Oryctolagus cuniculus (rabbit): 100356628
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Entry
100356628 CDS
T03373
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100356628
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Major cadherins
100356628
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
TAS2R
Wzy_C
Motif
Other DBs
NCBI-GeneID:
100356628
NCBI-ProteinID:
XP_051707125
Ensembl:
ENSOCUG00000014561
LinkDB
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Position
9:complement(14310803..14552459)
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AA seq
801 aa
AA seq
DB search
MRTSGRMSNAKSWLGLGMSLYFWGLMDLMTTVLSGTPTPRGELEVLLSDKSQSHQRTKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGVIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPISSTVGRVFAKD
LDEGINAEMKYTIVDGDGADAFDINTDPNFQVGIITVKKPLSFESKKSYTLKVEGANPHL
EMRFLNLGPFQDTTTVHISVEDVDEPPVFEPGFYFVEVPEDVAIGTTIQIISAKDPDVTN
NSIRYSIDRSSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVSV
TIKVLDVNDNAPEFPRFHDAVVCENAKAGQLIQTVSAVDQDDPHNGQHFYYSLAPEAANN
PNFTVRDNQDNTAQILTRRAGFRQQEQSVFYLPILIADSGEPVLSSTGTLTIQVCSCDDD
GHVMSCSPEAYMLPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIIDDDENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGAAPKTRQDMLPEIESLSRYVPQTCAVNS
TVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLSSLQSATSDSEQSFDFLTDW
GPRFRKLAELYGAADAPAPLW
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcggacttctggtaggatgagcaatgcaaagagctggcttggactcggcatgtccttg
tacttctggggattgatggacctaatgaccaccgttctgtcaggcaccccaacacctcga
ggcgaattggaagttctcctgtcagacaagtcacagtcacatcagcgaaccaagagaagc
tgggtctggaaccagtttttcgtcttggaagagtatactggcaccgatcctttgtatgtt
ggcaagctgcattcagacatggacagaggagatggatccattaaatacatcctctcagga
gaaggcgcaggcattgtgtttaccattgatgacactactggtgacatccacgccattcag
aggctcgaccgagaggaaagagcccagtacactctaagggctcaagccctggacaggagg
acaggccggccaatggaaccagaatcagagttcatcatcaaaatccaagacatcaatgac
aatgagcccaagttcctggacggaccttatgttgccactgtgccagagatgtcaccagtg
ggtacctctgttatccaggttacagccacagatgctgatgacccgacgtatggcaacagt
gcccgggtagtgtacagcattcttcagggccagccatatttttctgtggactccaaaaca
ggtgtaattaggacagctctcatgaacatggacagagaagccaaagaatactacgaggtg
attatccaagccaaggacatgggagggcagcttggaggattagctgggaccacaacagtc
aacatcaccctctcggatgtcaatgacaacccacctcgctttccccagaaacattatcag
atgagtgtgttggagtcagctccaattagctccactgtggggagagtgtttgccaaggac
ctggatgaaggaatcaatgcagagatgaaatacactattgtggatggagatggtgctgat
gcttttgacattaacacagatcccaatttccaagtaggcatcataactgtgaagaagccc
ctgagttttgaaagcaagaaaagctacacgttaaaagtggaaggagccaatcctcaccta
gagatgcgttttctgaacctaggcccctttcaggacacaacaacagtgcacatcagcgtg
gaggatgtggatgagcccccagtgtttgaacctggcttttattttgtggaggtgcctgag
gatgtggcaattgggacgaccatacagatcatttctgccaaggacccagatgtgaccaac
aactccatcagatactccattgacagaagcagtgaccctggaagatttttctatgtcgac
attacaacaggtgccctcatgactgcaagacccctagaccgggaagaattttcttggcac
aatatcactgttcttgctatggaaatgaacaatccctcccaggtgggaagtgtttccgtc
actatcaaagtcctagatgtgaacgacaatgctccagagttcccccgattccacgacgct
gtcgtctgcgagaatgccaaggcagggcagttaatccagacagtgagtgcagtggaccaa
gatgacccgcataatggtcagcatttctactacagcttggctcctgaggctgccaacaac
cccaacttcactgtaagggataaccaagataacactgcccagattctaactcggcgagct
ggcttccggcagcaagagcagagtgtcttttacctgcccatcctgattgcagacagtggg
gagcccgtgctgagcagcacaggcacgctgaccatccaggtgtgcagctgtgacgatgat
ggccatgtcatgtcctgcagccctgaggcctacatgcttccagtcagtttgagccggggt
gccctcatcgccatcctggcctgtatctttgttctcttagtgctggtcctgctcattctg
tccatgaggcggcaccgcaagcagccctacatcatcgacgacgacgagaacatccacgag
aacatcgtccgctacgacgacgagggcggcggcgaggaggacacggaggccttcgacatc
gcggccatgtggaacccgcgggaggcgcaggcgggcgccgcccccaagacgcggcaggac
atgctgcccgagatcgagagcctctcccgctacgtgcctcagacgtgcgccgtcaacagc
accgtccacagctacgtcctggccaagctctacgaggccgacatggacctgtgggccccg
cccttcgactccctgcagacctacatgttcgagggggacggctcggtggcggggtcgctg
agctccctgcagtcggccacatcagactccgagcagagcttcgacttcctgacggactgg
gggccccgcttccggaagctggcggagctgtacggagcagcggatgcgcctgcgccgctg
tggtga
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