KEGG   Oryctolagus cuniculus (rabbit): 100355156
Entry
100355156         CDS       T03373                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03082  ATP-dependent chromatin remodeling
ocu03083  Polycomb repressive complex
ocu04110  Cell cycle
ocu04213  Longevity regulating pathway - multiple species
ocu04330  Notch signaling pathway
ocu04350  TGF-beta signaling pathway
ocu04613  Neutrophil extracellular trap formation
ocu04919  Thyroid hormone signaling pathway
ocu05016  Huntington disease
ocu05031  Amphetamine addiction
ocu05034  Alcoholism
ocu05165  Human papillomavirus infection
ocu05169  Epstein-Barr virus infection
ocu05200  Pathways in cancer
ocu05202  Transcriptional misregulation in cancer
ocu05203  Viral carcinogenesis
ocu05206  MicroRNAs in cancer
ocu05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100355156
   03083 Polycomb repressive complex
    100355156
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100355156
   04350 TGF-beta signaling pathway
    100355156
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100355156
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100355156
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    100355156
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    100355156
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100355156
   05202 Transcriptional misregulation in cancer
    100355156
   05206 MicroRNAs in cancer
    100355156
   05203 Viral carcinogenesis
    100355156
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    100355156
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100355156
   05165 Human papillomavirus infection
    100355156
  09164 Neurodegenerative disease
   05016 Huntington disease
    100355156
  09165 Substance dependence
   05031 Amphetamine addiction
    100355156
   05034 Alcoholism
    100355156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocu03036]
    100355156
Enzymes [BR:ocu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100355156
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100355156
   HDAC complexes
    Sin3A-HDAC complex
     100355156
    BRAF-HDAC complex
     100355156
    REST complex
     100355156
    SHIP complex
     100355156
    MiDAC complex
     100355156
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100355156
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100355156
  Chromatin remodeling factors
   NuRD complex
    100355156
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100355156
NCBI-ProteinID: XP_002720761
Ensembl: ENSOCUG00000003674
UniProt: G1SK67
LinkDB
Position
Unknown
AA seq 482 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKDKDAEEKKEVAEEEKTKEEKPEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaggaggaaagtctgttactactacgacggtgatgttggg
aattactactatggacaaggccatccaatgaagcctcaccggatccgcatgactcacaac
ttgctgctcaactatggtctctaccggaaaatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgacgactacattaagttcttgcgctccattcgt
ccggataacatgtccgagtacagcaagcagatgcagcgattcaacgttggtgaggactgt
ccagtatttgatggcctgtttgaattttgtcagttgtctactggtggctctgtagcaagt
gctgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctgcac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgggtcatgaccgtgtcctttcataag
tatggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaaa
tattatgctgttaactacccgctccgagatgggattgacgacgagtcctatgaagccatt
ttcaagccggtcatgtccaaagtgatggagatgttccagcctagcgccgtggtcttacag
tgtggctcagactccctgtctggggatcggctgggttgcttcaatctgaccatcaaaggg
cacgccaagtgtgtggaatttgtcaagagcttcaacctgcccatgctgatgctgggagga
ggcggttacaccatccgcaatgtcgcccggtgctggacatacgaaaccgccgtggccctg
gacacagagatccctaatgagcttccatacaatgactacttcgaatactttgggccagat
ttcaagcttcacatcagtccttccaatatgacgaaccagaacactaatgagtatctggaa
aagatcaaacagcggctgttcgagaacctgaggatgctgccgcacgcgcctggggtccaa
atgcaggcgattcctgaggatgccatcccggaggagagtggcgatgaggatgaagaagac
cctgacaagcgcatctcgatctgttcctctgacaaacgaattgcctgtgaggaggagttt
tccgactccgatgaggagggagagggcgggcgcaagaattcttccaacttcaagaaagcc
aagagagtcaaaacagaagatgaaaaagacaaagatgctgaagagaagaaagaagtcgca
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaagaggaggtcaag
ctggcctga

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