Oryctolagus cuniculus (rabbit): 100355640
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Entry
100355640 CDS
T03373
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100355640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100355640
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100355640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100355640
NCBI-ProteinID:
XP_002717277
Ensembl:
ENSOCUG00000003046
UniProt:
G1SIX5
LinkDB
All DBs
Position
15:94125989..94141950
Genome browser
AA seq
440 aa
AA seq
DB search
MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS
CELVAPKLNRATEGILFCNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCMDTES
LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEER
DPVPLSIHHMPICVSFAFFQQGMYLLVDPTEREERVMDGLLVIAMNKHREICTIQSSGGI
MLLKDQVLRCSKIAGVKVAEITELIQKALENDQRVRKEGGKFGFAESIPNQRITAFKMEK
APVDTSDVEEKAEEIIAEAEPPSEVVSKPVLWTPGTAQIGEGIENSWGDLEDSEKEDEDE
GGSDEAVILDSMKMDTGIEVSDTGSQDAPIVLSDSEEEEMVILEPDKKTKKIRTQTTIGK
QEKAPSKKPMKKRKKKRAAN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacgccactctcaaactgcgagcgccgcttcctactccgtgccattgaagag
aagaagcggctggatggcagacagacctacgattataggaacataaggatctcgtttggg
acagattatgggtgctgtattgtggaacttgggaaaacaagagttcttggacaggtttcc
tgtgaacttgttgctccaaaactcaatagagcaacagaaggtattcttttttgtaacctt
gagctctctcagatggctgccccggcttttgaacctggcaggcagtccgatcttttggtg
aagttgaatcgactcttggaaagatgtctaagaaattcgaagtgtatggatactgagtct
ctctgtgttgttgctggtgaaaaggtttggcaaatacgtgttgacctacatttattaaat
catgatggaaatattattgatgctgcgagcattgctgcaattgtggctttatgtcacttc
cgaagacctgatgtgtctgtccaaggagatgaagtaactctgtatacaccagaagaacgt
gatcctgtgccactgagcatccaccacatgcccatttgtgtcagttttgccttcttccag
caaggaatgtatttattggtggatcccactgaacgagaagaacgagtaatggatggcttg
ctggtgattgccatgaacaagcatcgagagatttgtaccatccagtccagtggtgggata
atgctactaaaagatcaagttttgagatgcagtaaaatagctggtgtgaaagtagcagaa
attacagagctaatacagaaagccttggagaatgaccagagagttaggaaagaaggtgga
aaatttggctttgcagagtctataccaaatcagaggatcacagcatttaaaatggaaaag
gcccctgttgatacctcggatgtggaggagaaagcagaagaaatcattgctgaagctgaa
cctccttcagaagttgtttctaaacctgtgctatggactcctggaactgcccaaattgga
gagggaatagaaaactcttggggtgatcttgaagactctgagaaggaagatgaggacgaa
ggtggcagtgatgaagctgtcattcttgatagtatgaaaatggacactggaatagaagtt
tctgatactggaagccaagatgcccctatagtactctcagacagtgaagaagaagaaatg
gtcattttagaaccagacaagaaaacaaagaaaataagaacacagaccaccattgggaaa
caagaaaaagcaccaagtaaaaagccaatgaaaaagagaaaaaagaagagagctgctaat
taa
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