Oryctolagus cuniculus (rabbit): 100356207
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Entry
100356207 CDS
T03373
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04120
Ubiquitin mediated proteolysis
ocu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100356207
04120 Ubiquitin mediated proteolysis
100356207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100356207
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100356207
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
U-box type E3
100356207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
100356207
NCBI-ProteinID:
XP_008264165
Ensembl:
ENSOCUG00000016997
LinkDB
All DBs
Position
13:complement(140185394..140312630)
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AA seq
1363 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRESPPGPPLAASAPGPSQSLGLNVHNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVACEKSMSQV
DVDSGIENMEVDENDRREKRSLGDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
RNLMLNAGSNPGTSPMFCSVGSFGASSLSSLYETSPTPIASFWSSVPTLGPPSASPSRAA
SQVATPSASASLSPHSTASGTALGSQPSSPRYRPYTVTHPWGGAPCPTPRSPSISVPSSS
PSLRALTSSPQAVPTSSSRQRPSSMGPPFPPASPSATRRRPSPLRTSPSVYDNPFSFLFL
ALAGDSSDEEDEEDDDDDGDDDDEGGGGGDDVSCVQFGSSLGASGGASSWDSYSDHFTIE
TCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNVRSQCISHTALVLQGSLTQP
RSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDND
YFKYPLMALGELCETKFGKTHPVCNLVASLPLWLPKPLSPGSGRELQRLSYLGAFFSFSV
FAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALG
YMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRIT
LPNDETRVNATMEDMSSWRAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRR
LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF
LRRCLNFYGLLIQLLLRVLDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYS
PQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENH
PLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNS
GKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMRNKEQWEQLPRDQQQARQSQLAQD
ERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVE
NPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTI
AIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIIL
RHLLNSPTDPFNRQPLTESMLEPVPELKEQIQAWMREKQNSDH
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagattcgtcggaggcgccttgcacgacttgctggtgga
cagacctcccagccgaccaccccgctcacctctccccagagggagagccctccaggacct
cccctagcagcatcagcccccggtccctcccagagtctaggtctcaatgtccacaacatg
accccagctacctccccaataggtgcagcaggagtagcccatcgaagccagagcagtgaa
ggagtcagttctctgagcagctcgccctccaatagccttgaaacgcaatctcaatctctc
tcacgttcccagagcatggatatcgatggtgtcgcttgtgagaaaagcatgtcccaggtg
gatgtggattcaggaattgaaaacatggaggttgatgaaaacgatcgaagagagaagagg
agcctcggtgacaaggagccttcctcgggccctgaggtgtccgaagagcaggccttacag
ctggtctgtaagatcttccgcgtctcttggaaggatcgcgacagagatgttatctttctt
tcttctctttctgcacagtttaagcagaacccaaaagaagtgttctctgattttaaggac
ttaattggccagattttaatggaagtactaatgatgtctactcagacaagagatgaaaac
ccctttgccagtctgacagccacatcccagcccattgcagcagcagctcggtcaccagac
agaaatctcatgctgaatgctggctccaacccaggaacaagccccatgttctgcagtgtg
ggctccttcggggccagctctttgtctagcctctatgaaactagccctacccccattgcc
agtttctggagctctgtgcccacgctaggtccaccctctgcctcaccctcccgggcagcc
agccaggtggccacgccttctgcctctgcttccctcagtcctcacagcacagcttctgga
actgctctaggaagccagccctcgtctccccgctatcgcccctacactgtcacccacccg
tgggggggtgccccctgtcccaccccccggtcccccagcatcagcgtcccgtcaagctcc
ccaagcctccgtgcgctcaccagtagcccccaggcagtacccactagcagttccagacag
cggcccagcagcatgggcccgcccttcccgcccgcctcgcccagtgctacacgcagacgt
ccgtcccccctgaggacctctcctagtgtgtacgacaatcccttctccttcctcttcctc
gcacttgctggggacagtagtgatgaagaagatgaagaggatgatgatgatgatggtgat
gatgatgatgaaggtggtggtggtggtgatgatgtttcttgtgtccagtttgggtccagt
ttgggagcctctggtggagcaagcagttgggattcctacagtgaccattttaccattgaa
acctgcaaagagaccgatatgctgaactacctcattgagtgttttgaccgagttggaata
gaggaaaaaaaagcaccaaagatgtgcagccagcccgcggtcagccagctcctgagcaac
gtccgctcacagtgcatctcccacactgcgctggtcctgcagggctccctcacgcagccc
aggtccctgcagcagccgtccttcctagtgccgtacatgctgtgtaggaatctcccctac
ggcttcattcaagagctggtgagaaccacgcaccaggatgaagaagtgttcaagcagatc
tttatccccattttgcaaggcctggctcttgctgccaaagagtgctccctcgataacgac
tactttaaataccccctcatggcattaggtgaactctgtgaaaccaagtttgggaagacg
caccctgtgtgcaatttggttgcctccttgccattgtggttgccgaaacccttaagccca
ggctctgggcgggagctgcagagactctcttacctgggggccttcttcagcttctctgtc
ttcgccgaggacgatgttaaagtggttgaaaagtatttctcagggcctgccattaccctg
gaaaacactcgtgttgttagccaatcactacagcattacttggagttgggaaggcaagag
cttttcaagattctgcatagtattttgttaaacggcgaaacccgtgaggccgctctgggt
tacatggcagccgtcgtcaacgccaatatgaagaaagcgcagatgcagacagatgataga
ttagtatctacagacggatttatgctgaatttcctttgggtactacagcagctaagtaca
aaaatcaagttagaaacagttgatccaacgtatatcttccacccaagatgccggattact
ctccccaatgatgagacgcgcgtgaacgccacgatggaggacatgagcagctggcgggct
gagctctacggtgatcagcctccattttctgagccgaaattccccactgagtgcttcttt
ctcaccctgcacgcccaccacctctccattcttcctagttgccgtcgctacatccgcagg
ctccgagccatcagggagctcaacagaaccgtggaagatttgaaaaataacgagagccaa
tggaaagactcgcccctggcgaccagacaccgcgagatgctgaagcgctgcaagactcag
ctcaagaaactggtgcggtgcaaggcctgtgctgacgcgggcttgctggacgagagcttc
ctgagacgttgtctgaacttctacggccttctcatccagctgctgctgcgcgtcctggac
cccgcgtaccccgacataacactgcctttaaattcagatgtccccaaggtatttgcagcg
ttgcctgagttttatgtagaagatgttgcggaatttttattttttattgtacaatactct
cctcaggtgctgtacgagccctgcactcaggacattgtgatgttcctcgtggtgatgctg
tgcaaccagaactacatccggaacccctacctggtggccaaactggtggaggtcatgttc
atgaccaacccgtccgttcaaccacgaacccagaagttttttgaaatgattgaaaaccac
cctctctccaccaaactgctggtcccttccctgatgaagttttacacagatgtggagcac
accggagccaccagcgagttctacgacaagttcacaattcgctaccacatcagcaccata
tttaaaagcctctggcaaaacatagctcaccacggcaccttcatggaggagttcaactcc
gggaagcagtttgtccgctacatcaacatgctgatcaacgacacgacgttcctgcttgat
gagagtctggagtccctgaagcggatccacgaagtgcaggaagagatgaggaacaaggag
cagtgggagcagctgccccgggaccagcagcaagcccggcagtcccagctggcccaggac
gagcgtgtgtcccgctcttaccttgccctggccaccgaaactgtggacatgttccacatc
ctcaccaagcaggtccagaagccgttcctcagacccgagctcggcccccgcctggctgcg
atgctgaacttcaatcttcagcagctctgtggccccaagtgccgcgacctgaaggttgag
aaccctgagaagtacggcttcgagccaaagaagctgctggaccaactgacggacatttac
ctacagctggactgtgcgcgattcgctaaggccattgccgacgaccagaggtcctacagc
aaagaactgttcgaggaggtgatctccaagatgcggaaggcggggatcaagtccacgatc
gccatcgagaagttcaagctcctggccgagaaggtggaggagatcgtcgccaagaacgcc
cgcgcggagatcgactacagcgacgccccggatgagttcagagaccctctgatggacacc
ctgatgactgaccccgtgaggctgccctctggcaccatcatggaccgttccatcatcctg
cggcacctgctcaactcccccaccgaccccttcaaccggcagccgctgaccgagagcatg
ctggagccagtgcccgagctgaaggagcagatccaagcgtggatgcgcgagaagcagaac
agcgaccactga
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integrated database retrieval system
