Oryctolagus cuniculus (rabbit): 100355708
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Entry
100355708 CDS
T03373
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100355708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocu03009
]
100355708
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100355708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Utp12
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_DCAF4
WDR54
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_like
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_RSE1_2nd
B-prop_COPA_B_2nd
Beta-prop_LRRK2
Utp21
DUF6832
YbaB_DNA_bd
Motif
Other DBs
NCBI-GeneID:
100355708
NCBI-ProteinID:
XP_002715756
Ensembl:
ENSOCUG00000007572
UniProt:
G1STC6
LinkDB
All DBs
Position
13:complement(46596758..46623564)
Genome browser
AA seq
943 aa
AA seq
DB search
MGLTKQYLRYVASAVFGLIGSQKGNIVFVTLRGEKGRYVAAPACEHVFIWDLRKGEKILI
LQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGG
RLASGSKDTDVIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDT
QHCFKTMVGHRTEIWGLVLVSQEKRLITGTSDSELRAWDISYLQEVEDQEEPEPKKIKGS
SPRLQDTLEAEDGNLEMDEAPEDRILSCRKAGSIMREGRDRVVNLAVDKTGRILACHGTD
SVLEVFCVLSKEEIQKKMDKKMKKARKKAKLNSCSGEEEDLEINVKMTLQDEIQRVANIK
TSAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLNPSLATPQPVRTSRITIGGHRSDVRT
LSFSSDNIAVLSGAADSIKIWNRSTLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGKLQL
YDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSV
KQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDIS
YDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDRKIKQW
DADKFEHIQTLEGHHQEIWCLAVSPNGDYVVSSSHDKSLRLWERTREPLILEEEREMQRE
AEYEESVAKEDQPAVPGETQGDSYFTGKKTIETVKAAERIMEAVELYREETAKMKEHKAI
CKAAGKEVPLPTNPILMAYGNISPSAYVLEVFKGIKSSELEESLLVLPFSYVPDILKLFN
EFIQLGSDVELLCRCLFFLLRIHFGQITSNQMLVPVIEKLKETTISKVSQVRDVIGFNMA
GLEYLKRECEAKSEVMFFADATSHLEEKKRKRKKREKLILTVT
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcaccaaacagtacctgcgctatgttgctagtgcagtctttggcctgattggc
agccaaaaaggtaacattgtctttgtgacactccgtggtgagaaaggacgctatgtggca
gcaccagcctgtgaacatgttttcatttgggacttaaggaaaggagagaagatcctcatc
cttcaggggctaaaacaagaagtcacttgcttgtgtccctccccagatggactgcattta
gctgttggttatgaggatggctccatccgaatcttcagtcttctgagcggagaaggaaat
gtgaccttcaatggacacaaagcagctatcactagcttgaagtatgaccagctaggaggc
aggctggcatctgggtccaaggacacagatgttattgtgtgggatgtgatcaatgaaagt
ggcctctaccgtttaaaggggcacaaggatgccatcacacaagcgctgttcctacgagag
aagaatctgctggttagtagtgggaaagataccatggtgaagtggtgggaccttgatacc
cagcactgcttcaaaacgatggttggccaccgaactgagatatggggattggttttggtg
tcacaagaaaagcgactcatcactgggacttcagacagtgaactgagggcttgggatata
tcctacctgcaagaggtggaagatcaggaagaaccagaacctaagaaaatcaaaggatct
tctcctagactgcaggacacactggaagcagaggatggtaaccttgaaatggatgaagct
cctgaggatcgcatcctttcatgcagaaaagctggttccataatgcgagaaggaagggac
agagttgtgaaccttgcagtcgacaagacaggcaggatccttgcttgtcatggcactgat
tctgtgctcgaagtgttttgtgtcctttctaaggaggaaattcaaaagaaaatggacaag
aagatgaagaaagctagaaagaaagcaaaattaaattcttgcagtggagaagaggaagac
cttgaaatcaatgtcaaaatgactctgcaagatgaaattcagcgagtagctaatatcaaa
acgtctgctaaaatcaaatcctttgatttgattcattcacctcaaggagagttaaaggct
gtcttcttgctgcagaacaacctggtggaattatactcactgaacccatccttggccact
ccccagccggtcaggaccagcagaatcaccatcgggggccatcgcagtgatgtgcgcact
ttgtcattcagctcagacaacatcgctgtcctttcaggagcagctgattccattaagata
tggaacaggtctacactgcagtgcattcgcaccatgacctgtgaatatgcgctttgttcc
ttctttgtacctggtgataggcaggtagtcataggaacaaagaccgggaagctgcagttg
tatgacttggcctcaggaaatctgctggagacaatagatgcccatgatggagctttatgg
tccatgtctctctctccagatcagcgtggctttgtgacaggtggtgcagataaatctgtc
aagttttgggattttgagttggtgaaagatgaaaatagtacccagaagagactttctgtg
aagcaaacccgaaccttgcaactagatgaagatgtcctgtgtgtcagttactctccgaat
caaaagctattggccgtgtctttgctggactgcactgtgaaaattttctatgttgacact
ttaaagttttttctctcactctatgggcacaaacttcctgttatatgcatggacatctct
tatgatggagcactgatagcaaccggctctgctgataggaatgtgaaaatctggggtttg
gactttggggactgccacaagtctctctttgcacatgatgacagtgtgatgtacctacag
tttgtacctaagtctcacctcttcttcactgctgggaaagaccgtaagattaagcagtgg
gatgcagacaaatttgaacacatacaaactctggagggacaccaccaggagatttggtgt
ttggctgtaagccccaatggagactatgttgtatcatcatcccatgacaaatctctgaga
ctttgggagagaacaagagagcctcttattcttgaggaagaaagggagatgcaaagggaa
gcagaatatgaggagagtgtggccaaagaagaccagccagcagttccaggggagactcaa
ggtgatagctactttactggaaagaaaactattgaaacagttaaagcagctgagaggatc
atggaggctgttgaactataccgagaagaaactgcaaaaatgaaagaacacaaagccatt
tgtaaagctgcagggaaagaggttcctcttcccacaaacccaatcctgatggcttatggc
aatatttctccttcagcttatgtattagaggtttttaaggggatcaagtcaagtgagttg
gaagaatctctacttgtgctgccattctcttatgtcccagacatccttaagctctttaat
gaattcatccagctgggctctgatgttgaacttctgtgtaggtgtctcttcttccttctc
aggattcactttggacagatcactagcaaccaaatgcttgtgccagtgatagaaaaatta
aaggaaacaactatttcaaaagtcagccaagtccgggatgttatcggcttcaatatggca
ggtcttgagtatctcaagagggaatgtgaggcaaaaagtgaagttatgttttttgctgat
gctactagccacttggaagaaaagaagaggaagcggaaaaagagggagaagctaatttta
acagtgacttag
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