KEGG   Oryctolagus cuniculus (rabbit): 100356010
Entry
100356010         CDS       T03373                                 
Name
(RefSeq) DNA polymerase delta subunit 4
  KO
K03505  DNA polymerase delta subunit 4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03410  Base excision repair
ocu03420  Nucleotide excision repair
ocu03430  Mismatch repair
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100356010
   03410 Base excision repair
    100356010
   03420 Nucleotide excision repair
    100356010
   03430 Mismatch repair
    100356010
   03440 Homologous recombination
    100356010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100356010
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100356010
DNA replication proteins [BR:ocu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    100356010
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      100356010
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     100356010
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 100356010
NCBI-ProteinID: XP_002709283
LinkDB
Position
1:complement(208521422..208522913)
AA seq 107 aa
MGRKQLITDSYPVVKRGEGPAGHCKGELARELGEEPRPPGGEEAVLELLRQFDLAWQYGP
CTGITRLQRWHRAEQMGLEPPPEVLQLLKAHPGDPRFQYSLWHFYPL
NT seq 324 nt   +upstreamnt  +downstreamnt
atgggccggaagcagctcatcactgactcctaccctgttgtgaagcggggggaggggcct
gccgggcactgcaagggggagctggcacgagagctaggggaggagccccggccccccggc
ggggaggaagccgtgctggagctgctgcggcagtttgacctggcctggcagtacgggccc
tgcacagggatcacccgtctgcagcgctggcaccgggcagagcagatgggcttggagccg
ccaccagaggtgctccagctgctgaaggcccacccaggagacccccgcttccagtacagc
ctctggcacttctaccccctctga

KEGG   Oryctolagus cuniculus (rabbit): 100357626
Entry
100357626         CDS       T03373                                 
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X2
  KO
K03504  DNA polymerase delta subunit 3
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03410  Base excision repair
ocu03420  Nucleotide excision repair
ocu03430  Mismatch repair
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100357626
   03410 Base excision repair
    100357626
   03420 Nucleotide excision repair
    100357626
   03430 Mismatch repair
    100357626
   03440 Homologous recombination
    100357626
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocu01009]
    100357626
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100357626
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100357626
Protein phosphatases and associated proteins [BR:ocu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100357626
DNA replication proteins [BR:ocu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    100357626
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      100357626
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     100357626
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 100357626
NCBI-ProteinID: XP_002708741
Ensembl: ENSOCUG00000002523
UniProt: G1SHR4
LinkDB
Position
1:complement(155865310..155925043)
AA seq 465 aa
MADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVT
YLVSGSLIQNGHSCHKVAVVREDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYD
ILKSNLQNCSKFSAIQCAAAVPRAPAESSSSKKFEQSNLQVPSETQVNNEPTTNGHGPPA
SKQVSQQPKGIMGMFAAKAATKTQDANKETKTEAKDVTNASSAGTKASGKGNVMSNFFGK
AAMNKLKVNLDSEQAVKEEKIVEQPPVSVTELKLAAPAGLKKSSRKAELVRMQQKEKKRG
KRVDLSDDETKETENMKKKRRRIKLPDSDSSEDEVCPDSPGAYEAESLSPPPPGSPPPES
VPKTDPELPPIKSSTGENRRKRKRVLKSKTFLDAEGCMVTEKVYESESCTDSEEELTMKT
ASVHRPPAMTVKKEPKEERKGPKKGTAALGKANRQVSITGFFQRK
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggcggaccagctgtatctggaaaatatagacgagttcgtcacggaccagaacaagatt
gtgacgtacaaatggctgagctatacactaggggttcatgttaaccaggccaaacagatg
ctgtatgattacgttgaaaggaagcgaaaggaaaattcaggagcccagctgcacgtcacc
tacttggtatccggcagtctcatacagaatggacattcttgccacaaggttgcagtagtg
agagaagacaaattagaagcagtgaaatccaagctagctgtgactgccagcatccatgtg
tacagcatccagaaagccatgctaaaggacagtgggcctctgttcaatactgactatgac
atccttaaaagcaacttgcagaactgcagcaagtttagtgccatacagtgtgcagctgct
gttcctagagctcctgcagaatcctcatcctccaaaaagtttgagcagtcaaatcttcaa
gtaccaagtgagacacaagtgaataatgagcctactaccaatggtcatggcccacctgcc
tccaagcaggtttcccagcagccgaaaggaattatgggaatgttcgctgctaaggctgct
actaaaacccaagatgccaacaaagaaacaaaaacagaggctaaagacgtaacaaatgca
tcctcggcaggcaccaaggcatctgggaaagggaatgtgatgagcaacttttttggaaaa
gctgcaatgaataaacttaaagtcaatttggattcagaacaagcagtgaaagaagaaaaa
atagtggagcaacctccagtgtctgtcactgaactgaagctggcagctcctgcaggcctg
aagaaatccagcagaaaagcagagcttgttaggatgcagcagaaagagaaaaaaaggggg
aagcgagtagatttatctgatgatgagacaaaggaaactgaaaacatgaagaaaaagagg
agaagaatcaaacttcctgactctgatagcagtgaagatgaagtctgcccagactctcct
ggggcttatgaagctgagtcactgtccccacctccacctgggtctccacctcctgagtca
gtgccgaagactgaccccgagcttcctcctatcaagagctcaactggagaaaacagaaga
aaacgaaagcgtgtattgaaatctaaaacctttttggatgcggaaggctgcatggtgact
gaaaaagtctacgagagtgaatcctgcacagatagtgaagaggagcttacgatgaagaca
gcctctgtacacaggccccctgccatgactgtgaaaaaagaacccaaagaggaacgaaaa
ggccccaagaaagggactgctgctctgggcaaagccaacaggcaagtgtccatcactggc
ttcttccagaggaaataa

KEGG   Oryctolagus cuniculus (rabbit): 100358263
Entry
100358263         CDS       T03373                                 
Name
(RefSeq) DNA polymerase delta subunit 2
  KO
K02328  DNA polymerase delta subunit 2
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03410  Base excision repair
ocu03420  Nucleotide excision repair
ocu03430  Mismatch repair
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100358263
   03410 Base excision repair
    100358263
   03420 Nucleotide excision repair
    100358263
   03430 Mismatch repair
    100358263
   03440 Homologous recombination
    100358263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100358263
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100358263
DNA replication proteins [BR:ocu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    100358263
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      100358263
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     100358263
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-GeneID: 100358263
NCBI-ProteinID: XP_051708996
Ensembl: ENSOCUG00000014942
LinkDB
Position
10:complement(41653576..41659526)
AA seq 469 aa
MFSEQAAQRAHTLLSPPSANNATFARVPVATYTNASQPFRLGERNFNRQYAHIYATRLSQ
MRPFLVSRARQRWGSGTEVKKLCELQSGEQCCVVGTLFKAMPLQPSILREISEEHNLLPQ
PPRSKYIHPDDQLVLEDELQRIKLKGTIDVSKLVTGTVLAVLGSVKDDGKFLVEDHCFAD
LAPQKPAPPLDTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSR
VILAGNLLSHSTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFD
PTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMED
HLAILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSFGSKVIRGPED
QTVLLVAVPDFSATQTACLVNLRSLACEPISFAGFGAEDDDLGGLGLGP
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgttttccgagcaggccgcccagcgtgcccacacgctgctgtcccctccgtccgccaac
aacgccaccttcgcccgggtgcccgtggccacctacaccaacgcgtcgcagcctttccgc
ctgggcgagcgcaacttcaaccggcagtacgcgcacatttacgccacgcgcctcagccag
atgagacccttcctggtgagccgggcccggcagcgctggggcagtggcaccgaggtgaag
aagctgtgtgagctgcagtccggagagcagtgctgcgtggtgggcactctgttcaaggcc
atgcccctgcagccctccatcctgcgcgagatcagcgaggagcacaacctgctcccgcag
ccgcctcggagcaagtacatccaccccgatgaccagctggtcttggaggacgaattgcag
cgaatcaaactgaagggcaccattgacgtgtcaaagctggtcacagggacggtcctggcg
gtgctgggctccgtgaaggacgatggcaagtttctggtggaggaccactgctttgccgac
ctggctccacagaagcccgcgccaccccttgacacggacaggttcgtgctgctggtgtcg
gggctgggcctgggtggaggcggtggagagagcctgctgggcacccagctgctggtggac
gtggtgaccgggcagcttggggacgagggggagcagtgcagcgccgcccatgtctccagg
gtcatcctggccggcaacctgctcagccacagcacgcagagcagagattccatcaataag
gccaaatacctcaccaagaaaacccaggcagccagcgtggaggccgtgaagatgctggac
gagatcctcctgcagctgagcgcctccgtgcccgtggacgtgatgccaggcgagtttgac
ccgaccaactacacgctcccgcaacagcctctgcacccctgcatgttcccactggccacc
gcctactccacgctgcagctggtcaccaacccctaccaggccaccatcgacggagtcaga
ttcctggggacgtcgggacagaatgtgagtgacattttccggtacagcagcatggaggac
cacttggcgatcttggagtggaccctgcgggtccgtcacatcagccccacagcccctgac
accctaggttgttaccccttctacaaaaccgacccgttcatcttcccggagtgcccgcac
gtctacttctgtggcaacactcccagtttcggctccaaagtcatccggggccccgaggac
cagacggtgctactggtggctgtgcccgacttcagtgccacgcagaccgcctgcctggtg
aacttgcgtagtctggcctgcgagcccatcagctttgcgggcttcggggcggaggacgac
gacctgggcggcctggggctgggcccctga

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