttgagcccttctgggaattccttgtgcgatcagtt gagaccatcgaggaagacagcatggaggaggacagcatggaggagagtgaggagtccgga ttctgggagcccccggtgctgcctatgctgacatggccggtgctgcaggctcgcacaggg ctggtctatgaccagcggatgatgagtcactgcaacttatgggacaaccaccatcccgag acaccccagcgtatcttgcgtatcatgtgccatctggaggagttgggccttgctggacgc tgcctcaacctaccagcacgacctgccactgatgctgagctgctcacttgccacagtgct gagtatgtggagcgtatccgggccacgcagaagatgaagacccgggaactacatcgcgag ggtgccaactttgactcaatctacatctgccccagcaccttcacctgtgcacagcttgcc actggcaccgtctgccgcctggtggaggctgtgctggaaggagaggttttgaatggcgtt gccctggtacgccccccaggacaccatgctgagcaggatgccgcttgtggtttctgcttt ttcaactctgtggcagtggctgctcgccatgcccaggccatcagtggacgtgccctgcgg gtcctgattgtggattgggacatccatcatggtaatgggactcagcacatttttgaggat gaccccagtgtgctctacatatccctgcaccgctatgatcagggcaccttcttccccgtg ggggatgagggtgcctgcagccagatgggccgggctgcgggcacaggtttcactgtcaac gtggcctggaatgggtcccgcataggggatgctgactacctgatggcctggcatcgtctg gtgcttcccattgcatacgagtttaacccagaactggtactggtctcagcgggctttgat gctgcacgaggagacccactggggggctgccaggtgtcacctgagggttatgcccacctc acccacctgttgatgggccttgctggtggccgcattatccttatcctagagggtggctat aacctaacatccatctcggagtctatggctgcctgcacccgctcccttcttggagaccca ccacccatgctggccctgctgcgacccccacaatcaggggccctggcctcaatcactgag accatccaggtccatcgcaaatactggcgcagcctgtgggtcatgaaggtagaagacaag gagggactgttcagttttaagtcagctaccaagaagccacctcgaccagctaatcgtggg ccagctgaggggatgaccacaccagaaaagaatgttctggaagcaggcacggggaaggcc acctcagccctatctgcaggagagtccattccaggccatactgaatcagagacagctgtg atgctccctgaggcccattcctcacaggcagccacaaggttagccaccctgtaccacacc acctcagaggtgggcatgggaggagccatgatggaccagaccacctgggaagcagccaca ggggtagccacaccagaccagaccacctcagaggagtctgtgggcggaacctcactggac cagaccacctcagaggtttccatgggggaagccatgctggacagtatcatttcagaggaa ggagacacgctgaaccagaacacctcagaggaggctgtgagggcagccaagctgatccaa actcctctagcctcaagcatagataaccagacgcccccaacctcacctgtgccaggagcc atatcccagatatcccctagtcagctgactaggagtctcagaaccttgaaactaagcgat gaagctcagaagacctcagaatctcagattccagaagaggagggcctactagcagaggca gctggaggtcgggatgtggatgatgtgacactgatgcagggaccagggaaccttgctgac actgaccaggccatgttttatgctgtgacaccaatgtcctggtgtcctcatttggtggca gtaagccccaaacctgcaacaggcctgaatgtgactcaaccttgtcaagactgtggaaca ctcgaggaaaattgggtgtgtctgtcttgctatgaggtctactgcagccgttttgtcaat gcccatatgatccaacaccatgaagcctctggacacccactggtcctcagctacgttgac ctgtctgcctggtgttacctctgccaggcctatgtccaccaccaggctctcctagatgtg aagaacacggtgcaccagaacaagtttggggaggacatgccccacccacactaa

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