Oryctolagus cuniculus (rabbit): 100356036
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Entry
100356036 CDS
T03373
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100356036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100356036
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100356036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Collagen
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
100356036
NCBI-ProteinID:
XP_002712246
Ensembl:
ENSOCUG00000011375
UniProt:
G1T170
LinkDB
All DBs
Position
7:113923781..114040666
Genome browser
AA seq
1336 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDEANEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSAGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMSMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHMGPQ
GPPGPQGHLGPQGPPGTPGMQGPPGPRGMQGPPHPHGMQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPREGQGPAPQGMMMGHPPQELRGPHPPSGLLGHGPQEMRGPQEMRGMPGPP
PQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTPLLGDGPRAPFNQEGQSAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGSMAERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRSAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPPRHEGRAPPRGRDGFPGPEDFGPEESFDVA
EEAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHRDMEAPGGPSEDRGGK
GRGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGVRSSSTWGRGSNMN
SGPPRRGSSRGGGRGR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggttctcctcctcgttttttccatatgccaaggttccagcaccaa
gcacctcgacaactgttttataagcgacctgattttgcacagcagcaagcaatgcaacaa
cttacctttgatggaaaacgaatgagaaaagctgtaaaccgaaaaaccatagactacaac
ccttctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggctattataatgatctggtcccccctataggaatgttgaat
aatcctatgaatgctgtaaccacaaaatttgttcggacatcaacaaataaagtaaagtgt
ccagtatttgttgtaaggtggactccagaaggaagacgattggtcactggagcttccagt
ggagagttcaccttgtggaacggactcactttcaactttgaaacaatattacaggctcat
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgctgacagcagac
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgctgatgtgaaatgtgtagactggcatccaaccaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacaccgtaatggaagtgaagttaaatctcaatggg
aattggctgctcacagcatcacgtgaccatctctgtaagctttttgacatccgaaacctg
aaagaagagcttcaagtcttccggggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgagggactttttgccagtggagggtctgacggttctttgttattctggcat
gttggggttgagaaggaagtgggtgggatggagatggcccacgaaggaatgatctggagt
ctggcttggcaccctcttggacatattctctgctcaggttcaaatgaccacaccagcaaa
ttctggactcgaaatcgaccaggtgataaaatgcgagatcgatataatctgaacctgtta
cctgggatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggccgta
attccagggatgggaataccagaacaactaaaattagctatggaacaagaacagatgggg
aaagatgaagcaaatgaaatcgaaatgacaattcctggtttagattggggaatggaggaa
gtgatgcaaaaggatcagaaaaaagtacctcagaagaaagttccttatgcaaaacctatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgctccaaatgag
gtgctgaatgacagaaaagaggacattaaattggaagagaagaaaaaaacacaagcagaa
attgagcaagaaatggccacattacagtataccaacccacaacttctggagcaactcaaa
attgaaagactggcacagaagcaggctgagcaaatccagcctcctccctcagctggcact
cctctcctcggaccccagcccttccctggacaaggtccaatgtcgcagattcctcaaggt
tttcaacaacctcacccatctcagcagatgccaatgagcatggctcagatgggacctcca
ggtccacaaggacagtttagaccccctggaccccaggggcaaatgggaccacaaggccct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccgcctcaggggctgccacggcctcaggacatgcacgggccccaaggaatgcagaggcat
cctggacctcatggccctttggggcctcaaggaccacctggaccacagggtagttctggt
cctcaaggtcatatgggtccccagggtccacctggcccccagggtcacatgggcccccaa
ggtccacctggtccccagggtcacttgggcccccaggggcctcctggtacgccaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcatcctcatggaatgcaaggc
gggcctgggtctcaagggatccaaggccctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcaaggccctcctggcccccgggagggtcagggtcctgctccccaaggc
atgatgatgggtcacccgcctcaagaactgagaggacctcaccctccgagcggactcctt
ggccatggccctcaggaaatgagaggtcctcaggagatgcggggcatgcccgggccgcca
ccccaaggatcgatgctgggccctccccaggaactgcgcgggccaccaggctcacaaggc
cagcaggggccgccccagggctctttgggacctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccagcaagagggccacatccgtctcaagggccaata
ccattccagcaacagaaaacacctctgctaggcgatgggccccgggcgcccttcaatcag
gaaggacagagcgcaggccccccacccctgatcccaggcctagggcagcagggagcacaa
ggccgcatcccccctctgaaccccggacaaggacctggccctaacaaaggtgactcccgc
ggccccccaaaccatcacatgggctcgatggcagagaggcggcatgagcagagcggcggc
cctgagcacgggcctgagagggggcctttccggggcggccaggactgcaggggtccccct
gataggcgcggccctcaccccgacttccccgatgacttcagcagaccagacgactttcac
cccgacaagcgctttggccaccgattacgtgaatttgagggtcgaggaggacctttacca
caagaagagaagtggaggcgaggggggcccgggcctccgtttcctcctgatcacagggaa
ttcagtgagggcgatggccgcagtgcagcccgaggccccccgggggcatgggaaggccgc
agacctggagatgaacgattcccccgggatcccgaggacccacgttttcgagggcgcaga
gaagaaagcttccgaagaggggcccccccgccgaggcatgagggccgtgccccccccaga
gggagggacggtttccctggtcctgaagactttgggccggaggagagttttgatgtggct
gaggaagcggcccgaggccgggatctcagaggtcgaggtcggggaaccccacgaggagga
aggaagggtttgctccccactccggacgagttcccacgctttgaaggacgaaagccagac
tcctgggatggaaaccgagagccagggcctggtcatgagcatttccgtgacgctccccgc
cctgatcatccccctcatgatggtcattccccagccagcagagaacgctcctcttctctc
caaggcatggacatggcgtccctcccgccccgaaagcgcccttggcacgatgggccaggc
acgtccgagcaccgagacatggaagccccaggaggcccttctgaagaccgaggaggcaaa
ggccgagggggcccaggaccttcccagagagtgccaaaatccggccgttccagctctttg
gacggagaccaccatgatggataccacagagacgaacctttcgggggccccccgggcagt
ggcacgccttctcgaggggtccggagtagcagtacctggggtagaggaagtaacatgaac
tctggcccaccgaggcggggctcttcccggggcggtggaaggggtcggtag
DBGET
integrated database retrieval system
