Oryctolagus cuniculus (rabbit): 100356932
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Entry
100356932 CDS
T03373
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100356932
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100356932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_HIF1A
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
100356932
NCBI-ProteinID:
XP_051693359
Ensembl:
ENSOCUG00000016061
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MATPYSGSGGGAEVKCGGGRGASVPWDFLPGLMVKAPAGPCLQAQRKEKSRNAARSRRGK
ENLEFFELARLLPLPGAISSQLDKAVGKGGSIGASSGVTLPPAWRRFSARGFPPWAPRLV
GPPSGSSPGRRGPVALVSQVFEQNLGGHILQSLDGFVFALNQDGKFLYISETVSIYLGLS
QVELTGSSVFDYIHPGDHSEVLEQLGLRARTPGPPTPPSVPSSSSSSSSSSSSLADTPDI
EASPTEAPRSSRAQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHT
LPPAPLPELPLHGHMIVFRLSLALTILACESRVSDHMDLGPAELVGRSCYQFVHGQDVTR
IRQSHLDLLDKGQVVTGYYRWLQRAGGFVWLQSVATVAGSGKSPGERHVLWVSHVLSQAE
DDQTPLDAFQLPATHKGAPSPEPEPTGPEPPGEEKQPAPQAKDEAPQSQRKCVKEEASPR
EAAGSEDSEEEEPPGSPAPPRPEFTSVIRAGALRQVPVRPWGLAPPEDPPPSLLHAGFLP
PPVMRGLCAPGAIRYGPAELGLVYPHLQRLGPGAPLPEAFYPTLGLPYPGPAGTRAQRKG
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccctattccggcagtggcggcggggccgaggtcaagtgcgggggcggccgt
ggcgccagcgtcccatgggactttctgcctgggctgatggtcaaggccccagctggacct
tgcctgcaggcgcagcgcaaggagaagtcccgtaacgccgcgcgctcacggcgcgggaag
gaaaacttggagttcttcgagctggccaggttgctcccgttgcccggcgccatctccagc
cagctggacaaggcggtgggaaaaggggggtccatcggggcgtcttcaggggtcacccta
cctcccgcctggcgccggttttcggcgcgggggttcccaccctgggctccccgcctggtg
gggcctccgagcggctcctccccaggccgccggggccccgtggcgctggtctcccaagtc
ttcgagcagaacctcgggggacacatcttgcagtccctggacggcttcgtgttcgccttg
aaccaggatggaaaatttctgtacatctcagagacagtctccatctacctgggtctctca
caggtggagctgacgggcagcagtgtcttcgactacatccaccccggcgaccactcggag
gtgctggagcagctggggctgcgcgcccggacccccgggccccccactccgccctccgtc
ccctcttcttcctcctcgtcgtcctcgtcttcctcctcgcttgccgatacgcccgacatc
gaggccagccccacggaggcgccccgctcctcccgggcgcaggagcgttccttcttcgtc
cgcatgaagtccactctcaccaagagagggctgcacgtcaaggcctccgggtacaaggtc
atccacgtgactgggcgcctgcgggcccgcgccctgggcctcgtggccctcggccacacg
ttgcccccggccccgctgcccgagctccccctgcacggacacatgatcgtcttccgcctc
agcctggccctcaccatccttgcttgtgagagcagagtcagtgaccacatggacctcggg
cccgcagagctggtgggccgcagctgctatcagttcgtccacggccaggacgtgaccagg
atccgtcagagccacctggacctgctggacaagggccaggtggtgaccggttactaccgt
tggctgcagcgcgccgggggcttcgtgtggctgcagtcggtggccacggtggccgggagc
gggaagagccccggggagcgccacgtgctgtgggtcagccacgtgctcagccaagccgag
gatgaccaaacacccctggatgccttccagcttccggccacccacaagggcgcgcccagc
ccggagccagagcccacggggccggagccgccaggggaagagaagcagcctgcgccccaa
gccaaggacgaggccccccagtcccagcgcaaatgcgtcaaggaggaggccagccccagg
gaggcggccggctcggaggacagtgaggaggaggagccgccgggcagccccgccccgcca
cgccccgagttcacgtcagtcatccgcgcgggggccctgaggcaggtgcctgtgcggccc
tggggcctggcgccccccgaggaccccccaccttcgctcctgcacgccggcttcctgccc
ccgcccgtgatgcggggcctgtgcgcgcccggcgccatccgctacggccccgcggagctg
ggcctggtgtacccgcacctgcagaggctgggcccgggcgcccccctccccgaggccttc
taccccaccctgggcctgccctaccccgggcccgccggcaccagggcgcagcggaagggg
gactga
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