KEGG   Oryctolagus cuniculus (rabbit): 100356135
Entry
100356135         CDS       T03373                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100356135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100356135
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100356135
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     100356135
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4
Other DBs
NCBI-GeneID: 100356135
NCBI-ProteinID: XP_002718659
Ensembl: ENSOCUG00000011898
UniProt: G1T271
LinkDB
Position
18:complement(42554039..42562851)
AA seq 195 aa
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMREAE
SQLLPDVGSIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgccacctgtaaggtactgcatccccggcgaacgtctgtgtaacttggaggagggc
agcccaggcagcggcacctacacacggcacggatacatcttttcttccctcgccggctgt
ctaacgaagaccagcgagaacggcgcgctcccggtagtgtctgtgatgagagaagcagaa
tcccaattacttccagatgtgggctctattgtaacatgtaaggtctccagcatcaattca
cgttttgccaaagtacacatcctctacgtgggatccacacctcttaagaactcttttcga
ggaactatccggaaggaagatgttcgagccactgaaaaagacaaggttgaaatatacaag
agtttccgtccaggggacattgtcttggccaaagtgatctctctaggtgacgcccagtcc
aactacctgctgaccacagctgaaaatgagctgggagtggtggtggcccatagtgagtca
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacactaag
gagttccggaaggtggcccgcgtgcagcctgaattcttgcagacctag

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