KEGG   Oryctolagus cuniculus (rabbit): 100355227
Entry
100355227         CDS       T03373                                 
Name
(RefSeq) integrin alpha-E isoform X1
  KO
K06524  integrin alpha E
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04518  Integrin signaling
ocu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    100355227
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100355227
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocu04515]
    100355227
   04090 CD molecules [BR:ocu04090]
    100355227
Cell adhesion molecules [BR:ocu04515]
 Integrins
  Integrin alpha subunits
   100355227
CD molecules [BR:ocu04090]
 Proteins
  100355227
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 VWA_2 FG-GAP_3 Integrin_alpha Integrin_A_Ig_1 vWA_SIBA-E
Other DBs
NCBI-GeneID: 100355227
NCBI-ProteinID: XP_008269099
Ensembl: ENSOCUG00000008018
UniProt: G1SUB4
LinkDB
Position
19:12296094..12357700
AA seq 1165 aa
MWLFLSLLCTAVPTPLAAFNVDEAGAWVTPAGAPFVLSALLHQDPSTNQTWLLVTSPRTS
RPSWPLHQCSLVQNEIQCRPVEHVPMSKGKHLGVTVVRNHHGVLICTQMQSRQPHSLSSE
LTGNCTLLDSDLRPRTQVSFIDLENHLDPHVRVDAGDCYQNKEGGMGEEESTARWRRALE
KAEEEEEEEEEAGTEIAIVLDGSGSIDPPDFQRAKDFIANMMTNFSEKCFECSFALVQYG
RVIQTEFNLQDSQNMTASLAKVQNITQVRNVTRTASAIQHVLDDIFTQRHGSRKKASKVI
VVLTDGDTFEDPLNLTVVINSPKMQGIERFAIGVGDAFKKHQTEQELKLIASDPDETHAF
KVTNYSALDGLLSRLQQSIIRTEGAVGEALHFQLAQIGFSAQILDEEQVLLGAVGAFDWS
GGALLYHMHSRQGRFLNHTAADAEAAQYGYLGYSVAVLHKACGLTYVAGAPRYKQRGAVF
ELQKQDARTAFAQVLEGEQMGSYFGSELCPVDIDMDGTTDLLLVAAPFYHIHKEEGRVYV
YRLHEQAGSFSLEHTLSGPPGLTDARFGFAMAAVGDISQDGFTDVAIGAPLEGVGADDGA
SFGSVYIYNGRRDGLFTSPSQRIKASAVATGLHYFGISVAGGSDFSGDGLADITVGTLGR
AVVLRSRPVVRLNVSMNFKPSQLPIGFNGSTMATLCFNSSSKSDLGGTALNFTLDVDVLK
PRRRLQCLNTRTCLGQLKEWANGSSVRENFQLTSTEAQLCEEDCFSNITVKVSYRLQTQE
GQWDRPQPILDKYTEPTAIFQLPYEKACKNPLFCVAELHVATAVSPQELVVGLTKELTMN
ISLTNSGEDSFMTSLALSYPRNLHFKRMQKPPSPDIQCDDPKPVASVLIMKCKIGHPIFK
RSSQANVLVVWQLEESAFPNRTANITVTFTNSNEKSSSAIETHSLQFKHAFVAALSKPSV
MYVNMGRGLSDHKEFLFNIHGENLFGAEFQLQICVPVKLQGLQIVKVKALTKTQNLTVCS
QGPQSDCVSDRLQRVEKWCSVSCAVRSARENVTVAAELALGPAAQLLRDVRELQVFGKIV
FNESFYVGLNPENHRTQITVVFLQDEWNYSLLLILGSSVGGLLVLVLIIAILFKCGFFKR
KYQQLNLESIRRAQLRAESLLLEDS
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgtggctgttcctctctctgctctgcacggccgtaccgacgcccctagcggccttcaac
gtggacgaggccggggcctgggtcacacctgcgggagcacctttcgtgctgagtgcactt
ctgcaccaggaccccagcaccaaccagacctggctcctggtcaccagcccgagaaccagc
aggccatcatggcccctacaccagtgttctctcgtccagaatgaaatccagtgccggccc
gtggagcatgtccccatgtccaaggggaagcacctgggagtgacagtggtccggaaccac
catggtgttttgatatgcacccaaatgcagtctaggcagccccacagcctcagctcagag
ctcacaggcaactgcaccttgctggactctgacctgcgtccccgaacccaggtctccttc
attgatcttgagaatcacctggatccacatgtacgtgtggatgctggagactgctatcaa
aacaaagaaggcggcatgggggaggaagagagcacagccaggtggcgccgggctctggag
aaggcagaggaggaggaggaagaggaagaagaggcaggcaccgagattgctatcgtccta
gatggttcaggaagcattgaccccccagacttccagagagccaaagacttcatcgccaac
atgatgacgaacttcagtgagaagtgttttgagtgcagcttcgccctggtgcaatatggg
cgggtcatccagacagagttcaaccttcaggacagccagaatatgacagcctccctcgcc
aaggtccagaacatcactcaagtgaggaacgtcaccaggactgcctcggccattcagcac
gtgctagacgacatcttcacgcagaggcacggctccagaaaaaaggcctcgaaggtcatc
gtggtgctcaccgacggggacacattcgaggaccccctcaacctcacggttgtcatcaac
tcacccaagatgcagggcattgaacgttttgccatcggggtgggagatgcatttaagaaa
catcagactgaacaggagctgaagctgatcgcctcggaccctgatgagacccacgccttc
aaggtgaccaactactcggcgctggacgggctgctgagcaggctgcagcaaagcatcatc
cgcacggaaggcgcagtcggagaggccctccacttccagctggcacagattggcttcagt
gcccagatcctggacgaggagcaggtgctgcttggcgctgtcggggcctttgactggtcc
ggaggcgccctgctctaccacatgcacagccgccagggccgcttcctcaaccacactgcg
gctgatgctgaggctgcgcagtacggctacctgggttactcagtggccgtgctgcacaag
gcctgtggcctcacctacgtggcaggggctccacggtacaagcagcgaggggcagtgttt
gagctccagaagcaggatgcacggaccgctttcgcgcaggtgctagaaggagagcagatg
gggtcctattttggctctgagctgtgccccgtggacatcgacatggatgggaccaccgac
ttgttgctggtggctgctccgttttaccatatccataaagaggaaggcagagtttacgtg
taccggctgcatgagcaggctggttccttctccttggaacacacactgagcgggcccccg
gggctcactgatgcccgcttcggcttcgccatggcggctgtgggggacatcagtcaggac
gggttcacggatgtggccatcggggcccccctggagggtgtcggggcagacgatggcgcc
agcttcggcagcgtgtacatctacaacggacgccgggacggtctcttcaccagcccctca
cagcggatcaaggcctcagccgtggccacaggactccattacttcggcatatctgtggcc
ggtggctcagatttcagtggcgatggccttgctgacatcactgtgggcacgctgggccga
gcagttgtgctccgctcccggcccgtggttcgtctgaatgtgtccatgaacttcaaaccc
agccaactgccaattggtttcaacggcagcacgatggcgactttgtgttttaatagcagc
tccaagtcagacctcggagggacagccctcaacttcacgctggacgtggacgtgctgaaa
cccaggagaaggctgcagtgcctaaacacgagaacctgtctcggccagctgaaggagtgg
gccaatggctcttctgtgcgtgagaactttcagctcacctccacggaggcacagctctgt
gaggaagactgcttttccaacatcactgtcaaggtcagctaccgactgcagacccaggag
ggacagtgggaccgcccccagcccatcctggacaagtacacggagcccaccgccatcttc
cagttgccctacgagaaggcctgcaagaacccgctgttctgtgtcgcggagctacacgtg
gccaccgccgtttctccgcaggaactggtggtaggtctcacgaaggagctgaccatgaac
atcagcctgactaactctggggaggattccttcatgaccagtctggctctgagttatccc
cgaaacttacacttcaagaggatgcaaaagcctccctctccagacattcagtgtgatgac
cctaagccagttgcttctgtcctgatcatgaagtgcaagatcggtcaccccatattcaag
aggtcatctcaggcaaatgttttggtagtttggcagctagaggaaagtgcttttccaaac
aggacagcaaacatcaccgtgaccttcaccaattccaatgaaaaatcttcttcggctata
gagacccacagccttcaattcaagcacgcctttgttgcagctctttccaaaccgtcagtg
atgtacgtgaacatgggcagggggctttctgaccacaaagaattcctcttcaacatacat
ggggagaatctctttggagccgaatttcagctgcagatttgtgtcccagtcaaattacaa
ggtctccagattgtaaaagtgaaggccctgacaaagactcagaacctcacggtgtgctcc
cagggtccgcagagtgattgtgtgagcgatcggcttcagcgtgtggaaaagtggtgttcc
gtgagctgcgctgtcaggtcggccagagagaacgtgaccgtggctgccgagctcgccctg
ggtccggctgcgcagttactaagagatgtccgtgaactgcaggtcttcgggaaaattgtt
ttcaacgaatctttctatgtggggctgaacccagagaaccacagaacccagatcaccgtc
gtcttcctgcaagatgagtggaactactccctgctgctcatccttggcagcagtgttggt
ggcctgctggttttggtcctgattatcgccatcctgttcaagtgtggcttttttaaaagg
aaataccagcaactgaacttggagagcataagaagggcccagctgagagccgagagcctg
ctcctggaagacagttag

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