Oryctolagus cuniculus (rabbit): 100357159
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Entry
100357159 CDS
T03373
Name
(RefSeq) nuclear receptor ROR-alpha isoform X3
KO
K08532
RAR-related orphan receptor alpha
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04659
Th17 cell differentiation
ocu04710
Circadian rhythm
ocu05017
Spinocerebellar ataxia
ocu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100357159
09159 Environmental adaptation
04710 Circadian rhythm
100357159
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
100357159
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100357159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100357159
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocu03310
]
100357159
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100357159
Nuclear receptors [BR:
ocu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100357159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HisG
Motif
Other DBs
NCBI-GeneID:
100357159
NCBI-ProteinID:
XP_008267161
Ensembl:
ENSOCUG00000012900
UniProt:
G1T4B2
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All DBs
Position
17:12114084..12871283
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AA seq
468 aa
AA seq
DB search
MMYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREEL
QQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNSVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatcgcagcgatgaaagctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattatggtgtgattacgtgtgaaggctgcaagggc
tttttcaggagaagtcagcaaagcaatgccacctactcctgtcctcgtcagaagaactgt
ttgattgatcgaaccagcagaaaccgctgccaacactgtcgactccagaaatgccttgcc
gtggggatgtctcgagacgccgtaaagtttggccgaatgtcaaaaaagcagagggacagc
ttgtacgcagaggtgcagaagcaccggctgcagcagcagcagcgcgaccaccagcagcag
cccggggaggccgagccgctgacgcccacctacaacatctcggccaatgggctcacggag
cttcacgacgacctcagcaactacattgatggccacacccccgagggcagcaaggccgac
tcggcggtcagcagcttctacctggacatacagccctcccccgaccagtcgggtctggac
atcaacgggatcaaaccggaacccatatgtgactacacaccagcatcaggcttctttccc
tactgctccttcaccaatggagagacctccccgaccgtgtccatggcagaattagaacac
ctggcgcagaatatatccaagtctcatctggaaacctgccagtacttgagagaagagctc
cagcagatcacgtggcagacctttctgcaggaggagatcgagaactatcaaaacaagcag
cgggaggtgatgtggcagttgtgtgccatcaaaattacagaagctatacagtatgtggtg
gagtttgccaaacgcattgatggatttatggaactgtgtcaaaacgatcaaattgtgctt
ctgaaagcaggttctctagaggtggtcttcatcagaatgtgtcgtgcctttgactctcag
aacaactccgtgtactttgacgggaagtatgctagccccgaagtcttcaaatccttaggt
tgtgaagactttattagctttgtgtttgaatttggaaagagtttatgttctatgcacctg
actgaagatgaaattgcattattttctgcatttgtcctgatgtcggcagatcgctcatgg
ctgcaggagaaggtaaagattgaaaaactgcaacagaaaattcagctggcacttcagcat
gtcctacagaagaatcaccgagaagacggaatcttaaccaagctaatatgcaaggtgtct
acattaagagccttatgtggacgacatacagaaaagctaatggcatttaaagcaatatac
ccagacattgtgcgacttcactttcctccattatacaaggaattgttcacttcagaattt
gagccagcaatgcaaatagatgggtaa
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