Oryctolagus cuniculus (rabbit): 100357180
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Entry
100357180 CDS
T03373
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocu03037
]
100357180
04040 Ion channels [BR:
ocu04040
]
100357180
Cilium and associated proteins [BR:
ocu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100357180
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100357180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
ApoO
Motif
Other DBs
NCBI-GeneID:
100357180
NCBI-ProteinID:
XP_051709166
LinkDB
All DBs
Position
10:47081376..47182607
Genome browser
AA seq
2832 aa
AA seq
DB search
MAEALHLLGSGLGAARGGELKARHRRPPPTFRSDRQPLERAQPQVPSQAAVCSGECRRLP
LRSPQGNLPGSGTLQLDSGHVLPYPRRAVLCRGRGRRAGGAAAPWDRGGWIRERTAGAAF
PFAHVSQCPPGTVPMRGTDGALDPGLHHFLETDAQAPPVLGLRVHTASGAALCLLMAFGD
SAGIETSLYNVTKAATVTACHQEGKVLLSCLLASLSEAVHSLRALIDDGVRGGPVELGPY
FVEVGREAVSVFMNSSSVHAGEALAFAGSHANGKGVVVMHRFPSVSSYTVSFASRTQAGL
GPAWRSVAVCYRMQPLSVYTNGTVFAADADIAFEAVTTETIPLEFVWYFGNDPPVQTTSR
SVRRRLRVPRGYQVTVKASSMVSSVVSKPHLVRVQQRIVANRLLSAASALVNTSVAFECR
ISFGTDVAYHWDFGDGTVSLGSHRSSHVYSREGEFTVQVLAFNAVSTATLQKRLFIVREP
CQPPPVKNMGPGKVQIWRSQPLRLGVTFEAAVLCDISQGLAYTWSFLDAKGSHVPLPAAV
NTRRQTVVLPGYTLASGNYTATAKVQIRGSVVHSDYCVGVEVRPRAPVSVIAEGTHLFVP
RNAPAPIVLRGSQSYDPDHPGATLRYYWTCSAASSPGQPCFEDSLPSLMDTGSPTIAFSA
RWLSTCCDQFLMTLTVSSGGRNSSEAQVFLSTRQDPTFRFVRISWASFRDASVNWNAELS
LRAACEGCGDVPGLSFSWELFLVNATEDGTVAAPSCRAVGLLGVSGLGAVWKSSEPIPLS
TEPSTPDPEGAPMLFPREPSPETLGQPAVSAPGSASPESTAGPRRAPAAGDTVVPGEDPE
EGLLGPELASWDEEAPTGSPSESGWSPPHPDFEAYYSDIQEAEPSRGRQPGGNTSPPESG
ASEDDEGSPSEGDNLVGPFLSAGRAQPALLIDWPKTPVSRAVFQSYTSSGITGPVVTIKP
FSLSSGRTYVLQASVVSTHGLLGKAQLYLVMNRAPQDVACQVQPHQGLEAHTLFSVFCMS
GKRDLEYEFSYQIGNAPRRTLYHGRDAQYYFVLPAGEPSDGYKVTVSTEITDGLGSKAQP
CAVAVTVLPRYRGMHCPTEDLYNSSLRNLSTLQLMGSYTEIRNYVTMLTGILNRLTTEDG
SASCGQWPLIRDALISSVCSFAFADEEEVMGVVPALKDLVSFPPKVSSASTLLLLRFARV
LLTQGRLRGGLVLGLGLRLELIRMLSRVWEGSGQEEALARTPVWEDSLEVVSALLLGCLS
LHHERELRVSAGPVEFLALLHSGPQQSVQSLGPVQVHLPGDLAGHSRAGEETQSPCYISQ
LVLFRKNPHPRAGRAAGQVGRAVGLTLHTCSGTRPIRRHRLASPMTVEFGEDDGPGSRRS
KTAFALLRDRVNLHPFAGLSEDAQESLQIHIEFSTPASRAFPVLLLVRFSERPTPSSFLV
KQTFLWEGQTVQIYTPAAAWKASKVGYLSLLDADYNRRSPNKYLAELVNYTVRFQWLRCL
LWDKGEWKSGSFSPQPGTSPEKVSCSYDRLALFSVLRRELNTSLEVSHVSELRSRPRNLI
PSACVVVFTVLYGLLAAKSRGVDHREKEKTGSIFLQEEVPPGHQLYAVVVDTGFRAPARF
SSKVYIVLCGENGLSETRELHCPRRPLFERNSRHTFVLSAPAQLGALRMIRLWHDGRGPS
PSWFVSHVMVKELCSGRAWFFPAQCWLAASRRGGRVDRELTCLRRGPGFWKLFHAKSTEY
LEDFHVWLSVYSRPSGSGFLHTPRLAVSFCLLCVYACLAALVTTGAHSQLFPAAGPTDLT
LRTSGLGLLCSLLGSPAAQLLSLLFRLSEEATRPPQAGPGSPQRGVQARAPQGPNSCRKT
LDAPEPDQAKLTAAELGHVPTHATPSPLQAAGGTIVEGAAVRGDTDLGLTLSFQHPASAA
LSGHHQAWRKAASSQSTACPHQGSGTWGASRSEPVLGEKSHCCPARPPAPGRGPGELLLP
RPRALLLWSGRAAWAVCGTTSLACALGTAFLGYRFEPAQCMWWLHLLLLSVVCCVFITQP
LMICVVALGFAWKRRDDSHFFAESLNEATRDLDVGLEGRSRTHGCPCSPGCVGAVAEVLA
ARQRARRLRWARPPAPAQLKVTRGRMKRERRTRAALRDVSVHALRLLLLLCLTSGRFSPE
ESSLNQALRKQFTSDQAWTSPELPGFAVLQRRVKDTLTQRFYDCAAASHQFDVSYSLLDI
LARTEWLENLTVGFILKHAYFFKKFISLFDRLPDLRPEGAVSREACENIVQSNMHPGPLT
CPAAWRCADLLGSCPPVSSAAHSWDGPRSPEGWWDWSLTVLLDGLHPAGPSPGAQPGPLG
GRCHLLGSPVIKQLKVAPQGSCKPPGPSSATVEDSPRSQSPEAEGPENRNRSPSCPGGCG
VSADCVHSLGRTRREVQAALTGLRASRWIGRSTRAVSVHFTLFHPPSRLFTSVALGVEIL
PTGALVPSSQVDSVSVFRSDSALDHGLVLSELASLVLSLAHLCFQVYAMVDEDGLSYWHK
PGNWLELAVAGTGFTYHVAAGHLATLAGEVADQFHRGFYQVFVDLSPMVSWNQRVRWLQG
FLSFLLLWRCVELLGPLALPAACSPVLCRSLSRALVPALAGALLLAAHCHLHRLLLATWA
PAAFPGLPLGFPRRSQTDSRFSLLRADPRAAACYRVALGAVLATLCFRTLRRALRTSSRK
RRSFPSRSRVRLGDVRAYARRKVLAVLGLGTPQSEEMEVAEDHNHYLDELASLMDELLTK
VNGLSDSPHLPLLEKQPRSPAAARAEGSPLPGGSQSPGDRDERTTPSQEPSRRLPSPAQF
SNPRSTDDGRPS
NT seq
8499 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccctccatctgctgggcagcgggttgggggctgcccgtggcggggagctg
aaggccaggcacaggaggcccccgcccaccttccgttccgatcggcagcctctggagcgg
gcacagccccaggtcccctcgcaggcagctgtgtgcagcggggaatgcaggcggctccct
ctcaggtctcctcaagggaacctcccggggagtggcaccctgcaactggacagtggccac
gtcctgccgtatcctcggagggcagtgctctgcaggggacgcggccgaagggctggaggg
gctgccgcgccctgggaccgaggcggctggatccgcgagcgcaccgccggggccgccttt
ccctttgcccacgtctcccagtgtcctcctgggactgtccccatgcgaggcacggatgga
gccctggaccctggcctccaccacttcctggaaacagacgcccaggcccctccagttctg
ggactccgcgtccacacggcgtctggagcagccctttgcctgctgatggcgttcggggac
agtgctggcattgaaacgagcctctacaatgtgaccaaggctgccacagtgaccgcctgc
caccaggaggggaaagttctcctctcgtgccttctcgcttctctttcagaggctgtccat
tcgctcagggctcttattgacgatggcgtccgtggaggccccgtggagctcgggccttac
tttgtggaagttggccgcgaggccgtgtctgtgttcatgaattccagcagcgtccacgca
ggggaggctctggcctttgctggctcccacgcgaacgggaagggcgtggttgtgatgcac
cgtttcccgtccgtgtcctcgtataccgtgtccttcgcttcccgaacgcaggcggggctc
ggcccggcgtggcgcagcgtggctgtttgctacaggatgcagcccttgtccgtctacacg
aacggaactgtgtttgccgcagacgcggacatcgcctttgaggctgttaccacggaaacc
atccccctggagttcgtgtggtattttggcaacgacccgccggtgcagacaacttccaga
agcgttaggagacggctccgtgtaccccgagggtaccaggtgacggtcaaagcctccagc
atggtcagcagcgtggtctccaagccccacctcgtcagggtgcagcagagaattgtggcc
aacaggctgctgtccgccgcctcggctctggtcaacaccagcgtggcctttgagtgcaga
atcagctttggcacggacgtggcctaccactgggactttggtgatggcacggtcagcctg
gggagccaccgcagcagccacgtctacagcagggagggggagttcacggtgcaggttctc
gccttcaacgccgtcagcaccgccacgctgcagaagcggctcttcatcgtgcgggagccc
tgccagccgccccccgtgaagaacatggggcccgggaaggtgcagatttggaggtcccag
cccctgagactgggggtcacctttgaagctgctgtcctctgcgacatctcccaaggcctt
gcctacacctggagcttcctggatgccaagggctcacacgtgccgctccctgctgccgtc
aacacccgcaggcaaacagtggtgttgccgggctacaccctggccagcgggaactacacg
gccacggccaaggtgcagatccggggcagtgtggttcacagcgactactgcgtgggtgtg
gaagtgcggccccgggcgcccgtcagcgtcatcgcggagggcacgcacctgttcgtcccc
aggaacgccccggcccccatcgtcctcaggggctcccagtcctatgaccccgaccatcca
ggggccacactcaggtactactggacatgcagtgccgccagctcccctgggcagccctgc
ttcgaggactcccttcccagcctcatggacacagggtcccccaccattgctttctcagca
agatggctgagcacctgctgcgaccagttcctcatgacactgacggtctccagcggcggc
cggaactcttcggaggcccaggtgttcctgtccacccgccaggaccccaccttcaggttt
gtgcgcatctcctgggccagcttcagggacgcctctgtcaactggaacgccgagctgtct
ctgcgggccgcgtgcgaaggctgcggggacgtgccggggctctccttctcctgggaactc
ttcctcgtcaacgccacagaggacggcacagtggcagcgccctcctgccgagccgtgggg
ctgctcggcgtctcgggacttggggccgtttggaagtcgtcggagccgatcccgctgtcc
acagagcccagcacgccagatcccgaaggggcacccatgctgttcccacgggagccttca
cccgagaccctgggccagcctgctgtctctgccccagggagcgcctccccggagtccacg
gcagggcctcgccgggctcctgctgctggtgacactgtggtcccaggagaggaccctgag
gaggggctactggggcctgagctggcgtcctgggacgaggaagccccgacagggagcccc
tctgagagcggctggtcccctccccaccccgatttcgaagcctactacagtgacatccaa
gaagcagagccgtcccgaggaaggcagccaggaggcaacaccagccccccggagtcaggg
gctagcgaggatgacgaggggagccccagtgagggggacaacctcgtgggccccttcctg
tctgccggccgagcccagcccgccctcctgatcgactggcccaagaccccagtcagcaga
gccgttttccaaagctacacctcgtcaggcatcacaggaccagtggtgaccatcaagccg
ttctcactgagcagtggacggacgtacgtcctgcaggcctccgtggtgtccacacacggc
ctcctcggcaaagcccagctgtacctggtgatgaaccgagctccccaggacgtggcctgc
caggtgcagccgcaccagggtctggaagcgcacaccctcttcagcgtcttctgcatgtca
ggaaagcgggacttggaatacgaattcagctaccagataggaaacgcccccagacgcacg
ctgtaccacgggagggacgcccagtattattttgtgctgccagctggcgagccctcggac
ggttacaaagtcacggtttccactgagatcacagatggcctgggctccaaggcacagccg
tgcgccgtggctgtgacggtgctgccccgttaccgtgggatgcactgccccaccgaggac
ctgtacaattccagcctgaggaacctgtcaaccctccagctgatggggagttacaccgaa
atcaggaactatgtcaccatgctcaccgggatcctgaaccgtctgaccacggaagacgga
agcgcctcgtgtggccagtggcctctgatccgggacgccctgatctcctcggtgtgcagc
tttgcttttgcagacgaggaggaagtgatgggtgtggtccctgcgctgaaggacctcgtg
agcttccctccgaaggtgagctctgccagcaccctgctcctgctcaggttcgcccgggtg
ctcctcactcaaggccgcctccgcggggggctcgtgcttggcctgggcctgaggctggag
ctcatccgaatgctgtccagggtctgggaaggctccgggcaagaagaagcgctggccagg
acccccgtctgggaggacagcctggaggtggtctcagccttgctgctgggctgcctctct
ctgcaccacgagcgggagctccgcgtgagcgctgggcccgtggagttcctggccctgctc
catagcggcccgcagcagtctgtccagagcctgggccctgtccaggtgcacctgcctggc
gacctggccgggcacagccgggctggcgaggaaacgcagagtccgtgctacattagccag
cttgtgctgttcaggaagaacccgcacccgcgggcaggacgcgctgccgggcaggtcggc
agagctgtgggcctcaccctgcacacctgctctggcacaagacccatccgccgccaccgg
ctggcgagccccatgaccgtggagtttggggaggacgatggcccgggcagccggagaagt
aagacggcgttcgctttgcttcgggacagagtgaatttgcacccgtttgcagggctttct
gaagacgcccaggaatctctgcagatacacatcgagttctccacgcctgcttcccgcgcc
tttcctgtcctcctgctcgtgaggttctccgagagacccacgccctcgtctttcctcgtg
aagcagaccttcctctgggaggggcaaaccgtgcagatttacacgcctgctgctgcgtgg
aaagcgtccaaggtgggctacttgtccttgttggacgctgactacaacagaagatcccca
aacaagtatttagctgagctggtgaactacacggtccgtttccagtggctgcggtgcctc
ttgtgggataagggagagtggaaatccggaagtttctccccacaaccgggaacgtctcca
gaaaaagttagctgcagctacgaccgcctcgcgctcttctcggtcctgagacgggagctg
aacaccagcctggaagtgagccacgtttccgagttacggagtcgcccacggaacctgatc
cccagcgcttgtgtggtggtgttcacggtcctttacgggcttttggctgctaaaagccgt
ggcgtggaccatcgtgagaaggagaaaacgggttccattttcctgcaagaagaggtccca
cccggccaccagctgtatgcagtcgtggtggacactggcttccgggccccggcgaggttt
tcctcgaaggtgtacattgttctgtgtggagagaacggactttcagagaccagagagcta
cactgcccgcggaggcccctgtttgagaggaattccagacacacctttgtcctgagcgct
cctgcccagctgggcgcgctccgcatgatccgcctgtggcacgacggccgggggccttcc
ccgagctggtttgtcagtcacgtgatggtgaaggagctatgctccggacgggcctggttc
ttccccgcccagtgctggctggctgcgagccgtcgtggcggccgcgtggaccgggagctc
acctgcctgcgccgggggcccggcttctggaagcttttccacgccaagtccacggagtac
ctggaggatttccacgtgtggctctcggtgtacagccggccctctggcagcggcttcctg
cacacgccgcggctggccgtctccttctgcctgctgtgcgtctatgcctgcctcgctgcc
ctggtcaccaccggagcccactcgcagctgttcccggctgccggccccaccgacctcact
ctccgcacctccgggctgggtctcctgtgcagcctgctgggctcccctgcagcacagctc
ctgtctctgctcttcaggctgagcgaggaagccacgaggcctccccaggctggaccaggc
agcccccagagaggtgtgcaggcgagggcgccccagggccctaattcctgcagaaagacg
ctggatgccccggagccagaccaggcaaagctcactgcagctgagcttggccacgtcccc
acccacgccaccccgtcccctctacaagctgcaggtggcactattgttgagggtgcagct
gtccgtggagacactgaccttggcctgaccttgtcattccagcatcctgcctcagccgct
ctctccgggcatcaccaggcctggaggaaggcagcaagcagccagagcacagcctgtcca
caccaggggtcagggacctggggagcctcccggagcgagcctgtcctgggtgagaagagc
cactgctgccctgcccgtcctccagctcccggccgtggtcccggagaactcctgctccca
aggcccagggcccttctgctttggtcaggccgggcagcgtgggccgtctgcgggacgact
tccctggcctgtgctctgggcacggcgttcctcggctacaggttcgagccggcgcagtgt
atgtggtggctgcacctgctgcttctctccgtggtctgctgtgtcttcatcacccagccc
ctcatgatctgcgtggtggcgttgggctttgcttggaaaagaagagacgacagccacttc
tttgctgaatcgttaaatgaagcgaccagggacctagacgtggggctggagggccgttcc
aggacccatggctgcccctgcagccctggctgtgtgggggccgtggcagaggtcctggct
gcccgacagcgagcccgccgcctgcgctgggcccggcccccggccccggcccagctcaag
gtcaccagggggaggatgaagagagagcgtcgcacacgggcagccctgcgagatgtctcc
gtgcacgcgctcaggctgctcctgttgctgtgtctgacatccgggaggttctccccggag
gaaagttccctcaatcaagctctccggaaacagttcacaagtgaccaggcgtggaccagc
cctgagcttccagggttcgctgtcctccagagaagagtcaaagacacgctgacgcagcgt
ttctatgactgtgcagctgcaagtcaccagtttgacgtgagttactctttgctggatatt
ttggccaggactgagtggcttgaaaatctaactgtaggttttattttaaagcacgcttac
ttttttaaaaaattcatttctttatttgataggctccccgacttacgacctgagggggct
gtgtcccgagaagcctgtgaaaacatcgtccagtccaacatgcatccaggtcccctgacc
tgcccagcagcatggcgctgcgcggacctccttggttcttgtcctcccgttagcagcgca
gcgcactcctgggatggcccgcggagcccggagggctggtgggactggagcctgaccgtg
ctgctggacggcctgcaccccgcagggccctcgccgggggctcagcctggacctctggga
gggagatgccacctgctgggctccccggtcatcaagcagctgaaagttgctccccaaggt
tcgtgcaagcctcccgggccgtcgtcggccacagtggaagactctcctcgctcacagagc
cccgaagctgaaggccctgagaaccgaaataggagccccagttgtcccgggggctgtgga
gtgagcgccgactgtgtgcacagcctgggcagaacgaggcgtgaagtccaggcggccctg
accggcctcagggccagcaggtggatcggccgcagcaccagggctgtgtccgtgcacttc
accctcttccaccctcccagccgcctcttcaccagcgttgccctgggagtggagattctc
cccacgggggctctcgtcccctcctcccaggtggactccgtcagcgtcttccgcagcgac
tcggccctggaccacggcctcgtgctgtccgagctggcctccctggtgctcagcctggct
cacctgtgcttccaagtctacgctatggtggacgaggacggcctcagctattggcacaaa
ccaggaaactggctggagctcgccgtggctgggacaggcttcacctaccacgtagccgct
ggccacctcgctaccctggctggggaagtcgctgaccagttccacaggggattttaccaa
gtgtttgtggacctcagcccgatggtgtcgtggaatcagagggtgcgatggctacagggg
ttcctctccttcctgctgctgtggaggtgtgtggagctcctcgggcccctggccctgccg
gccgcctgctctcccgtgctctgccgctcgctctcccgtgcccttgtaccagcgctggcg
ggggccctgctgctggccgcccactgccacctgcaccggcttctgctcgccacctgggct
ccagccgccttccccgggctgcccctcggctttcccagaagaagccaaacagactcacgc
ttcagccttctgcgggccgacccgcgcgccgcggcgtgctaccgcgtggcccttggtgcg
gtgctggccacgctgtgtttccgaacgctgagacgtgccctcaggacttcctcccgaaaa
agacggtcttttccgagtagatctcgcgtgaggctcggcgatgtcagagcttacgcccgg
aggaaggtcctggccgttctgggactggggacgccacagtcggaggagatggaggtggcc
gaggaccacaatcactacctggatgagcttgcaagtctgatggacgaacttctgacgaag
gtcaatggtttgtccgacagccctcacctgcctctcctagaaaaacaaccccggagtcca
gcagcggcaagggcagaaggcagtcccctgccggggggctcccagtcaccaggcgaccgg
gacgagagaacgaccccgtcacaagagccgtctcgccgcctcccttctccagcccagttc
tccaatcctcgttccacggacgacggccgcccatcctga
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