Oryctolagus cuniculus (rabbit): 100355144
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Entry
100355144 CDS
T03373
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100355144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocu03009
]
100355144
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100355144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
TIP49
AAA_2
AAA_33
RNA_helicase
AAA_28
nSTAND3
Mg_chelatase
ABC_tran
AAA_18
AAA_17
NPHP3_N
NACHT
ATPase
nSTAND_NTPase5
TsaE
AAA_3
Zeta_toxin
Rad17
IstB_IS21
Parvo_NS1
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
100355144
NCBI-ProteinID:
XP_008266582
Ensembl:
ENSOCUG00000005530
UniProt:
G1SP50
LinkDB
All DBs
Position
16:complement(36362338..36472124)
Genome browser
AA seq
851 aa
AA seq
DB search
MKPRPAGFVDNKLKHRVIQYLTSNRCGKYVDTEVLASDLQRMYSIDYGRRKKNAFRIQVE
KAFNIIGNEKEFKNLTELEDEHRAKRARRDEEDKEYTESYSDDDSDMEDYTDLQSANHMN
SSLLSLYRKGNPDSVSNVLETEQRETTASAPRITSKTGSIPLKTPARESEGGLFIEKTHG
GKKDHFFLDLSNKKSNHKKPLSEIQDSKDSSLLERDKKRKGRLKSKGSKKKKKYLQEVDR
KIEAVLQKKAKSRKLELQNSTVKFEDVGGNDATLKEVCKMLIHMRHPEVYHHLGVVPPRG
VLLHGPPGCGKTLLAHAIAGELNLPILKVAAPEVVSGVSGESEQKLRELFTQAVSNAPCI
VFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNMPATAQVLVIGATNRPDSLDPAL
RRAGRFDREICLGIPDEASRERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCRE
AAMCAVNRGLMKLQQQQQKHLKTEVGQEEPLGTEPTSVTQDELQRLLELLRDHTPLSDEQ
MQGLCIELNDFTVALSSVQPSAKREGFVTVPSVTWADVGALEDIREELTMAILAPVRNPD
QFKALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQ
VFQRAKNSSPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLESRQQVFIMAATN
RPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLETVASDLRC
DGYTGADLSALVREASLCALRQEMARQKSGDGKGELKIGQKHFEEAFKKVKSSISIKDQM
MYDALQRSLTR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctagacctgcgggtttcgtggataataagctcaagcaccgcgttatccagtac
ctcaccagtaacagatgtggcaaatatgtggacactgaagtcttagcatctgatctgcaa
agaatgtacagtatagactacgggcgaagaaaaaaaaatgcttttaggattcaggtggaa
aaagcctttaacataattggcaatgagaaggaatttaagaatctgacagaattagaagat
gaacatagagcaaaaagagcaagacgggatgaagaggataaggagtatactgaaagctat
tcagatgatgattcagatatggaagattacacagatttacagtcagcaaatcacatgaac
agttccctgctctctttgtatcggaaaggaaatcctgattctgtttcaaatgttctcgag
acggagcaaagagaaaccactgcttcagcaccacggataacttccaaaacaggctccatt
cctttgaagacccctgccagagagtctgagggaggattgtttattgaaaaaacccacggt
ggaaagaaagaccattttttcttggacctttcaaataagaaaagtaatcataagaagcca
ttatctgagatacaggattcaaaagactcttctcttctggagagagataaaaaaaggaaa
ggcaggctaaagagcaaaggaagcaaaaagaagaaaaaatatcttcaggaagtagacaga
aaaatagaagctgtcctccaaaagaaagccaaatctaggaagctggaattgcagaactct
actgtgaagtttgaagatgttggaggcaatgatgcaacattaaaagaagtctgcaagatg
ctcatacacatgcggcacccggaggtgtaccaccacctgggcgtcgtgcccccgcgtgga
gtgctccttcatgggccgcctggctgtgggaagacactgctggcacatgcaattgcaggg
gaacttaacttgcctattctgaaagtggcggccccagaggttgtgtctggcgtgtctgga
gagtccgagcagaagctaagggagctgttcacacaagccgtgtcaaatgcaccttgtatt
gttttcattgatgaaattgatgctattacgcccaaaagagaagttgcttcaaaagatatg
gaacgaagaattgtagcccagcttctaacctgcatggatgatctgaataacatgcctgca
acagctcaggtcctagtaatcggagctactaatcggccagactcgttagaccctgctttg
agacgggcaggaagatttgaccgagaaatatgcctgggaatcccagatgaagcatccaga
gaaaggatacttcagactttgtgtagaaaactgagacttcctgaaacctttaacttttgt
cacttagcacacctaacgcctggctttgtgggtgctgatctgatggcgctctgccgggaa
gctgccatgtgtgccgtcaataggggcctaatgaagcttcagcaacagcagcagaaacat
ctgaaaactgaagttggccaggaggagccactgggaactgagcccacttctgtcacacag
gatgaattacagaggctgttggaattgctaagagaccacactcccctctcagacgagcag
atgcaaggactgtgcattgaattgaatgatttcactgttgctctgtcatcagtccagcca
tctgccaaaagagaaggctttgtcactgtccctagtgtgacgtgggcagatgttggtgcc
ctggaagacataagagaagagctcaccatggcaatattggcaccagttcggaacccagac
cagttcaaagctcttgggttaatgaccccagctggagtcctccttgctggtcctcctggc
tgtgggaaaactctgctggcgaaggctgtggcaaatgagtctggactaaactttatatct
gtcaagggccctgaattactaaatatgtatgttggcgagagtgaacgtgctgtgcggcag
gtttttcagcgagccaagaactcgtctccctgtgtgatattctttgatgaagtggatgct
ttgtgtccccggagatccgaccgagagacaggagctagtgtgcgggtggtgaatcagctg
cttacagagatggatggtctggagtcgcgccagcaggtttttatcatggcagccactaac
cggccagatatcattgaccctgccattctacgtccaggccggctggacaaaacactcttt
gtgggtttaccacccccagcagatcgccttgccatcttaaaaactatcacaaaaaatggt
accaaacctccactggatgcagatgtgaatttggaaacagttgctagtgacctgcgttgt
gatggctatacgggtgcagacctgtctgcattggtacgggaagcttctctctgtgccctg
agacaggaaatggcaagacagaagagtggagatgggaaaggtgaactcaagattggtcag
aagcactttgaagaagctttcaaaaaagtgaagtcatctatatcaataaaggatcaaatg
atgtatgacgctctgcagcgctccctcacccggtga
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