Oryctolagus cuniculus (rabbit): 100355083
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Entry
100355083 CDS
T03373
Name
(RefSeq) whirlin isoform X3
KO
K21879
whirlin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocu03037
]
100355083
Cilium and associated proteins [BR:
ocu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100355083
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
CCM2_C
USH1C_N
HHD_RTEL1
T15H9-4_C
Motif
Other DBs
NCBI-GeneID:
100355083
NCBI-ProteinID:
XP_008271617
Ensembl:
ENSOCUG00000004645
LinkDB
All DBs
Position
1:13144160..13237030
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AA seq
915 aa
AA seq
DB search
MNAQLDGLSVSSSSTGSLGSAAGAAGAGGGGGGGGGGAGLRLLSANVRQLHQALTALLSE
AEREQFTHCLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAE
GLYLPATTPYRQPAWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVE
PGSLAEKEGLRVGDQILRVNDKSLSRVTHAEAVKALKGSKKLVLSVYSAGRIPGGCITNH
IYTWVDPQGRSISPPAGLPQPHGSALRQPDGERRSALHLLQGGDEKKVNLLLGDGRSLGL
TIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVKLLKCSRHL
ILTVKDVGRLPHARTTVDETKWIASSRITEIAANSAGFPGDLTAEGTHKLGFYRGPVGSQ
VTLSSLGNQVRVLLEEQARHLLTEQERATLAYYLHEYRGGSVSVDALTMALFELLNTHAK
FSLLSEVRGVISPQDLERFDHLVLRREIESMKARQPPGPGAGDTYSMVSYSDTGSSTGSH
GTSTTVSSARNTLDLEETGEAVPGNVSALPDVSVDDVKPTCEGLPSCKPPPPPPLLAQGH
DRPPGQLRKPGREDPPAPSSASSHSGIVFSAPRTCSPPAGTAATPGSSSARDSPSSPIYA
SVSPANPGSKRPLDAHLALVSQHPIGPFPRVHSPPHLKSPQAEAPGAGGCLPPPSPSSPP
DPTGTSQHFVMVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAGEAE
ASAPGRGRQTASAKSRSSKELPRNERTTEVASKPPGLLEPTSTLVRMKKSAATLGIAIEG
GANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGVPLRGKEHREAARIIAEAFKTKD
RDCIDFLVTEFNVML
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcagctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcg
gcggccggggctgccggggcgggcggcggcggcggcggcggcggcgggggcgcggggctg
cggctgctgtctgccaacgtgcgccagctgcaccaggcgctgacggcgctgctgagcgag
gcggagcgggagcagttcacgcactgcctgaacgcgtaccacgcgcgccgcaacgtcttc
gacctggtgcgcaccctgcgcgtgctgctggacagcccggtcaagcggcgcctgctgccc
atgctgcgcctggtcatcccgcgctccgaccagctgctgttcgaccagtacacggccgag
ggcctctacctgcccgccaccaccccctaccggcagcccgcctggggcggccccgacggc
gcggggcccggggaggtgcgcctggtgagcctgcggcgcgccaaggcgcacgagggcttg
ggcttcagcatccgcggcggctcggaacacggcgtgggcatctacgtgtcgctggtggag
ccgggctcgctggccgagaaggaagggctgcgggtcggggaccagattctacgcgtcaac
gacaaatccctgtcccgcgtcacccacgcggaggcagtcaaggcgctcaagggctccaag
aagctggtgctgtcggtgtactcagcggggcgcatccccgggggctgcatcaccaaccac
atctacacctgggtggacccccaaggccgcagcatctccccgccggccggcctgccccag
ccccacggcagcgccctgaggcagcccgacggtgagcgcaggagtgccttgcacctcttg
cagggcggggatgagaagaaggtgaacctgctgctgggtgatggccgctccctgggcctc
accatccgagggggagctgagtacggcctgggcatctacatcaccggtgtggacccaggc
tctgaagcggaaggcagtgggctcaaggtcggggaccagattctggaggtgaatgggcgg
agctttctcaacatcctgcacgacgaggccgtgaagctgctcaagtgctcgcggcacctc
atcctgaccgtgaaggacgtggggaggctgccgcacgcccgcaccaccgtggacgagacc
aagtggatcgccagttcccgcatcacggagatcgccgcgaactctgcagggtttcccggg
gacctcacagcagaggggacacacaagctgggattttacaggggcccggtgggctcgcag
gtgaccctgagcagcctgggaaaccaagtgcgtgtgctgctggaggagcaggctcggcac
ctgctgactgagcaggagcgcgccaccctggcctactacctgcatgagtaccgcgggggc
agcgtctctgtggacgccctcaccatggccctgttcgagctcctcaacacccatgccaag
ttctcactgctctcggaggtgagaggcgtcatctccccgcaagacctggagcgctttgac
cacctggtgctgcggcgtgagattgagtccatgaaggcgcggcagcccccgggccctggg
gccggggacacctactccatggtctcctacagtgacacgggctcctccacaggcagccac
ggcacctccaccaccgtcagctcggccaggaacactctggacctcgaggaaactggcgag
gctgtcccgggcaacgtcagcgccctcccagatgtgtccgtggatgacgtaaaacccacc
tgcgaggggctgcccagctgcaagccgccgcctcccccgccactcctggcccaaggccac
gaccgccccccgggccagctgaggaagccggggcgagaggacccccccgcaccctcctcc
gcgtcttcgcactcgggcatcgtcttctcggctccgaggacctgcagcccgccggcgggc
actgctgccaccccgggctcctcctctgcacgggactctccctcctcccccatctacgcc
tccgtctcccccgccaaccctggctccaagaggcccctggacgcccatcttgccctggtc
agccagcaccccatcggccccttccctcgggtccactcaccccctcacctgaaaagcccc
caggccgaggccccaggggctgggggctgcctcccaccaccctcgccctccagcccccca
gaccccacgggcaccagccagcacttcgtcatggtggaggtgcaccgcccagacagtgag
cccgacgtgaatgaagtacgggcgctgccccagacgcgcacagcctccacgctgtcacag
ctctcagacagcgggcagaccctgagcgaggacagtggggtggacgctggtgaggcggag
gccagcgccccaggccggggcagacagacggcgtccgccaagagcaggagtagcaaggag
ctgcctcggaacgagcggaccacagaggtggctagcaaaccacctggactcctggagccc
acatccaccctggttcgcatgaagaagagcgcggccaccctgggcatcgccattgagggc
ggcgccaacacgcgccagcccctgcctaggatcgtcacgattcagagaggtggctcggcc
cacaattgcgggcagctcaaggtgggccacgtgatcctggaagtgaacggggtgccgttg
cgtggcaaggagcaccgggaggccgcccgcatcatcgccgaggcctttaagaccaaggac
cgggactgcatcgatttcctggtcaccgagttcaacgtgatgctctag
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