Oryctolagus cuniculus (rabbit): 100355997
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Entry
100355997 CDS
T03373
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X3
KO
K10858
DNA mismatch repair protein PMS2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03430
Mismatch repair
ocu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100355997
03460 Fanconi anemia pathway
100355997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100355997
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100355997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
Ribo_biogen_C
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
100355997
NCBI-ProteinID:
XP_017194571
Ensembl:
ENSOCUG00000012590
UniProt:
A0A5F9C253
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MWGGRRKLRRLNDVTISTCHSSAKVGTRLVFDHSGKILQKTPCPRPRGTTVSVQQLFYPL
PVRHKEFQRNIKKEYAKMVQVLHAYCIISTGIRVSCTNQLGQGKRQPVVCTSGSSSIKEN
IGCVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSEALHNLFYISGFISQCTHGVGRSSTD
RQFFFINRRPCDPAKVSRLVNEVYHMYNRHQHPFVVLNISVDSECVDINVTPDKRQILLQ
EEKLLLAILKTSLIGMFDSDVNKVNVSQQPLLDVEGNLIKVHTAETETPLPGKQGSPALL
GAPGGEQRRAVSVSRLREAFSLRHTAENKAQGPKTPALSPRCRPRETGVPPPSASGPSPG
PGRGWPGPRAEAVSPIKGPGDHKGLAGTEEDPGPSSAPASSGEGLCALDCAVNSPEDGPP
REHVSPCEGETESNGNCREQCERAQVPPAPAELSSPSAKRRKKDGAPSGPDLPRGPASQL
DVAVKVPKRVVPLDFSMSSLAERVRRLLHREEPGGGEQNYRRFRAKICPGDNQAAEEELR
KEISKAMFAEMEIIGQFNLGFIITKLHEDLFIVDQHATDEKYNFEMLQRHTVLQGQRLIA
PQALNLTAVNEAILLENLEIFRKNGFDFVIDEAAPVTQRAKLVSLPTSKNWTFGPQDIDE
LIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNPSEMKQLVTHMGEMDHPWNCPH
GRPTLRHIANLAVLSQK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtggaagaaggaaacttcgaaggcttaatgacgtgaccatctccacctgccac
tcgtctgccaaggtcggcacccggctggtgtttgatcacagcgggaaaatcctccagaaa
acaccctgcccgcgccccagagggaccacggtcagcgtgcagcagttgttttacccgctg
cctgtgcgccacaaggagttccagaggaacatcaagaaggagtatgccaaaatggtccag
gtcttgcatgcttactgtatcatttcaacgggcatccgtgtgagttgcaccaaccagctc
ggacaaggcaagcgccagcctgtggtgtgcacaagtgggagctccagcataaaggaaaac
atcggatgtgtgtttgggcagaagcagctgcagagcctcatcccctttgttcagctgccc
cccagcgactctgtctgtgaagagtacggtctgagctgctcggaagcgctgcacaatctc
ttctatatttcaggtttcatctcacagtgcacccatggtgttggaaggagttcaaccgac
agacagtttttcttcatcaatcggcggccttgtgacccagcaaaggtctccaggctcgtg
aacgaggtctaccacatgtataatcggcaccagcacccgtttgtcgttctgaacatttct
gtcgattcagaatgtgtggacatcaacgtgactccagataaaagacagattttactgcag
gaggagaagctcttgctggcaattttaaagacctctctgattggaatgtttgacagtgac
gtgaacaaagtgaacgtcagccagcagccgctgctggatgttgaaggtaacttaataaaa
gtgcacacagcggaaacggagactcctctgcccgggaagcagggtagccctgccttgctg
ggggctccaggaggggagcagagaagggcagtatctgtttcccgactgagagaggccttc
tcccttcgccacacagcagagaacaaggctcagggcccaaagactccggccctgagtccc
agatgcaggccgcgggagacgggagtgccaccgcctagcgcctcaggccccagccctggc
cccggcagaggctggccgggccctcgggcggaggctgtgagtcccatcaagggccccgga
gaccacaaaggcctggcgggcacagaggaggaccctgggcccagcagcgccccagccagc
tcaggggaagggctctgcgccctggactgtgcagtgaactccccggaagacgggcccccg
cgggaacacgtgtcgccctgcgagggtgagacagaatccaacgggaactgccgcgagcag
tgtgaacgcgctcaagttccgcctgcacctgctgagctctcatccccgagcgccaagcgt
cggaagaaggatggcgctccctccggcccggaccttccccgcgggccggcgtctcagctt
gatgtggctgtgaaagtccctaagagagtggtgcccctcgacttctccatgagttcttta
gccgaacgggtgaggcgtctgcttcaccgagaagagccaggtggaggcgagcagaactac
aggaggttccgggcgaagatctgccctggggacaaccaggcggccgaggaggagctgagg
aaggagatcagtaaagcgatgtttgcagagatggagatcattggccagttcaacttgggg
tttataatcaccaaactgcacgaggatctcttcatagtggaccagcacgccacggacgag
aagtacaacttcgagatgctgcagcggcacaccgtcctgcagggccagcggctcatagcg
cctcaggctctcaacctgaccgctgtgaatgaagccattctgctagagaacctggagata
ttcaggaagaatggctttgacttcgtcatcgatgaagctgctccagtcacgcaaagggct
aagctggtctccttgccgaccagtaaaaactggaccttcgggccccaggacatagacgag
ctcatcttcatgctcagcgacagccctggggtcatgtgccggccctcgcgcgtccgccag
atgtttgcctccagagcctgccggaagtccgtgatgattggcaccgccctgaaccccagc
gagatgaagcagcttgtcacccacatgggggagatggaccacccctggaactgtccccac
ggaaggcccaccctgcggcacatcgccaatctggctgtcctttctcagaagtga
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