Oryctolagus cuniculus (rabbit): 100355904 Help Entry 100355904         CDS       T03373                                  Name (RefSeq) helicase SRCAP   KO K11661   helicase SRCAP/SWR1 [EC:5.6.2.-] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     100355904  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:ocu03036]     100355904 Chromosome and associated proteins [BR:ocu03036]  Eukaryotic type   Chromatin remodeling factors    SRCAP complex     100355904    SWR1 complex     100355904 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HSA ResIII DEAD HDA2-3 Na_trans_assoc DUF7091 Motif Other DBs NCBI-GeneID:  100355904 NCBI-ProteinID:  XP_051690979 Ensembl:  ENSOCUG00000004689 LinkDB All DBs Position Unknown AA seq 3235 aa AA seqDB search MQSSPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPASSRAGGISPQHIAQDSSLDGP PGPPDGATVPLEGLSVPQVLFLSVQKLSADLALPPQEAEIETRIAELRKEGFWSLKRLPK VPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARRE EQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDL LSQSLNQPLPSSKACSSPCLGSSSAASSPPHPASRLDEEDGDFQPQEEEEDDEETIEVEE QQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGGPSSPSQTPSSHDSDTQDGPEE GGEGEPVQELEVKAPPSVTQRNKQPWHPDEDDEEFTANEDEAEDEEDTIAAEEQLEGEVD HAMELSELAREGELSVEELLQQYAGAYASDASVPGSESSDDEEEEDIEVNSSECEAEGVT ETEEAAQDESSSPSDSAEDQSEEEEEEQSEEEETSGSSESEESESDESEDAQSQSQEEEE EEEEEEDFGVEYLLARDEEQSEADGGSGPPTPGPTTTLGPKKEITDIAAAAESLQPKGYT LATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHL ACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHV CITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQN SLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRR VKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKV CNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLIGLEGRVSRYEA DTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNSPRTPVG PVPIRPPPGPELSAQPTPGPSPPVLPAPLMVSAPPAGPPHIPASRTPGPVLLPPLQPNSG PLPQVLPSPLGVLSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFP PAAATTTSATTVTAATTAVPAPAPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVAS AGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQPAHVALI QAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDG LTAVPPLAPAPRPPSSGLPAVLTPRPTLTPGRLPSPTLGPARSPIPTTTLVRPLLKLVHG SSPEVSASAPGAAPLTISSPLHVPSSLPGSASSPMPIPNSSPLASSVPSTVPVPVPVSSA LPISVPTTLPASTPLTIPISAPLPVSASGPALLTNVTPALAPVVSAAPGPPSLAPAAASP SASALTLGLATAPSLSPSQTPGHPLLLAPTSPHVPGLSSAVAPACSPVLVPASALASPFP AAPNPAPAQASLLAPAPSASQALANPLAPMAAPQTAILAPPAPSLAPLPVLAPSPGPAPI LAPSQTPVPVMAPSSTPGTPLASASSLVPTSTPMLAPPSTQTMVPAPVPSPLPSPASTQT LALAPALASTLGGSSPSQTLSLGMGNPQGPFPTQTLSLTPASSLLPTPAQTLSLAPGPAL GPTQTLSLAPAAPLAPASPMGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPVPAL GPAAAQTLALAPASTQAPASQASSLVVSASGTSPLPVTMVSRLPVPKDEPETLTLRSGPP SPPSTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALAPVY GTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAAHRAVLFPQQRLDQLSEIIERFIF VMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLSCELWPRARPLHRIVCNMRTQFPDLRLI QYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQR QALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT RDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPVEEPS GSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFP AGEGEEASRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQ VEAARKDLDQAKEEVFRLPQEEEEGPGAGDDISCGTGGGSHRRSKKAKAPERPGTRVSER LRGARAETQGANHTPVTSTHQTRSTPTPPCSSPARERVPRPAPRPRPTPASAPVAIPTPI PVPVSVPIPISAPNPVTILPVHILPSPPPPPAQIPPSCSSPACTPPPACTPPPAHSPPPV QTSLLIPSSPLLLGPPSRPLSPPVSNLTLALGPEAELCAQTLASAEAEELGGSTSSETAQ LAPGPPADLLPAAVEIPPVSEKNPSLTACAPSPTLEAGSVPNGQEREVPEPAQEPVLTVL PDAEELSACLSESNGLELPPAAACDEPLQEPLDADRNSEELVDSQTPTSTPEKPQELVTA EATAPSTSSSATSSPESPSPARPPRRRTSADVEIRGQGAGRPGQPPGPKVLRKLPGRLVT VVEEKELVRRRRQQRGASSTLVPGVSETSASPGSPSARSVSGPESSPPTSGACEAAPSSS LPTPPQQPFIARRRIELGVAGGGSPENGEGALLAITPPAVKRRRGRPPKKNRSPADSGRG VDEALSSTSKGKANGADPIPGAETLIVAEPVLGPQLLPGSQPLGPQPVHRPEPLILSPVE KRRRGRPPKARDLPIPGTISSPGDGSLESRTQPLPLPPPLPPLPPLLACSTATVTNTVTT VTVSTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSASVLEGCGGGRQRQPQGQGESEGSSS DEDGSRPLTRLARLRLEAEGTRGRKSEGSMVVAVIQDDLDSADSGPGGLELTPPVVSVPP KLRSTRLRPGSLVPPLETEKVPRKRAGAPIGGGPGLAKRGRLQPPSPLGPEGSVEESEAE ASGEEEEGDGTPRRRPGPRRLVGTTNQGDQRILRSSAPPLLAGPTVSHRGRKAKT NT seq 9708 nt NT seq  +upstreamnt  +downstreamnt atgcagagcagcccctcccctgctcaccctcagctcccaattctacagacacagatggtg tcggacggcatgacaggcagtaatcctgtgtcccctgcctcatccagctccccagcctct agtagggcaggtggcatctcccctcagcacatagctcaagattcctctctggatggacct ccaggccccccagatggtgccacggtgccgctggaggggctcagcgtgccacaggtgctt ttcctgagtgtgcagaaactgtcggctgacctagctcttcctcctcaggaagccgagatt gagactcggattgctgagctgcggaaggagggtttttggtcactgaagaggttgcccaaa gttccagagccccctcgccccaaaggccactgggactacctgtgtgaagagatgcagtgg ctgtctgctgacttcgctcaggagcgccgttggaagaggggtgtggcccggaaggtggtg cgcatggtgatccggcaccacgaggagcagcgccagaaagaggaacgggcccggagggag gagcaggccaagcttcgacgaattgcttccaccatggccaaagatgtcagacaattctgg agcaacgtggagaaagtggtgcaattcaagcaacagtcgcgacttgaggaaaagcgcaaa aaagccttggatctgcacctggacttcattgttgggcaaactgaaaaatactcggacctt ctgtctcagagcctcaaccagcctctgccctccagcaaagcttgttcttctccttgcctt ggctcttcctcagctgcctccagtcctccacacccggcttcccggctggatgaggaagat ggggacttccaaccccaagaggaggaagaggatgatgaggagacgattgaggttgaagaa caacaggaaggcaatgatgcagagacccagaggcgtgagattgagctgcttcgacgtgag ggagaactgccattggaagagctgctgcgctcgctcccacctcagctgctgggcgggcct tccagcccctcccaaactccctcatctcatgatagtgacacccaggatggacctgaggaa ggtggtgaaggagaacctgttcaagagttggaggtgaaggctcctccttctgtcacacag cgcaataaacaaccttggcatccagatgaagatgatgaagagtttactgccaatgaggat gaagcggaggatgaagaggacaccatagcagctgaggagcagctggaaggggaggttgat cacgccatggagctgagcgagttggctcgagaaggtgagctctctgtggaggagctgctg cagcagtatgcaggagcctatgcctctgacgcctctgtccccggctcagagagcagtgac gacgaagaggaagaggacattgaggtcaacagctccgagtgtgaagcagagggggtcacg gagactgaagaggctgctcaggatgagtccagcagtccgtcagactctgcagaggaccag agtgaggaggaggaggaggagcagtcagaggaagaagaaacgagcgggagttcagaatcg gaggagtctgagtccgatgagtctgaggatgcccagtcgcagagccaagaggaggaagag gaggaggaggaggaagaggattttggggtggagtacctgcttgcccgggacgaagagcag agtgaggcagatgggggtagtgggcctcctaccccagggcccaccaccactctgggccct aagaaagaaattaccgacattgctgcagcagctgaaagtctacagcccaagggttatacc ttggccactacccaggtgaagacacctatccccctgctcttgcggggccagctccgtgag tatcagcacattgggctggactggctggttactatgtatgagaagaagcttaatggcatt cttgccgatgagatggggctggggaagaccattcagaccatctccctgcttgcccacttg gcctgtgagaaaggtaactggggtccccatttaataattgttcccaccagcgtgatgttg aactgggagatggagttgaaacgttggtgccccagctttaaaatcctcacttattatgga gcccagaaagagagaaagctcaaacgacagggctggaccaagcccaatgccttccacgtg tgtatcacatcttacaagctggtgctgcaggaccaccaggcgttccgccgcaagaactgg cgctatctcattctggatgaggctcagaacatcaagaacttcaagtcacagcgctggcag tcactgcttaactttaacagccagaggcgcctgctcctgacaggaactcccttgcagaac agcctcatggagctgtggtccttgatgcactttttgatgcctcatgtcttccagtctcat cgcgagttcaaggaatggttctctaaccccctaactggcatgattgagggcagccaagaa tacaatgaaggtctagtcaaacgcctccacaaggttttgcgaccttttctgctgcgccga gttaaagtggatgttgagaagcagatgcctaaaaagtatgagcacgttatccgctgccgg ctctccaaacgccagcgctgtctctatgatgacttcatggcacagacgacaactaaggag acactagccacaggccatttcatgagtgtcatcaacattttgatgcagctgcgaaaagtt tgcaatcatccaaatctgtttgatcctcgacctgttacctccccctttatcaccccaggc atctgcttcagcaccgcctctctggtgctaagggctactgatgtccaccctcttcagcga atagacatgggtcggtttgacctcattggcctggagggtcgtgtttctcgatacgaggct gacacatttctgccccggcaccgcctctcccgccgggtcctgctagaggtggctactgct cctgaccccccaccccggcccaagcccgtcaagatgaaggtcaacaggatgttgcagcct gtccccaagcaagaaggccgtacagtggtggtggtgaatagtccacggacgcccgtaggc cctgtccccatccgaccccctccaggccctgagctctcagctcagcccacccctggccca agtcccccagtgctgccagcaccactgatggtgtcagccccgcctgccggacccccacat attcctgcatcccggacccctggtcctgttctcttgcctccactgcagccgaacagtggt cctcttcctcaggtgttgccatcccccctgggggtcctgagcgggacctcaaggcctccg acgccaactctgtccctgaagccagccccgcctgccccagttcgcctgagtccagcccca cccccaggctcctctagcctgttgaagcccctgactgtgccaccaggctacactttccct cctgctgctgcaactaccacctctgccaccactgtgactgctgccaccacagcagtgcca gctccagctcctgccccacagcgcctcatcctgtctcctgatatgcaggctcgtctgccc tcaggtgaagtggtcagcatcgggcagttagcctcactggcgcagcgtccagtggctagt gcaggtggaagcaaacctctcaccttccaaatccagggcaacaagctgactttgactggt gcccaggtgcgccagcttgctgtggggcagccccgcccgctgcaaaggaatgtggtgcat ctcgtgtcagcaggggggcagcaccacctcatcagccagcctgcccatgtggccctcatc caggccgtggccccgacccctggccccacccctgtctctgtgctgccttcttcgaccccc agcaccacccccgcccccacaggcctcagccttccgcttgctgctaaccaggtgccaccc accatggtgaataatacaggcgtggtgaagattgtagtgagacaggcccctcgggatgga ctgactgctgttcctccgttggccccagcaccccggcctccgagttctgggcttccagct gtgttgactccacgccccacgttgacccctggccgccttccctcacctactctgggtcct gcccggtctcccattcccacgaccactctggtgaggcctcttctcaagctggtccatggt tcttcgcctgaagtcagtgcttcagcacccggagctgctcccttgaccatctcttctccg ctccatgtgccatcctcactccctgggtcagcctcttctcccatgccaattcccaactcc tctccccttgctagttctgtgccctcgacagtcccagtcccagtcccagtgtcatcggca ctccccatctctgtccccaccacgcttcctgcctcgactccgctaaccatccccatctca gcccccttgcctgtttcggcatcgggtccagctcttttgaccaatgtgactccagcactg gcaccagttgtctcagcagcgcctggacctccctctttggcaccagctgcagcttctccg tcagcgtcagccttgactctaggtttggccacagctccgtccctgtccccatctcagaca cctggtcaccctctgttgttggctcccacctctccacatgttccagggttgagctcagct gtggccccagcgtgctcgccggtcctggtgccagcttcagctctggccagtccttttcca gcagcgccaaatccagctccagcccaggcttcccttctggctccagcaccttctgcatct caggctttggccaaccctctggctcctatggcggctccacagacagcaatcctggctcct ccagctccttctctggctcctcttccagtcctggctccatcaccaggtcctgctcccatc ctggctccatcacagactccggttccagttatggctccatcatctactccaggaacccct ttagcttcagcttcttcactggtgccaacctcaactcctatgttggctccgccatcaact caaaccatggtaccagccccagttccatcacctctcccgagcccagcttctacgcagaca ctggccctagccccggctttagcatccactcttggtggctcgtctccatctcagacactt tctttgggcatggggaacccccaggggccctttccaactcagacattgtcattgactcca gcatcatccttgctaccaactccagcccagacactgtctttggcaccaggaccggcacta ggcccaacgcagacgctgtctttggctccagcagcgcctctggctccagcttctccgatg ggcccggccccagctcacacgctgactttggctccggcatcgtcatctgcttcactcctg gccccagcttcagtacagacactgaccctgagccctgccccggttccagtgcccgccctg ggcccagctgcagctcagactctggcactggccccagcgtcaacacaggccccagcttcc caggcatcttccctcgtggtttcggcatctggcacctcccccttgcctgtcaccatggta tcccgactgcctgttcccaaggatgagcctgaaacactgactttgcgctctggtcccccc agccctccctccactgctacctcgttcagtggcccccggcctcgacgccagcccccccca ccacctcgttcccctttctatctggactctctggaggaaaagcggaagcggcaacgatct gaacgcctggaacggattttccaacttagtgaggctcatggggccctggcacccgtgtat gggactgaagtcctggatttctgtaccctgccccaacctgttgccagccccatcggccct cgttctcctggccccagccaccccaccttttggacttataccgaggctgcccaccgggct gtactgtttccccagcaacgactagaccagctgtcagaaatcattgagaggttcatcttt gtcatgcctcctgtggaggcacctcccccttccctacatgcctgccacccacctccctgg ctggccccacgtcaggcagccttccaggagcagctgtcctgtgagctctggccacgagct cgtcctttgcaccgcattgtgtgtaacatgcgcacgcagttccctgatttgaggctcatc cagtatgattgcggaaaactgcaaacgttggcagtgttgctgcgacaactcaaggcagag ggccaccgggtgcttatctttacccagatgacccgaatgctggatgtgttggagcagttt ctcacctaccatggccacctctacttgcgtctggatgggtctactagagttgaacagaga caggccttgatggaacgattcaatgcagacaaacgcatattctgcttcatcctttcaact cggagtgggggtgtgggcgtgaacctgacaggagcagacactgttgttttttatgacagt gactggaatcctaccatggatgctcaggcccaggaccgctgtcatcgcattggccagacc cgcgatgtccacatctacaggcttatcagtgaacggacagtggaggagaacatcctgaaa aaggcgaatcagaagagaatgttgggagacatggccattgagggaggcaacttcaccaca gcttatttcaaacagcagaccatccgagaactgtttgatatgcccgtagaggagccgtct ggctcatcggtgccctctgcccctgaggaagaagaagagactgtggccagcaagcagacc catattttggagcaggcattatgtcgagcagaagatgaagaggatatccgtgctgccacc caggccaaggctgagcaggtggctgagctggcagaatttaatgagaatgacggatttcct gctggtgagggcgaggaggccagtcggcccggggctgaggatgaagagatgtctcgggct gaacaggagattgctgcccttgttgaacagctgacccccattgagcgctatgccatgaaa ttcctggaagcatccctggaggaggtgagccgagaagaactcaagcaggcagaagagcaa gtggaagctgcccgcaaagacctggaccaagccaaggaggaggtgttccgcctaccccaa gaggaggaggaggggccaggggctggggatgatatttcctgtgggactggtggaggcagc caccggcgcagtaagaaggccaaggcccctgagaggccgggaactcgtgtcagtgaacgt cttcgtggagcccgggctgagactcaaggggcaaaccacactcctgtcacatccacccat caaacccgcagcacgcccacacccccctgctccagccctgccagggagcgcgttcccagg ccagcacccaggcctcgacccactccagcttcagctcctgttgcaattcctaccccgatc cccgtcccagtctctgtcccaatacctatttcagccccaaatccagtaaccattcttcct gtccatatcttaccttctcccccacctcctcctgcacagattcctccctcctgttcttct cctgcctgtacccctcctcctgcctgtactcccccgccagctcattcccccccaccagtc caaacttctctcttaattccttcctctcctctcctgcttggtcccccttccagacccctt tctcccccagtttctaacctcaccttggctttggggcctgaggcagaactgtgtgcacag acgttggcatctgcagaggccgaggagctgggtggctcgaccagttctgagactgcccag cttgcgcccgggcccccagcggatctgttgccagctgctgtcgagatcccgcctgtttca gagaagaacccttccctcaccgcttgtgcacctagcccaaccctggaggctggcagcgtc cccaatggtcaggagcgggaggtcccagagcctgcccaggagcccgtcctcacagtgctg cccgatgctgaggagttgtcggcgtgtttgagtgagagcaatggacttgaactcccaccc gcagcagcgtgtgatgagccgcttcaggagccgttagacgcagacaggaactcggaagag ctggtggactcccagacgccaacctccaccccggaaaagccacaggagcttgtcacagct gaggctacagccccgtcaacctcatcttcagccacctcctcacccgagagcccttcacct gcccgccccccgcggcggcgcaccagtgctgatgtagaaattaggggccagggggctggt agaccagggcagcctccaggccccaaagtgcttcggaagctgccaggacggctggtgacc gtggtggaggagaaggaactggtgagacgacggcgacagcagcggggagcctctagcacc ctcgtgcctggtgtgtctgagaccagtgccagcccaggaagcccgtccgcccgcagcgtg tcagggccagagtcctcgccgcccaccagcggggcctgtgaagctgctccctcgtcctca ctgcccaccccaccccagcagcccttcatagctcgtcgtcgcattgagctgggggtggca ggtgggggcagcccggagaacggagaaggggcactgctcgccatcaccccacctgctgtg aaacggcggcgggggaggccccccaagaagaacaggtctccagcagattccgggagagga gtggatgaggcgctctcctccacttcgaagggaaaagccaatggggccgatcccatccct ggggccgagaccctgattgttgcggagcctgtcctggggccccagcttcttcctgggtcc cagcctcttggaccccagccggttcacagacctgagcccctcatcctgtcacctgtggag aaaagaaggcgtgggcggccccctaaggctcgagatttgcccatccctgggaccatttcc tctccgggggatggcagcttagagagccggacacagccactcccgctaccaccacccctg ccaccactccccccactgctagcctgttccactgctactgtcaccaacactgtcaccact gtcaccgtttcaacatccccacccaagcggaagcggggccgacctcccaagaacccaccg tcacctcggcccagccagctccctgtcttggaccgtgacagcgcctctgtgctcgaaggc tgtggcggggggaggcagcggcagccccagggccagggggagagtgagggtagttcatct gacgaagatggaagccgccctctcacccgcctggctcgcctgcggctcgaagcggaggga acgcggggacggaagagtgaagggtccatggtggtggccgtgattcaggatgacctggac tcagcagatagtgggccaggcgggttagaattgacacctcctgtggtctcagtaccccca aaactgcgttcaacccggctgcgtccagggtctctagttcccccactggagactgagaag gtgcctcgcaaacgagccggggctccaattggtggaggccctgggctggcaaagcggggc cgcctacagcccccaagtcccctagggcctgagggttcagtggaggaatctgaggctgaa gcctctggtgaggaggaagaaggggatgggaccccacgccgccggcctggcccccgcagg ctcgttgggaccaccaaccaaggggaccagcgcatcctgcgcagcagtgcccctcccctc ttggctggccctactgttagtcacagaggccgcaaggccaagacgtga

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