KEGG   Oryctolagus cuniculus (rabbit): 100355083
Entry
100355083         CDS       T03373                                 
Name
(RefSeq) whirlin isoform X3
  KO
K21879  whirlin
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ocu03037]
    100355083
Cilium and associated proteins [BR:ocu03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   100355083
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 CCM2_C USH1C_N HHD_RTEL1 T15H9-4_C
Other DBs
NCBI-GeneID: 100355083
NCBI-ProteinID: XP_008271617
Ensembl: ENSOCUG00000004645
LinkDB
Position
1:13144160..13237030
AA seq 915 aa
MNAQLDGLSVSSSSTGSLGSAAGAAGAGGGGGGGGGGAGLRLLSANVRQLHQALTALLSE
AEREQFTHCLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAE
GLYLPATTPYRQPAWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVE
PGSLAEKEGLRVGDQILRVNDKSLSRVTHAEAVKALKGSKKLVLSVYSAGRIPGGCITNH
IYTWVDPQGRSISPPAGLPQPHGSALRQPDGERRSALHLLQGGDEKKVNLLLGDGRSLGL
TIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVKLLKCSRHL
ILTVKDVGRLPHARTTVDETKWIASSRITEIAANSAGFPGDLTAEGTHKLGFYRGPVGSQ
VTLSSLGNQVRVLLEEQARHLLTEQERATLAYYLHEYRGGSVSVDALTMALFELLNTHAK
FSLLSEVRGVISPQDLERFDHLVLRREIESMKARQPPGPGAGDTYSMVSYSDTGSSTGSH
GTSTTVSSARNTLDLEETGEAVPGNVSALPDVSVDDVKPTCEGLPSCKPPPPPPLLAQGH
DRPPGQLRKPGREDPPAPSSASSHSGIVFSAPRTCSPPAGTAATPGSSSARDSPSSPIYA
SVSPANPGSKRPLDAHLALVSQHPIGPFPRVHSPPHLKSPQAEAPGAGGCLPPPSPSSPP
DPTGTSQHFVMVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAGEAE
ASAPGRGRQTASAKSRSSKELPRNERTTEVASKPPGLLEPTSTLVRMKKSAATLGIAIEG
GANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGVPLRGKEHREAARIIAEAFKTKD
RDCIDFLVTEFNVML
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgaacgcgcagctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcg
gcggccggggctgccggggcgggcggcggcggcggcggcggcggcgggggcgcggggctg
cggctgctgtctgccaacgtgcgccagctgcaccaggcgctgacggcgctgctgagcgag
gcggagcgggagcagttcacgcactgcctgaacgcgtaccacgcgcgccgcaacgtcttc
gacctggtgcgcaccctgcgcgtgctgctggacagcccggtcaagcggcgcctgctgccc
atgctgcgcctggtcatcccgcgctccgaccagctgctgttcgaccagtacacggccgag
ggcctctacctgcccgccaccaccccctaccggcagcccgcctggggcggccccgacggc
gcggggcccggggaggtgcgcctggtgagcctgcggcgcgccaaggcgcacgagggcttg
ggcttcagcatccgcggcggctcggaacacggcgtgggcatctacgtgtcgctggtggag
ccgggctcgctggccgagaaggaagggctgcgggtcggggaccagattctacgcgtcaac
gacaaatccctgtcccgcgtcacccacgcggaggcagtcaaggcgctcaagggctccaag
aagctggtgctgtcggtgtactcagcggggcgcatccccgggggctgcatcaccaaccac
atctacacctgggtggacccccaaggccgcagcatctccccgccggccggcctgccccag
ccccacggcagcgccctgaggcagcccgacggtgagcgcaggagtgccttgcacctcttg
cagggcggggatgagaagaaggtgaacctgctgctgggtgatggccgctccctgggcctc
accatccgagggggagctgagtacggcctgggcatctacatcaccggtgtggacccaggc
tctgaagcggaaggcagtgggctcaaggtcggggaccagattctggaggtgaatgggcgg
agctttctcaacatcctgcacgacgaggccgtgaagctgctcaagtgctcgcggcacctc
atcctgaccgtgaaggacgtggggaggctgccgcacgcccgcaccaccgtggacgagacc
aagtggatcgccagttcccgcatcacggagatcgccgcgaactctgcagggtttcccggg
gacctcacagcagaggggacacacaagctgggattttacaggggcccggtgggctcgcag
gtgaccctgagcagcctgggaaaccaagtgcgtgtgctgctggaggagcaggctcggcac
ctgctgactgagcaggagcgcgccaccctggcctactacctgcatgagtaccgcgggggc
agcgtctctgtggacgccctcaccatggccctgttcgagctcctcaacacccatgccaag
ttctcactgctctcggaggtgagaggcgtcatctccccgcaagacctggagcgctttgac
cacctggtgctgcggcgtgagattgagtccatgaaggcgcggcagcccccgggccctggg
gccggggacacctactccatggtctcctacagtgacacgggctcctccacaggcagccac
ggcacctccaccaccgtcagctcggccaggaacactctggacctcgaggaaactggcgag
gctgtcccgggcaacgtcagcgccctcccagatgtgtccgtggatgacgtaaaacccacc
tgcgaggggctgcccagctgcaagccgccgcctcccccgccactcctggcccaaggccac
gaccgccccccgggccagctgaggaagccggggcgagaggacccccccgcaccctcctcc
gcgtcttcgcactcgggcatcgtcttctcggctccgaggacctgcagcccgccggcgggc
actgctgccaccccgggctcctcctctgcacgggactctccctcctcccccatctacgcc
tccgtctcccccgccaaccctggctccaagaggcccctggacgcccatcttgccctggtc
agccagcaccccatcggccccttccctcgggtccactcaccccctcacctgaaaagcccc
caggccgaggccccaggggctgggggctgcctcccaccaccctcgccctccagcccccca
gaccccacgggcaccagccagcacttcgtcatggtggaggtgcaccgcccagacagtgag
cccgacgtgaatgaagtacgggcgctgccccagacgcgcacagcctccacgctgtcacag
ctctcagacagcgggcagaccctgagcgaggacagtggggtggacgctggtgaggcggag
gccagcgccccaggccggggcagacagacggcgtccgccaagagcaggagtagcaaggag
ctgcctcggaacgagcggaccacagaggtggctagcaaaccacctggactcctggagccc
acatccaccctggttcgcatgaagaagagcgcggccaccctgggcatcgccattgagggc
ggcgccaacacgcgccagcccctgcctaggatcgtcacgattcagagaggtggctcggcc
cacaattgcgggcagctcaaggtgggccacgtgatcctggaagtgaacggggtgccgttg
cgtggcaaggagcaccgggaggccgcccgcatcatcgccgaggcctttaagaccaaggac
cgggactgcatcgatttcctggtcaccgagttcaacgtgatgctctag

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