Oryctolagus cuniculus (rabbit): 100356051
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Entry
100356051 CDS
T03373
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X2
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100356051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100356051
Spliceosome [BR:
ocu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100356051
Complex C
U4/U6.U5 tri-SnRNP related factors
100356051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100356051
NCBI-ProteinID:
XP_002715139
Ensembl:
ENSOCUG00000000963
UniProt:
G1SEF5
LinkDB
All DBs
Position
13:complement(114402396..114420150)
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtactgtgaaggatgcgcatagcatccacggcaccaaccctcagtacctg
gtggagaagatcattcggacgcgaatctatgagtccaagtactggaaagaggagtgcttt
gggcttacggctgaactggtggtcgataaagccatggagttaaggtttgtgggtggtgtc
tatggtggcaacataaaaccgactccttttctgtgtttaaccttgaagatgcttcaaatt
caacctgagaaggatatcattgtagagtttatcaaaaatgaagatttcaagtatgttcgt
atgttgggggcactttacatgaggctgacaggcactgcgattgattgctacaagtacttg
gagcctttgtataatgactatcgaaaaatcaagagccagaaccgaaatggggagtttgaa
ctaatgcatgtagacgagtttattgatgaactgctgcacagtgagagagtctgtgatatc
atacttcctcggcttcagaaacgctatgtactagaggaagctgagcaactggagcctcga
gttagtgctctagaagaggacatggatgacgtggagtccagtgaagaagaggaagaggaa
gatgagaagttggaaagagtgccatcacctgatcaccgccggcgaagctaccgagactta
gacaagccccgtcgctctcctacactgcgctacaggaggagtaggagtcggtcacccaga
aggcggagtcgatctccaaaacggagaagcccatcccctcgtagagaaaggcatcgtagc
aagagccccagacgtcatcgcagcaggtctagagatcgacggcacagatcccgctccaaa
tccccaggtcatcaccgtagtcacagacacaggagccactcaaagtctcctgaaagatct
aagaaaagccacaagaagagccggagagggaatgagtaa
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integrated database retrieval system
