Oryctolagus cuniculus (rabbit): 100356568
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Entry
100356568 CDS
T03373
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04115
p53 signaling pathway
ocu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100356568 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100356568 (COP1)
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100356568 (COP1)
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100356568 (COP1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
100356568 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
100356568
NCBI-ProteinID:
XP_008262031
Ensembl:
ENSOCUG00000005463
LinkDB
All DBs
Position
13:complement(3444677..3654411)
Genome browser
AA seq
734 aa
AA seq
DB search
MSSSRQAGSGSAGTSPGSSAASSVTSASSSLASSPSPPAAAAAAAAALGSGGAAQAAGSG
GLGGPARPVLVAAAVSGGGGGGGAVSAGLSRLSCAARPSAGVGGSSSSLGSGSRKRPLLA
PLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV
DNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLAN
VNLMLELLAQKKKQLEAESHAAQLQILMEFLKVARRNKKEQLEQIQKELSVLEEDIKRVE
EMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYISTLASRR
KRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDL
YNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCIS
WSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAK
VKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKG
HRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIAC
GSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLI
AANSQGTIKVLELV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagccgccaggccggctccggctccgcggggacgagccccggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttagcctcttccccgtcgccccctgccgcg
gcggcggcggcggcggcggcgctggggtccggcggggccgcgcaggccgcgggctcgggc
ggcctcgggggtccggcgcggcctgtgctggtggcggccgccgtgtcgggcggcggcggc
ggcggcggggcggtgtcggcgggcctgtcccggctcagctgcgcggccaggcccagcgcc
ggcgtaggaggcagcagctccagcctcggcagcggcagcaggaagcgacccctgctcgcc
cctctctgcaacgggctcctcaactcctacgaggacaaaagcaacgacttcgtctgcccc
atctgctttgatatgattgaggaagcatacatgacaaaatgtggccacagcttttgctac
aagtgtattcatcagagtttggaggacaataacagatgtcccaagtgtaactatgttgtg
gacaatattgaccatctctatcctaatttcctggtgaatgagctcattctgaaacagaag
caaagatttgaggaaaagaggttcaaattggaccactcagtgagtagtaccaatggccac
aggtggcaaatatttcaagatttgttgggaactgaccaagataaccttgatttggccaat
gtcaacctcatgttggagttattagcacaaaaaaagaaacagttggaagcagaatcacat
gcagcccaactacagatccttatggagtttctcaaggttgcaaggaggaataagaaagag
caactggaacagatccagaaggaactgagtgttttggaagaggatattaaaagagtggaa
gaaatgagcggcttgtactctcctgtcagtgaggacagcactgtgcctcaatttgaagct
ccttctccatcacacagtagtattattgattccacagaatacagccaacctccaggtttc
agtggcagttctcagacaaagaaacagccttggtatatcagcacattagcttcaagacga
aaacgactcactgctcattttgaagacctagagcagtgttatttttctacaaggatgtct
cgtatctcagatgacagtcgaactgcaagccaactggatgaatttcaggaatgcttatcc
aagtttactcgatataattcagtacgacctttggccacgttgtcatatgctagtgatctc
tataatggctccagcatagtctctagtattgaatttgaccgggattgtgactattttgca
attgctggggttacaaagaaaattaaagtctatgaatatggcacagtcatccaggatgca
gtggacattcattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagt
tggagtagttaccataagaatctgttagctagcagtgattatgaaggcactgttatccta
tgggatggatttacaggacagaggtcaaaagtctatcaggaacatgagaagcgatgttgg
agtgttgacttcaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaa
gtgaagctgtggtctaccaatctagataactcagtggcaagcattgaggcaaaggctaat
gtatgctgtgttaaatttagcccctcttccagataccatttggctttcggctgtgcagat
cactgtgtccactactatgatcttcgtaacactaaacaaccaatcatggtattcaaagga
caccgaaaggctgtctcttacgcaaagtttgtgagtggtgaagaaattgtctctgcctca
acagatagccagctaaaactgtggaatgtagggaaaccatactgtctacgttccttcaag
ggtcatatcaatgaaaaaaactttgtaggcctcgcttccaatggagattatatcgcttgt
ggaagtgaaaacaactccctctacctgtactacaaaggactttctaagactttgctaact
tttaagtttgatacagtcaaaagtgttctggacaaagaccggaaagaagatgatacaaat
gaatttgttagcgctgtttgctggagagcattgccagatggggagtccaatgtgctgatt
gctgctaacagtcagggtacaattaaggtgctagagttggtatga
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integrated database retrieval system
