Oryctolagus cuniculus (rabbit): 100355386 Help Entry 100355386         CDS       T03373                                  Name (RefSeq) collagen alpha-1(XXIV) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04820   Cytoskeleton in muscle cells ocu04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100355386  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     100355386  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ocu00536]     100355386 Glycosaminoglycan binding proteins [BR:ocu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100355386 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 GH131_N Motif Other DBs NCBI-GeneID:  100355386 NCBI-ProteinID:  XP_051712256 Ensembl:  ENSOCUG00000003917 LinkDB All DBs Position 13:78864303..79279624 Genome browser AA seq 1714 aa AA seqDB search MHLGAHRTRRGKVFSPTAKTNLPLHFILLCVAGIVVHAQEQGIDILHQLGLGGKDVRHSS SVTALPSSSTPLPQGFHVTESGVILKNDTYIESPLMNILPANLGQSFTMLIGLQSHRMNN AFLFSIRNKNKLQLGVQLLPKKLVVHIGGKQSVVFNSSVHDGQWHSFAITVTNQVVSMFV ECGKKYFSRETTSEVPTFDSNSVFTLGSINNNSVHFEGIVCQLDIIPAAEASADYCRYGK QQCHQADKFRPETSLLRTTIIAAKIPESSPLPKQRDEIGLSEDIFTEGKSILNIINDSAT VQKVQEHQMSRSQLTSLHSGNISAVDLTNYGIQVKEMTTEKHTQTNISQSVTHHRFSDTR MNASEKLISPLNVSDNITAYDDKVTALPLFKKMSSILPRLKQDAITDHNKAITANLHTNE LMEMQQILNTTFYRVTDEPSVNNHLDLRKEGEFYPDTTYPIENSYETELYDYYYDEDLNT LLRMEYLRGPKGNTGPPGPPGPTGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGSKGDPG FSPGQAVSGEKGDQGLSGLMGPPGMQGEKGAKGYPGLPGLQGEQGIPGLAGNIGSPGYPG RQGLAGPEGNPGPKGVRGYIGSPGEAGPLGPEGERGSPGIRGKKGLKGRQGFPGDFGERG PAGLDGSPGLVGGIGPPGFPGLRGSFGPVGPVGPSGIPGPMGLSGNKGLPGIKGDKGEQG MAGEQGEPGYPGDKGTVGLPGLPGMRGKPGLSGQPGDPGPQGPPGPPGPEGFPGDIGIPG QNGPEGPKGLLGNRGPPGPSGLKGTQGEEGPMGPFGELGPRGKPGQKGSIGEPGPEGLKG EVGDQGDIGKIGETGPVGLPGEVGTTGSIGEKGDRGSPGPLGPQGEKGAMGYPGPPGVPG PMGTLGLPGLVGARGSPGSQGPKGQRGPRGPDGLPGEPGLQGAKGERGDQGKRGPPGLTG KTGSPGERGIQGKSGLQGPPGNTGDKGVAGEPGPRGLQGDAGPPGEMGVEGPPGIEGEPG LQGDPGAKGDVGPAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGTQGGRGFPGEDGEKG DMGLQGTPGPLGKPGHMGLPGPEGIVGIPGQRGRPGKKGDKGKAGPTGEVGSRGAPGQTG ENGPKGARGTRGAVGPIGLMGPDGETGIPGYSGHQGQPGLSGFPGPKGEKGYPGEDSAVL GPPGPRGEPGPMGEQGERGEPGAEGYKGHVGVPGLRGATGQQGLPGEPGDQGEQGPKGER GSEGPKGKKGAPGPPGKRGVPGLPGPPGPKGIQGYHGQDGISGNPGKVGPPGKQGLPGIR GSQGKPGLSGSPGPRGVKGSSGPPGSAGRLGPKGEQGLPGQPGIQGKRGHRGAQGDQGPC GDPGLKGQPGEHGDQGLTGFQGFPGPKGPEGDAGSAGISGPKGPTGLRGNTGPLGREGII GPTGRTGPRGEKGFRGEAGPQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIESNAALQM ESYQNTEVTLIDHSAEIFKTLNYLSNLLHSIKNPLGTRDNPARICKDLLNCEHKVSDGKY WIDPNLGCPSDAIEVFCNFSAGGQTCLSPVSVTKLEFGVGKVQMNFLHLLSSEATHVITI HCLNTARWTSTQTSGPGLPIGFKGWNGQIFEENTLLEPKVLSDDCKIQDGSWHKAKFLFH TQDPNQLPVVEVQKLPHLKTEQKYYIESSSVCFL NT seq 5145 nt NT seq  +upstreamnt  +downstreamnt atgcatttaggcgcccacaggacaaggcgtggaaaggtcttctcccccacggcaaaaacg aacctgcctcttcattttattctgctatgtgtggctggaattgttgttcatgcacaagaa caaggcatagatattcttcatcaactaggccttggaggcaaagatgtaagacactcatca tcagtgactgctctaccatcatcatctacaccattacctcaggggttccatgtaacagaa tcaggtgtcattttaaaaaatgacacttatattgagtcacctctcatgaacattttacct gccaatttaggacagtcatttacaatgttaattgggttacagtcacatagaatgaacaat gcatttctcttcagcattagaaataagaataagctgcaattaggagtccagttactacct aaaaagttagttgtacatattggaggaaaacaatctgtagttttcaactccagtgttcat gatgggcaatggcactcatttgccattactgttacaaaccaagttgtctccatgtttgtt gagtgtggaaagaaatattttagcagagagactacttctgaagtcccgacttttgattct aacagtgtgtttaccttgggaagtataaataataattcagtccattttgaaggaatagta tgtcagttggatattattcctgctgctgaagcatctgcagactactgcaggtatgggaaa cagcagtgtcaccaagcagacaaatttcgacctgaaacaagccttcttcgcacaaccatc atagcagccaagataccagagagctctcccctgcccaaacaacgtgatgaaataggactg tcagaggatatatttacggaaggcaaaagcattctaaatatcatcaatgactctgctaca gtgcaaaaagtacaagaacaccagatgtcaagatctcagttaacatctcttcattcagga aatatctctgctgtggatctcaccaactatgggattcaggtcaaagaaatgaccactgag aaacatacacagacaaatataagccagtcagtgactcatcatcgattcagtgatacaaga atgaatgccagtgagaaactgatttctcccttaaatgtttctgacaatatcacagcgtat gatgataaagtaactgctttgccactgtttaagaaaatgtcatctattcttccacgttta aaacaggatgcaatcactgatcataacaaggctatcacagcaaatctacacactaatgaa ctaatggaaatgcaacagattttaaatacaaccttctatagagtgacagatgaaccatct gtgaataaccaccttgatctaaggaaggaaggtgaattttatcctgacactacttacccc attgaaaatagctatgaaactgagctttatgactattattatgatgaggatcttaataca ctgcttcgcatggagtatctgagagggccaaaagggaacactggacctcctggtcctcct ggtcccacaggtattcctggtccatcaggaaagagaggtccacggggtataccagggcca catggaaatcctgggctacctggattaccaggtccaaagggctccaaaggagatccaggt ttttccccaggtcaagctgtttctggagaaaagggtgatcaagggctttctggactaatg ggcccccctggtatgcaaggtgagaagggcgccaaaggatacccagggctcccaggcctc caaggtgaacaaggaatcccaggactcgctggtaatattggttcacctggttaccctggc aggcagggtttagctggaccagaaggtaatccaggtccaaaaggtgtacgaggttatatt ggatctcctggagaagcaggaccactgggacctgaaggagaaaggggtagtcccggaatc cgtggaaagaaaggtcttaagggaaggcagggttttccaggtgactttggagagagaggc cctgctggtcttgatggcagtcctggactggtaggtggcattggtcctccagggtttcct gggcttagaggcagttttggtcctgtgggaccagttggaccttctggaattcctgggcca atgggcctttcaggaaataagggactacctggaatcaaaggtgataagggtgaacaaggc atggcaggagaacaaggagaaccagggtatcctggagataagggcactgttggtttgcca ggactgccagggatgagaggaaagccaggactttcaggtcaaccaggtgacccaggacct caaggaccacctggccctccaggaccagagggttttccaggagatattgggattcctgga caaaatggccctgaaggaccaaagggactccttggaaacagagggcctcctggaccttct ggtctcaaaggaactcagggagaagaaggaccaatgggaccctttggagaactggggcct agaggaaaaccaggtcaaaaggggtctataggtgaaccaggaccagaaggcttaaaggga gaagtaggagatcaaggagatattggaaaaattggtgaaacaggacctgtcggtttacct ggggaagttggtacaactggaagcattggtgaaaagggagatcgtggcagtccaggccct ctgggtccccagggagaaaagggtgctatgggatatccaggtcctcctggggtaccagga ccaatgggtacattgggattacctggtcttgtaggggcaagaggatcacctggcagtcaa ggtcctaaaggacaaaggggacctagaggcccagacggtctcccaggagagccaggttta caaggtgccaagggtgaaaggggagatcaagggaaacgaggccctcctggtcttactggt aagactggaagccctggggagagaggaattcaaggaaaatcaggtttgcaaggaccccct ggaaatacaggagataaaggagttgcaggagaaccaggaccacgaggacttcaaggcgat gctgggccacctggagaaatgggtgttgagggacctccaggtattgaaggagagcctggt ctgcaaggcgatccaggtgcaaagggagatgtcggacctgcagggagtgttggaggaact ggggaaccagggttacggggtgaaccaggagctcctggagaagaaggtctccaaggaaaa gatggattaaagggaactcaaggaggcaggggttttccaggagaggatggagaaaaagga gatatgggcttacaaggaactccagggcccttgggtaaaccaggtcacatgggccttccg ggaccagaaggaattgtgggaattccagggcaaagaggtcgtccaggaaaaaagggtgat aaaggaaaagcaggacccactggagaagttggaagcagaggtgctcctggacagactggg gaaaatggtcctaagggtgcccgaggaactagaggtgctgtgggtcctataggattaatg ggacctgatggagagactggaattccaggttatagtggccatcaaggtcaaccaggactc tctgggtttccaggacctaaaggagaaaagggttacccaggagaagatagcgcagtccta ggaccacctgggcctcgaggtgaaccaggtccaatgggggaacaaggagagagaggagaa cctggagcagagggctataagggtcatgtgggtgtgccaggattaagaggtgctactgga caacaaggactcccaggtgagccaggtgaccagggtgaacaaggaccaaaaggagagagg ggatctgaaggccctaaaggcaaaaaaggagctcctggtcctcctggaaaacgtggggtt cctggacttccaggcccccctgggccaaaaggcatacaaggataccatggacaagatggg atttcaggaaatcctggaaaagttggcccaccaggaaaacagggacttcctggcatcaga ggcagccaagggaaaccaggactgagtgggtctccaggacctcgaggagtaaagggttca tcaggccctccaggaagtgctggaaggctaggcccaaagggtgaacaaggactacctggt caacctggaattcaaggtaaaagaggtcaccgaggagcacagggtgatcaaggaccgtgt ggagatcctggccttaaggggcagcctggagaacatggtgatcaaggcttgacaggtttc caaggattcccaggccccaaaggtccagagggggatgctggcagtgctggaatatcaggt cctaaaggccccacgggactgagaggaaacactggccctcttggcagagaaggcataata ggtccaacaggtagaactggacccagaggtgaaaaaggctttagaggtgaagctggcccc caaggaccaagaggtcaaccagggcctccaggtccacctggagcaccaggccctagaaaa caaatggatatcaatgctgctattcaagccttgattgaatcaaatgctgccctacagatg gagagctaccagaatactgaagtgactttaatcgaccacagtgcagagatattcaaaact ctgaactaccttagcaatttactgcacagcatcaagaatcctcttggcacaagagataac ccagcacgaatctgcaaagatttgctcaactgtgaacacaaagtatcagatggaaaatac tggattgacccaaatcttggatgcccttcagatgctattgaggttttctgcaatttcagc gctggtggccagacatgtttatctcctgtttctgtgacaaagttggagtttggtgttggg aaagtccagatgaacttccttcatttactgagctcagaagctactcatgtcatcaccatt cattgtctgaacactgcaaggtggacaagtacacaaacaagtggcccaggactgcccatt ggttttaagggatggaatggtcagatctttgaagaaaacactctacttgaacctaaagtg ctttcagatgactgcaagattcaggatggcagctggcataaggcaaaattcctttttcac acccaggaccctaatcaacttccagtggttgaagtacaaaaacttcctcatctcaaaact gaacaaaagtattacatcgaaagcagttctgtatgctttctctaa

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