Oryctolagus cuniculus (rabbit): 100355989
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Entry
100355989 CDS
T03373
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100355989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100355989
Transcription factors [BR:
ocu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100355989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
100355989
NCBI-ProteinID:
XP_051692416
LinkDB
All DBs
Position
Unknown
AA seq
2518 aa
AA seq
DB search
MKPMKKACAGLAGPGSGSKSPPATRAKALRRRGAGEGDKPEEEDDEAQQQQQQPPPGPGE
AEEGEEEEAERGPGAEGPAPELHPGDPAPGPSEDPKGDGEAGRWEPSLSRKTATFKSRAP
KKKYVEEHGAGSSGGAGAPEERVRTPEEAGGLAVPPRPPTSARSSSTDTASEHSADLEDE
PAEACGPGPWPPSGTNGGYDLRQLRSQRVLARRSDGLFLPAVVRQVRRSQDLGVQFPGDR
ALTFYEGVPGGGVDVVLDATPPPGALAVGTAVCTCVEPGVAAYREGVVVEVASKPAAYKV
LLSPGPSSQPGPPGALAQPPQPLPREPEEAVWVARSSLRLLRPPWEPEALLRKPHSGPED
EQAEPGAPLPPCPAGLDPKQPEDAEVSKISFGSSLGAPCEEGEEKHPPALGTPALHPLPP
PQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAAQ
QKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADS
GPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECE
AAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAV
RSRHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTEL
LPHPGALGAPGTGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQ
PSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGAAGEARAGG
PGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAF
HPSPAALLPVLVPSSYTGHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQP
DPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPG
PPHTLGVVEPGKGPPPTTEEEASGPPGEPRLDSETESDHDDAFLSIMSPEMQLPLPPGKR
RTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRT
VSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLA
GGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSADTKAAGNSSCGPERLHAGGGPGS
ARPRAFSHSGVHGLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPGEGGA
LAASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKE
RVTDSESGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPTLDSEPPGPPDPPAAFGKGYC
PTPSSSCSSSAASSTSAAASFPLGSGTFKAQESGPGSTAGPLRPPPPGAGGPTTPSKATR
FLPTDPATFRRKRPESVGGLEPPGPSVIAAPPSGGGGILQTLVLPPNKEEREGSGARVPS
APTPSLGYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPAAGRAEASPNDTAGART
EMGTGSRVPGGSPLGVSLVYSDKKSTAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPG
YGAPAPPAVQFIAQGAPGSGTTSGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYIL
PTLPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPIL
QSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSVSVRGGGAGQPLPLVSPPF
SVPVQNGAQTPSKIIQLTPVSVSTPSGLGPPLSPATLPGPTSQPQKVLLPSSTRITYVQS
AGGHALPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQ
VGVSPVPSPQLPPACTAPGGPVITAFYPGSPAPSSSAPLAQPSQAPPSLVYTVATSTTPP
AATILPKGPPAPATATPAPTSPFPSATGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVG
SFEAGASGRPGPATRQPLEPGPVREPTVLESELEGQPTPPAPPPPPETWTPTARSSPPPP
PPAEERPSTKGPETVASKFPSSSSDWRIPGPGLESRGEPPTPPSPAPAPAATSGSSSEGS
SGRVAGDTPERKEAASAGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEV
LPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSA
KCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQAT
AAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPVPPPAGSAAAPAPT
PSPAGGPDPTSPGSDSGTAQAAPPLPPPPEPGPGQPGWEGASQTSPPPPGPSTAATGR
NT seq
7557 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcgtgcgcaggccttgcaggtcccggcagcggcagcaagtcc
ccaccagccaccagggccaaggctctgaggcggcgcggggctggggagggtgacaagcca
gaagaggaagacgacgaggcgcagcagcagcagcagcagccgccgccggggccaggagag
gctgaggagggtgaagaggaggaggccgagcggggccctggggctgagggaccggcccca
gagctgcaccctggggacccggccccaggtccatctgaggaccccaaaggggacggggag
gccggccgctgggagccctcactcagccgtaagacggctacgttcaagtctcgcgcgccc
aagaagaagtacgtggaggagcatggggctggcagcagtgggggcgccggggcccctgaa
gagcgggtgcggacccccgaggaggccggcggcctggctgtgcccccgcggccgcccacc
tctgcccgctcctcctctactgacacagccagcgagcactccgcggacctggaggacgag
ccagctgaggcttgtggtccaggcccctggccccccagtggcaccaacggcggctatgac
ctgcggcagctgcggtcccagcgggtgctggcccggcggagcgatggcctcttcctgccg
gctgttgtgcgccaggtgcgccgaagccaggacctgggcgtgcagttccctggcgaccgg
gccctgactttctacgagggtgtgccaggcgggggtgtggatgtggttctggatgccacg
ccgccaccgggtgcgctggcagtgggcactgccgtctgtacgtgcgtggagcctggcgtg
gctgcctaccgtgagggtgtggtggtggaggtggcctccaagccagcggcctacaaggtc
ctcctcagccctggccccagctcccagccgggcccaccgggcgccctagcacagcccccc
cagccgctgccccgggagcccgaggaggctgtgtgggtggcccgctccagcctgcgcctg
ttgcgcccaccctgggagcctgaggctctgctgaggaagccccactccggccccgaggac
gagcaggccgagccgggggcccccctgcctccctgccctgctgggctggaccccaagcag
cccgaggatgctgaagtctctaagatcagctttggcagcagcctgggggctccctgtgag
gaaggtgaggagaagcacccgccggccctgggcaccccggccctgcacccactgcccccg
ccccagctcctgtcaccgccacccaagtctccagccttcgcgggccccgggcgccctggc
gagcagccctcaccttgccaggaggggagccagggcggcagccggagcagcagcgtggcc
tccctggagaagggggccgcgccggccgcccgggcccgcacaccgctgacagccgcccag
cagaagtacaagaagggcgacgtggtctgtacccccaacgggatccggaagaagttcaac
ggcaagcagtggcggcggctgtgctcacgagacggctgcatgaaggagtcccagcggcgg
ggctactgctcgcgccacctgtccatgcgaaccaaggagatggagggcctggcggacagc
gggccaggcggggccgggcggccggctggcgtggcagcccgtgagggcagcaccgagttc
gactggggtgacgagacatctcgggacagcgaggccagcagcgtggcagcccgcggggac
tcacgtccacgcctggtggcccccgctgacttgtcgcgctttgagttcgacgagtgcgag
gcggccgtgatgctggtgtctttgggcagctcgcgctccggcaccccctccttctcgccc
gtctctacgcagtcacccttctcgccggccccgtcaccctcgccctcgcccctcttcggc
ttccgcccggccaacttcagccccatcaatgcctcaccagtcatccagcgcaccgccgtc
cgcagtcgccacctgagtgccagcaccccgaaggcaggcgtgctgacgccaccagacctg
ggccctcacccgccaccacctgccccccgagagcggcactcctctggcatcctacccacc
ttccagaccaacctgacctttaccgtgcccatcagccccgggcggcggaagacagagctg
ctgcctcacccaggggcgttgggggcccctggcacagggggtggaggcgccgcccccgat
ttccccaagagtgacagtctagactctggtgtggactcggtgtctcacacccctacacct
tccaccccggctggcttccgagctgtgtcgcctgctgtgcccttctctcgctcccgccag
ccctcgccgttgctgctgttgcccccacctgccggcctgacctcggatccggggccctcc
gtgcgcagggtgcctgctgtgcagcgggactcacctgtcattgtccgcaaccccgatgtg
ccgctgccctccaaattcccaggggaggtgggcgctgccggtgaggcacgggccggggga
cctgggcggggctgccgcgagaccccagtgccccccggggtggccagtgggaagcctggc
ctgcccccacctctgccggcccccgtgcccatcaccgtgcctccagccgcgccgactgcc
gtggcccagccgatgcccacctttggcctggcctcttcacccttccagcccgtggccttc
cacccctcacctgccgccctgttgcccgtcctggtgcccagcagttataccggccatcct
gcccccaagaaggaagtcatcatgggccggcctggaacagtgtggacgaatgtggagccc
cgctctgtggccgtgttcccttggcactccttagtacccttcctggcacccagccagcct
gacccctctgtgcagccgagtgaagcccagcaacctgccagccatccagtagcctccaac
cagagcaaagaacctgctgagtcggcagctgttgctcatgagcagccaccgggtgggaca
ggaaatgctgaccctgggcggccccctggagccacatgccctgagagcccagggcctgga
cccccgcacactttgggggtggtggaacctggcaagggtcctcctcctaccactgaggag
gaggcctctggcccgcctggagagccccggctggacagcgagacagaaagtgaccatgat
gacgcgttcctctccatcatgtctcctgagatgcagttgcctctgccccctggaaagcgt
cggacccagtcactcagcgccctgcccaaggagcgggactcgtcctccgagaaggacgga
cgcagccccaacaagcgagagaaggaccatatccgacggcccatgaatgccttcatgatc
ttcagcaagcggcaccgggccctggtccaccagcgccaccctaaccaggacaaccggacc
gtcagcaagatcctgggcgagtggtggtacgctctggggcccaaggagaagcagaagtat
catgatctggccttccaggtgaaggaagcccacttcaaggcccacccagattggaagtgg
tgcaacaaggaccgaaagaagtccagctcggaggccaagcccacgagtctggggctggca
ggagggcacaaggagacgcgggagcggagcatgtcggagacgggcactgccgctgcccct
ggggtgtcctctgagctcctgtccgtcgcagcccagacgctcctgagcgcggacaccaag
gctgcaggcaacagctcgtgtgggccagaacggctgcatgctggcgggggacctggctcg
gcccggccccgagcattctcccacagtggggtgcatggcctggatggtggggaagtagac
agccaggcactgcaggaactgactcagatggtgtcaggtcctgcatcatactctggcccg
aagccttccactcagtatggagctccaggcccctttgcagcccctggggaaggaggtgcg
ttggcggccagtggacgccctccactgctacccacccgcgcttctcgttcccagcgcgca
gccagtgaggacatgaccagtgacgaggaacgcatggtcatttgcgaggaggaaggggat
gatgatgtcattgctgacgatggctttggcaccactgacattgatctcaagtgcaaggag
cgggtgaccgacagtgagagtggagacagctctggggaagacccagagggcaacaagggc
tttggtcggaaggtgttctcacctgtgatccgttcctcctttacccactgccgtcccaca
ctggactctgagccccctgggcccccggatccacctgcagccttcggcaaaggctactgt
cccaccccgtcctcctcttgctcctcttcggctgcctcctcaacctcagcggctgcctcc
ttcccactgggctcaggaaccttcaaggcacaggaatctggtccgggcagcacagcaggc
ccactccggcctccaccccctggggctgggggcccaacaactccttccaaggccacccgg
ttcctcccgacggatcctgccacttttcgacggaagagacctgaaagtgtggggggcctg
gagccaccaggtccctcagtcattgcagcgcctcccagtgggggagggggcatcctacag
acactggtcctacccccaaacaaggaagagcgggagggcagtggagcccgcgtgccctca
gccccaaccccatcactgggttatggggccccagcagcccctctgtcccgccctgctgcc
accatggtcaccaatgtggtgcggccggtcagtagcacgcctgtgcccatcgcctctaag
cccttccccgctgctggcagggccgaggcatctccaaatgacacagcaggtgccagaact
gaaatgggcacagggtcccgggtgcctgggggctccccgctaggtgtcagcctagtgtat
tcagacaaaaagtcaacagcagccacctcaccagccccacacttggtggctggaccccta
ctgggcactgtggggaaggcacctgctactgtcaccaacctgctggtgggtactccaggc
tatggggccccggcacccccagctgtccagttcattgcccagggggcccctggcagtggg
accacttcgggctcaggagcaggtgctgggagtggccctaatgggccagttcccctgggc
atcctgcaaccaggtgccctgggcaaggctggaggtatcacccaggtgcagtacatcctg
cccacgctgccccagcagcttcaagtggcacctgccccagcaccagcccctgggaccaag
gcagcggctcccagcggccctgcgcccaccaccagcatccgtttcaccctcccgccgggc
acctccaccaacggcaaggtcctggccgccactgcacccactcctggcatccctatcctg
cagtctgtaccctccgccccaccccccaaagcccagtcagtttctcccgtgcaggccccg
cccccaggtggctcagcccagctgctacctgggaaggtactagtgcccctggccgcccct
agcgtgtcagtgcggggcggaggggctggccagccactgcccctggtgagcccgcccttt
tcagtccctgtgcagaacggcgcccagacgcccagcaagatcatccagctaaccccagtg
tctgtgagcacacccagcggcctggggccgcccctgagcccagccacgcttcccgggccc
acctcacagccccagaaggttctgctgccctcttccacaagaatcacctacgtgcagtca
gcgggtgggcacgcgctgcccctgggcaccagccccgcatccagtcaggctggaacagtc
acctcgtacgggcccacgagctccgtagctctaggcttcacctcgctggggcccagcggc
cctgcttttgtgcagcccctgctctcagcaggccaagccccactgctggctcctggccag
gtgggcgtgtcgcctgtgcccagcccccagctgcctcctgcctgcacagcccctggaggt
cctgtcataacggcattttaccctggcagccctgcaccctcctcctcagcacccctggcc
cagccatcccaggcccccccaagcctggtctacactgtggccaccagcaccaccccgcca
gctgccaccattctgcccaagggcccaccagctcctgccactgccacccctgctcccaca
agtccgttccctagtgccacaggttccatgacctacagtttagtggcccccaaggcccag
cggcccagcccaaaggccccccagaaagtgaaggccgccatcgccagcattcccgtgggc
tcctttgaggcaggtgcctccgggcggcctggccctgcaacccggcagcctctggaacct
ggcccagtccgtgagccaactgttctagagtctgagcttgaggggcagcccaccccaccg
gcccctccaccacccccagagacctggactcccacagcccggagcagccccccgccaccc
ccacctgctgaggaacggcccagcaccaagggccctgagaccgtggccagcaaattcccc
agctcatcttcagactggcgcatccctgggccaggcctggagagtcgtggggagcctccc
accccgcccagtccagccccagctccagctgcaacctctgggagcagcagtgagggaagc
agcgggagggtggccggggacacccctgagcggaaggaggcggccagtgctggcaagaag
gtgaaggtgcggcccccgcccctgaagaagacctttgactccgtggacaacagggtcctg
tcggaggtggacttcgaagagcgctttgcggagcttccggagtttcggcctgaggaggtg
ctgccctcgcccaccctgcagtccctggccacctcacccagggccatcctgggctcttac
cgcaagaagaggaagaactctacggacctggactcggcacctgaggaccccacctcaccc
aagcgcaagatgagaagacgctctagctgcagctcggagcccaacacccccaagagtgcc
aagtgcgagggggacatcttcaccttcgaccggacaggtacagaagccgaggatgtgctc
ggggagctggagtacgagaaggtgccgtactcgtccctgcggcgcaccctggaccagcgc
cgggccctggtcatgcagctcttccaggaccatggcttcttcccatcagcccaggccaca
gcagctttccaggcccgctacgcagacatcttcccctccaaggtttgtctgcagctgaag
atccgtgaggtgcgccagaagatcatgcaggcagccacgcccacggagcagcctccaggg
gcggaggcccctctccctgtaccaccccctgcgggcagtgctgctgcccctgcccccact
cccagcccagctgggggccctgaccccacctcccctggctcggactctggcacagcccag
gctgccccgccactgcctccacccccagagccgggccctggacagcctggctgggagggg
gcctcccagacctctccccctcccccaggcccctccacagctgccacaggcaggtga
DBGET
integrated database retrieval system
