Oryctolagus cuniculus (rabbit): 100355227
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Entry
100355227 CDS
T03373
Name
(RefSeq) integrin alpha-E isoform X1
KO
K06524
integrin alpha E
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04518
Integrin signaling
ocu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
100355227
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100355227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100355227
04090 CD molecules [BR:
ocu04090
]
100355227
Cell adhesion molecules [BR:
ocu04515
]
Integrins
Integrin alpha subunits
100355227
CD molecules [BR:
ocu04090
]
Proteins
100355227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Integrin_alpha
Integrin_A_Ig_1
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
100355227
NCBI-ProteinID:
XP_008269099
Ensembl:
ENSOCUG00000008018
UniProt:
G1SUB4
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Position
19:12296094..12357700
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AA seq
1165 aa
AA seq
DB search
MWLFLSLLCTAVPTPLAAFNVDEAGAWVTPAGAPFVLSALLHQDPSTNQTWLLVTSPRTS
RPSWPLHQCSLVQNEIQCRPVEHVPMSKGKHLGVTVVRNHHGVLICTQMQSRQPHSLSSE
LTGNCTLLDSDLRPRTQVSFIDLENHLDPHVRVDAGDCYQNKEGGMGEEESTARWRRALE
KAEEEEEEEEEAGTEIAIVLDGSGSIDPPDFQRAKDFIANMMTNFSEKCFECSFALVQYG
RVIQTEFNLQDSQNMTASLAKVQNITQVRNVTRTASAIQHVLDDIFTQRHGSRKKASKVI
VVLTDGDTFEDPLNLTVVINSPKMQGIERFAIGVGDAFKKHQTEQELKLIASDPDETHAF
KVTNYSALDGLLSRLQQSIIRTEGAVGEALHFQLAQIGFSAQILDEEQVLLGAVGAFDWS
GGALLYHMHSRQGRFLNHTAADAEAAQYGYLGYSVAVLHKACGLTYVAGAPRYKQRGAVF
ELQKQDARTAFAQVLEGEQMGSYFGSELCPVDIDMDGTTDLLLVAAPFYHIHKEEGRVYV
YRLHEQAGSFSLEHTLSGPPGLTDARFGFAMAAVGDISQDGFTDVAIGAPLEGVGADDGA
SFGSVYIYNGRRDGLFTSPSQRIKASAVATGLHYFGISVAGGSDFSGDGLADITVGTLGR
AVVLRSRPVVRLNVSMNFKPSQLPIGFNGSTMATLCFNSSSKSDLGGTALNFTLDVDVLK
PRRRLQCLNTRTCLGQLKEWANGSSVRENFQLTSTEAQLCEEDCFSNITVKVSYRLQTQE
GQWDRPQPILDKYTEPTAIFQLPYEKACKNPLFCVAELHVATAVSPQELVVGLTKELTMN
ISLTNSGEDSFMTSLALSYPRNLHFKRMQKPPSPDIQCDDPKPVASVLIMKCKIGHPIFK
RSSQANVLVVWQLEESAFPNRTANITVTFTNSNEKSSSAIETHSLQFKHAFVAALSKPSV
MYVNMGRGLSDHKEFLFNIHGENLFGAEFQLQICVPVKLQGLQIVKVKALTKTQNLTVCS
QGPQSDCVSDRLQRVEKWCSVSCAVRSARENVTVAAELALGPAAQLLRDVRELQVFGKIV
FNESFYVGLNPENHRTQITVVFLQDEWNYSLLLILGSSVGGLLVLVLIIAILFKCGFFKR
KYQQLNLESIRRAQLRAESLLLEDS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgttcctctctctgctctgcacggccgtaccgacgcccctagcggccttcaac
gtggacgaggccggggcctgggtcacacctgcgggagcacctttcgtgctgagtgcactt
ctgcaccaggaccccagcaccaaccagacctggctcctggtcaccagcccgagaaccagc
aggccatcatggcccctacaccagtgttctctcgtccagaatgaaatccagtgccggccc
gtggagcatgtccccatgtccaaggggaagcacctgggagtgacagtggtccggaaccac
catggtgttttgatatgcacccaaatgcagtctaggcagccccacagcctcagctcagag
ctcacaggcaactgcaccttgctggactctgacctgcgtccccgaacccaggtctccttc
attgatcttgagaatcacctggatccacatgtacgtgtggatgctggagactgctatcaa
aacaaagaaggcggcatgggggaggaagagagcacagccaggtggcgccgggctctggag
aaggcagaggaggaggaggaagaggaagaagaggcaggcaccgagattgctatcgtccta
gatggttcaggaagcattgaccccccagacttccagagagccaaagacttcatcgccaac
atgatgacgaacttcagtgagaagtgttttgagtgcagcttcgccctggtgcaatatggg
cgggtcatccagacagagttcaaccttcaggacagccagaatatgacagcctccctcgcc
aaggtccagaacatcactcaagtgaggaacgtcaccaggactgcctcggccattcagcac
gtgctagacgacatcttcacgcagaggcacggctccagaaaaaaggcctcgaaggtcatc
gtggtgctcaccgacggggacacattcgaggaccccctcaacctcacggttgtcatcaac
tcacccaagatgcagggcattgaacgttttgccatcggggtgggagatgcatttaagaaa
catcagactgaacaggagctgaagctgatcgcctcggaccctgatgagacccacgccttc
aaggtgaccaactactcggcgctggacgggctgctgagcaggctgcagcaaagcatcatc
cgcacggaaggcgcagtcggagaggccctccacttccagctggcacagattggcttcagt
gcccagatcctggacgaggagcaggtgctgcttggcgctgtcggggcctttgactggtcc
ggaggcgccctgctctaccacatgcacagccgccagggccgcttcctcaaccacactgcg
gctgatgctgaggctgcgcagtacggctacctgggttactcagtggccgtgctgcacaag
gcctgtggcctcacctacgtggcaggggctccacggtacaagcagcgaggggcagtgttt
gagctccagaagcaggatgcacggaccgctttcgcgcaggtgctagaaggagagcagatg
gggtcctattttggctctgagctgtgccccgtggacatcgacatggatgggaccaccgac
ttgttgctggtggctgctccgttttaccatatccataaagaggaaggcagagtttacgtg
taccggctgcatgagcaggctggttccttctccttggaacacacactgagcgggcccccg
gggctcactgatgcccgcttcggcttcgccatggcggctgtgggggacatcagtcaggac
gggttcacggatgtggccatcggggcccccctggagggtgtcggggcagacgatggcgcc
agcttcggcagcgtgtacatctacaacggacgccgggacggtctcttcaccagcccctca
cagcggatcaaggcctcagccgtggccacaggactccattacttcggcatatctgtggcc
ggtggctcagatttcagtggcgatggccttgctgacatcactgtgggcacgctgggccga
gcagttgtgctccgctcccggcccgtggttcgtctgaatgtgtccatgaacttcaaaccc
agccaactgccaattggtttcaacggcagcacgatggcgactttgtgttttaatagcagc
tccaagtcagacctcggagggacagccctcaacttcacgctggacgtggacgtgctgaaa
cccaggagaaggctgcagtgcctaaacacgagaacctgtctcggccagctgaaggagtgg
gccaatggctcttctgtgcgtgagaactttcagctcacctccacggaggcacagctctgt
gaggaagactgcttttccaacatcactgtcaaggtcagctaccgactgcagacccaggag
ggacagtgggaccgcccccagcccatcctggacaagtacacggagcccaccgccatcttc
cagttgccctacgagaaggcctgcaagaacccgctgttctgtgtcgcggagctacacgtg
gccaccgccgtttctccgcaggaactggtggtaggtctcacgaaggagctgaccatgaac
atcagcctgactaactctggggaggattccttcatgaccagtctggctctgagttatccc
cgaaacttacacttcaagaggatgcaaaagcctccctctccagacattcagtgtgatgac
cctaagccagttgcttctgtcctgatcatgaagtgcaagatcggtcaccccatattcaag
aggtcatctcaggcaaatgttttggtagtttggcagctagaggaaagtgcttttccaaac
aggacagcaaacatcaccgtgaccttcaccaattccaatgaaaaatcttcttcggctata
gagacccacagccttcaattcaagcacgcctttgttgcagctctttccaaaccgtcagtg
atgtacgtgaacatgggcagggggctttctgaccacaaagaattcctcttcaacatacat
ggggagaatctctttggagccgaatttcagctgcagatttgtgtcccagtcaaattacaa
ggtctccagattgtaaaagtgaaggccctgacaaagactcagaacctcacggtgtgctcc
cagggtccgcagagtgattgtgtgagcgatcggcttcagcgtgtggaaaagtggtgttcc
gtgagctgcgctgtcaggtcggccagagagaacgtgaccgtggctgccgagctcgccctg
ggtccggctgcgcagttactaagagatgtccgtgaactgcaggtcttcgggaaaattgtt
ttcaacgaatctttctatgtggggctgaacccagagaaccacagaacccagatcaccgtc
gtcttcctgcaagatgagtggaactactccctgctgctcatccttggcagcagtgttggt
ggcctgctggttttggtcctgattatcgccatcctgttcaagtgtggcttttttaaaagg
aaataccagcaactgaacttggagagcataagaagggcccagctgagagccgagagcctg
ctcctggaagacagttag
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integrated database retrieval system