Oryctolagus cuniculus (rabbit): 100355715
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Entry
100355715 CDS
T03373
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100355715
Membrane trafficking [BR:
ocu04131
]
Endosome - Lysosome transport
Others
Others
100355715
Endosome - Golgi transport
100355715
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100355715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
SUKH_6
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
100355715
NCBI-ProteinID:
XP_017202792
Ensembl:
ENSOCUG00000008453
LinkDB
All DBs
Position
15:10431475..11176278
Genome browser
AA seq
2864 aa
AA seq
DB search
MASEDSRVPSPPPTGDDGGGGGRREETSTGGAALSLKPGLPIRGIRMKFAVLTGLVEVGE
VSNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDVTCQAEVWSMFTAILK
KSIRNLQVCTEVGLVEKVLGKIEKVDHILADLLVDMLGVLASYNLTVRELKLFFSKLQGD
KGQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAF
TYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL
FAQLDYRQYLSDEVDLSICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSH
VSRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLMLYTYLSTEFI
GTVNIYNTIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLL
MFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRN
GLRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEIMLGHGLFSLLAERLMLQTNLI
TMTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSEEQKITEMVYAIFRILLY
HAVKYEWGGWRVWVDTLSITHSKVTFEIHKENLASMFRGQQGKVDEEIGLSSSGPVPAIS
GISRDVPASAGSQQSDKKDSPIYPHFTRNSGENSSNENTSSVETTSNVELQTHSTSIEER
KTEQENRELLDEVTLEETLTNEELNAGVLEASSDLREPITVSSSTFETAGKDTVTISEGT
ASVSSPSEGDATEMPELLDKSLVEEEDDDYVELKVESSPTEETSLPTEGQDNSLSPAASE
GSERLHEASTDCKLIFQEEDPVTEKPTGTEAQDSEDPGSLHVTASESSATSLETTVSQTA
VQSGMDQMLEEGKKTADSAGETNLDTDSHGNVFEASVTSEQKIAKLDVSSVASDTERLEL
KANTSMEAVQPHRQMLEVPRQQEQPVRGPVPEAVNGQRRDSRSTMFRVPEFKWSQMHQRL
LTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPL
LSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGG
ILRQCLRLVCAVAVRNCLECQQHSQLKCRGDAAKVLKTIHSMIPVGKSAAKSPVDIVTGG
ISPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQN
ERRSQSCKETGSENETVSLPDVENTPASFSPSTPASVEESESTSSARRRDSGIGEEASTG
LGSNVDVTPQAAPPSVSAGPDAISEVLCTLSLEVNKSQETRNDGGNELDNKATLPVPVSK
NVNVKDILRSLVNIPADGVTVDPALLPPACLGALGDHLSVEQSVQFRSFDRSVIVATKKA
AVLPSTLATSVPANAVSVVSSVDSAQASDVGGESPGNGSSNARLPSVPTVGSVPQDPVSN
MSITERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVEL
VMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHR
HAEFESLCAQYSADKREEEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAV
SRPREFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHAADEDILAKGKQSIKSHA
LGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSVVVQGTLSVTSSEL
YFEVDEEDPSFKKIDPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVAVM
FNFPDPATVKKVVNYLPRVGIGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFE
YLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPVGALNPKRAAFF
AERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSVS
RAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFV
RINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSITDPVLR
EAVEAQIRSFGQTPSQLLIEPHPPRGSAMQAYLLLQSPLMFTDQAQQDVIMVLKFPSNSP
VTHVAANTQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIATST
GMHRRQITDLLDQSIQVHSQCFVVTSDNRYILVGGFWDKSFRVYSTDTGKLIQVVFGHWD
VVTCLTRSESYIGGNCYILSGSRDATLLLWYWNGKSSGVGDNPGSETTTPRAILTGHDYE
VTCAAVCAELGLVLSGSQEGPCLIHSMNGDLLRTLEGPENCLKPKLIHASREGHCVIFYE
NGLFCTFSVNGKLQATTETDDNIRAVQLSRDGQYLLTGGDHGVVMVWQVSDLKKLFAYPG
CDAGIRAMALSHDQRCIIAGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacagccgtgtcccttccccgccaccaacaggtgatgacgggggaggt
ggagggagaagagaagagacctccaccggaggagctgcattgtctctgaagcctgggctc
cccatcaggggcatcagaatgaaatttgccgtgctgacggggctggtcgaagttggagaa
gtatccaatagggatattgtagaaactgtctttaacctgctggttggagggcagtttgat
ttggaaatgaatttcattatccaagaaggtgagagtatcatctgcatggtggacctgctg
gagaaatgtgatgtcacttgccaagctgaagtatggagcatgtttacagccattctgaag
aaaagcatacgcaaccttcaggtctgcacggaagtaggccttgttgagaaagtgctggga
aagatcgaaaaagtcgaccatatactagcagatcttttagttgacatgttgggagtgctg
gctagctataatctgacagttcgagaacttaagctattcttcagtaaacttcaaggagat
aaaggacaatggcccccacacgctggcaagttgctgtctgtgttaaagcatatgcctcag
aagtacggccctgatgcctttttcaactttccaggaaagagtgctgcagctattgcatta
cctcctatagccaaatggccataccagaatggttttacatttcatacctggcttagaatg
gatcctgtaaataacatcaatgtagataaagataaaccttacttgtattgtttcagaacc
agcaaaggtcttggttattctgctcattttgttggagggtgtttgattataacatcaata
aagtcaaaaggaaaaggctttcaacactgtgtgaaatttgatttcaagccacaaaagtgg
tatatggtaactatagtacacatttataaccgatggaagaacagtgaacttcgatgttat
gtgaatggtgagctggcttcctatggagaaataacatggtttgtcaacaccagcgatact
tttgacaagtgtttcctgggctcctcagaaaccgctgatgctaatagagtattctgtggc
cagatgacagcagtttacctgtttagtgaagctctcaatgcagctcagatatttgccatt
tatcagttgggcctgggatataagggtacatttaaattcaaagcagaaagtgaccttttc
cttgcagaacatcacaaacttctattgtatgatggcaaactctctagtgccattgcattt
acttacaacccacgggctacagatgcccagctttgcctcgaatcatctcccaaggacaac
ccttcaatttttgttcattcaccacatgcactcatgctccaggatgtaaaggcagtttta
acacattccatccaaagtgctatgcattcaattggaggtgtacaagtgctgtttccactt
tttgcacagttggattataggcagtatttatctgatgaggtcgacttgagtatctgttca
accttgctggccttcatcatggagttgttgaagaactcaattgccatgcaggagcaaatg
cttgcctgtaagggcttcttggtaataggatacagccttgaaaagtcttccaaatcccat
gtcagcagagcagtacttgaactttgccttgcattttcaaaatatctcagtaatctgcag
aatgggatgcctctactcaagcaattgtgtgatcacattcttcttaaccctgccatatgg
attcataccccagccaaggttcagttgatgctgtatacttacctgtccacggaattcatt
ggtacggtcaacatctataatactattcggcgagttggaacagtgcttctcatcatgcac
acactgaagtactactactgggcagtgaatcctcaggatcgaagtggtatcaccccgaaa
ggattagatggaccacggcctaatcaaaaagaaatactttctctgcgtgcattcttgttg
atgttcattaagcagttagtgatgaaggattctggagtaaaggaagatgaactacaggcc
attcttaattatctactgactatgcatgaggatgacaatctaatggatgtcctacagctg
cttgttgcattaatgtcagagcatcctaactctatgattcctgcttttgaccaaaggaat
ggcttacgtgttatctacaaactgctggcatctaaaagtgaaggaatcagagtacaagct
ctcaaggcaatgggctattttttaaagcatctggccccaaagagaaaagctgaaatcatg
cttgggcatggattattttcactgctagctgaacgactcatgcttcagacaaatttaatc
acaatgaccacatataatgtcctgtttgagattcttatagaacagatttgtactcaagtg
atacataagcagcatccagatcctgattcttctgtaaagatacaaaaccctcagatactg
aaagtaattgcgaccttgcttcgaaattctccccagtgcccagaaagcatggaggttcgc
agagcctttctttctgacatgattaaactttttaataacagtagagaaaacaggaggagc
ttgctacagtgttctgtgtggcaagaatggatgctttctctctgctattttaatcctaag
aattcagaagagcaaaagataacagaaatggtatatgctatattcagaatcctactttac
cacgcagtaaaatatgagtggggtggctggcgtgtatgggtagacaccttatcaatcaca
cattcaaaggtcacttttgaaatacacaaagagaaccttgccagcatgtttaggggacag
cagggaaaggttgatgaggaaatagggctaagctcttcaggtcccgttccagcaatctct
ggaattagcagggatgttcctgcttcagcggggtctcagcaatcagacaagaaggattcc
cccatctatccccattttaccagaaacagtggtgaaaactcaagtaatgaaaacactagt
tcagtagaaacgacatctaacgtcgaactgcagactcatagtacctctattgaagaaagg
aaaactgagcaggaaaatcgggagttactggatgaagtcactttggaagaaacactgaca
aatgaggaactgaatgcaggtgttttagaagcatcttctgacctaagagaacctataact
gtttcctctagtacttttgaaacagctggcaaagatacagtgaccatcagtgaaggaacg
gcatctgtaagctctccttcagaaggggatgctacagagatgccagaattattggataag
tctctggtagaagaggaggacgatgattatgtggaactgaaggtggaaagcagtcctact
gaggaaaccagcctgcccacagagggccaagataatagtttgtctccagctgcatccgaa
ggcagtgaaagactgcatgaagctagtactgactgcaaattaatattccaagaggaagac
cctgttacggaaaaaccaactggtactgaagctcaagattctgaagatcctggatccctg
catgtaacagcttcagagtcttcagctacttctctagaaactactgtttcccaaacagct
gtgcagtcaggcatggatcagatgttggaggaaggaaagaaaacagccgactctgctgga
gaaaccaacttagacactgatagtcatggtaatgtttttgaagcttctgttacttctgag
cagaagattgccaagttagatgtttccagtgttgcttcagataccgagagactggaattg
aaggctaatacaagcatggaagcagttcagcctcatcgacaaatgcttgaggtaccaagg
caacaggagcagccagttcgaggaccagtaccagaggcagtcaatggacaaaggagggat
tcaagatctaccatgtttcgtgttcctgagttcaagtggtctcagatgcatcagcgtttg
ctcactgatctgttattttcgatagaaacagatattcagatgtggaggagccattcaaca
aagacagttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaatt
catctcatctctcaagtgatggacaatatggtcatggcttgtgggggtatactgccattg
ctttcagctgctacatcggctacacatgagctggagaatattgagcctactcaaggcctt
tcaatagaagcctctgtgacatttttgcagaggctcattagccttgtggatgtgcttata
tttgcaagttctcttggctttactgaaattgaagctgaaaaaaacatgtcatctggagga
attttgcggcagtgtctccgactggtatgtgcagtggcagtaaggaattgcttagagtgt
caacagcattcacagttgaaatgtaggggagatgcagcaaaagtcctgaaaacaattcac
agtatgattcctgtggggaaatctgcagcaaagagtccagtggacattgtgactggtgga
atatctccagtaagagatcttgacaggcttctacaagatatggatattaatcgacttagg
gcggttgttttcagagatatagaggatagcaaacaagcccaattcttagctttggcagtt
gtgtattttatatctgttctgatggtctcaaagtacagagacattttggaacctcaaaat
gaaaggcgtagccagtcatgtaaagaaactggaagtgaaaatgagactgtatcactccct
gatgtggaaaacacaccagcatcattcagcccttcaactccagcctcagtagaagaatct
gaaagtacatcatctgctcgaaggagggattcaggcattggagaagaagcctctactggt
ttaggaagcaatgtggatgtaactcctcaagcagcacctccgagtgtcagtgcaggccca
gatgcaatcagtgaggtgttatgcactctttctttagaagtcaataaatctcaggaaacc
agaaatgatggaggaaatgagttggataacaaggctacactaccagttccagtttcaaaa
aatgtcaatgtgaaagacattctccgaagcttggtaaacatcccagcagatggagtcaca
gtggatcctgcccttctgccaccagcctgtctgggagctcttggtgatcacctatctgtt
gaacagtctgtacagttcagatcttttgacagaagtgtcattgttgcaacaaaaaaagca
gcagtcttaccttccacccttgctacgagtgtacctgccaatgctgtgagtgtggtttcc
tcagtagattcagcccaggcctcagatgtgggtggagaatcaccaggtaacggatcatct
aatgcaagattgccttcagttccaacagttggatcagttccacaagatccagtttcaaat
atgagtattacagagaggcttgagcatgctttggaaaaagcagctcctcttctgcgagag
atttttgtagattttgcaccttttctttctcggacacttttgggtagccatggacaagaa
ctgcttatagaaggaacaagtctggtttgcatgaagtctagtagttcagttgtggaattg
gttatgctactgtgttctcaggagtggcagaattctattcagaagaatgcaggccttgct
tttattgaacttgtgaatgaaggaaggttgcttagccaaacaatgaaggatcatcttgta
agagtagcaaatgaagctgaatttatcctgagcaggcagagggcagaggatattcacaga
catgcagaatttgagtcactgtgtgcccagtattctgcagacaagcgagaagaagagaag
atgtgtgatcatttgataagagcagctaaatatcgagaccacgtgacagcaactcaacta
atccagaaaatcatcaacattctcacagacaagcatggagcctggggaaattctgcagtg
agtcgtcctcgtgagttctggcgccttgactactgggaagatgacttgcggcgccggcga
cgatttgtgcgtaaccctctaggatcgacacatcctgaagcgacactaaaaacagccgtg
gaacatgctgcagatgaagatatccttgctaaaggaaaacagtccatcaagagtcacgct
ttaggaaatcagaactcagaaaacgagatcctcctggaaggcgacgatgatactctgtca
tccgtggatgagaaagatttagaaaatcttgccggtcctgtcagcctgagcacaccagct
cagctggtggccccctctgttgtagtccagggcactctttctgtcacctcctctgaactc
tattttgaggtggatgaagaggatcctagcttcaagaaaatcgaccccaagattctggca
tatacagaagggctgcatggaaaatggctgttctcagagatacgatcaattttctctcgt
cgttatcttttgcaaaatacagccctggagatctttatggcaaacagagttgctgtaatg
ttcaacttcccagaccctgcaacagtaaagaaagtggttaactatctaccacgtgtcgga
attggaaccagttttggattgcctcaaacaaggcgtatttcattagctagtccacgtcaa
cttttcaaagcttctaatatgacccagcggtggcaacacagagagatttcaaatttcgaa
tacttgatgtttctcaacacaatagcaggacggagttacaatgacttgaatcagtatcca
gtgtttccctgggtcatcactaactatgaatcagaagaactggatctgaccttgccaagc
aacttcagagatttgtccaagccggtaggagctttgaatcccaaaagagcagcgttcttt
gcagagcgttatgaatcatgggaagatgatcaagttccaaagttccactatggaactcat
tactccactgcaagttttgttcttgcatggctgctaagaattgaaccctttacaacatat
ttcctaaatttgcaaggaggtaaatttgatcacgcagatcgaactttttcatcagtttcc
agagcgtggcgaaacagtcagcgtgatacatctgatattaaggagttgattcctgaattt
tactatcttcctgagatgtttgtcaacttcaataactataatcttggagtgatggatgat
gggacagtagtgtctgatgttgaacttcctccttgggccaaaacctcagaagaattcgtt
cgcataaacagattggccttggagagtgaatttgtttcctgtcagcttcaccagtggatt
gatctcatttttggctacaaacagcaaggaccagaggctgtccgagccctcaatgtgttc
tattacctgacctacgaaggcgctgtcaatctgaattcaataactgatccagtgttgaga
gaggctgtcgaagctcaaatccggagttttggacagacgccctctcagctcctcatagag
ccccaccctccccgaggttctgccatgcaagcctatctcctcctgcagagtccactgatg
ttcacagaccaagcccagcaggatgttatcatggtcctaaagtttccctccaactcccct
gtcactcatgtggcagccaacacccagccgggtttggcaacccctgctgtgatcacagtc
actgctaataggctatttgccgtgaacaagtggcacaaccttcctgctcatcaaggtgct
gtacaagaccagccataccagctgccagtggaaatcgatcctctcatagccaccagtacg
ggaatgcacaggaggcaaatcactgacctgttggaccaaagtattcaggtccattcccag
tgctttgtcgtcacttcagacaaccgctacattctcgtcggcggcttctgggataagagt
ttccgagtctactctacagacacaggaaaattgatccaagttgtgtttggccattgggat
gtcgtcacttgcctcactcgttctgagtcatacattgggggaaattgctacattctctca
gggtcacgtgatgcaacccttctgctgtggtactggaatggaaaaagcagtggggttgga
gataacccaggcagtgagaccacaactcctcgggccatcttgacaggccacgactatgag
gtcacatgtgcagcggtgtgtgcagagctgggcctggtgttgagcggctctcaagaaggg
ccgtgcctcatacattccatgaatggagacctgttaaggaccttggagggccctgaaaac
tgcctgaaaccgaagctcatccacgcctccagggagggtcactgcgtcatcttctatgaa
aacggcctcttctgcaccttcagcgtgaacggaaaactccaggccaccacggaaaccgat
gacaacataagagccgtccagctgagccgcgacgggcagtacctgctcacagggggagac
cacggcgtggtgatggtctggcaagtgtctgacctcaagaagctctttgcctatccaggc
tgcgacgccggaatccgggccatggctctgtcccacgaccagaggtgcatcattgctggc
atggcttcaggcagcatcgttctgttttacaacgacttcaaccggtggcatcacgaatac
caaacccgctactga
DBGET
integrated database retrieval system
