Oryctolagus cuniculus (rabbit): 100357344
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Entry
100357344 CDS
T03373
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100357344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100357344
Spliceosome [BR:
ocu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100357344
Complex C
U5 SnRNP specific factors
100357344
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
100357344
NCBI-ProteinID:
XP_051680514
Ensembl:
ENSOCUG00000000081
UniProt:
G1SCK0
LinkDB
All DBs
Position
19:14049336..14084736
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagccccg
ctgccggattacatgtcggaggagaagctgcaggagaaagcccgaaaatggcagcagttg
caggccaagcgctatgcagaaaagcggaagtttggatttgtggacgctcagaaggaagac
atgcccccagaacatgtcaggaagatcatccgagaccacggggacatgaccaacaggaag
ttccgccatgacaaaagggtctacttgggggccctcaagtacatgccccatgctgtcctc
aagctcctggagaacatgcccatgccttgggagcagattcgggatgtgcctgtgctgtac
cacatcactggagccatttccttcgtcaatgaaattccctgggtcattgagcctgtctac
atctcccagtgggggtcaatgtggatcatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgacgaggagccgccgttggattatgctgac
aacattctggatgttgagccactggaagctattcagctagagctggacccggaagaggat
gcgcctgtgttggactggttctatgaccaccagcctttgagggatagtaggaagtatgtg
aacggctcaacctaccagcgctggcagttcacactgcccatgatgtccactctctaccgc
ctggccaatcagctcctcacagacttggtggatgacaactatttctatctgtttgatttg
aaggccttctttacctccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaatctacaggacgaggactggaatgagttcaatgatattaac
aagatcatcatccggcagccgattcgcactgaatacaagattgcttttccctatttgtat
aacaatcttccacatcatgtccacctcacctggtatcacactcctaatgttgtattcatc
aaaacggaagatcctgatttgccagctttctactttgatcctttgatcaacccaatctcc
catagacactcggtcaagagccaggaaccgttgccggatgatgatgaagaatttgagctc
ccagaatttgtggagcccttcctgaaagacacacccctctacacagacaatacagccaat
ggcattgccctgctctgggccccgcggcccttcaacctacgctctggtcgcacccgccga
gccctggatataccccttgtcaagaactggtatcgggagcactgtcctgctgggcagcct
gtgaaagtgcgggtctcctaccagaagctgctgaagtactatgtcctaaatgccctgaag
catcggccccctaaggcccaaaagaagaggtatttgttccgttccttcaaagctaccaaa
ttctttcagtccacgaaactggactgggtggaggtggggctacaggtttgccgccagggc
tacaacatgctcaaccttctcatccaccgtaaaaacctcaactacctgcacctggactac
aacttcaacctcaaacctgtcaagacgctcacgaccaaggaaagaaagaaatctcgtttt
gggaatgctttccatttgtgtcgagaagttctgcgtttaactaagctggttgtggacagt
catgtgcagtatcggttgggcaatgtggatgccttccagctggcagatggactgcagtac
atatttgcacatgtggggcagctgacaggcatgtatcgctacaaatacaagctgatgcga
cagattcgcatgtgcaaggacctaaagcatctcatctattaccgcttcaacacgggccct
gtggggaagggccctggctgtggcttctgggctgctggctggcgggtctggctgtttttc
atgcgaggcattacccctttgctggagcgatggctgggcaaccttctggcccgacagttt
gaaggccgacactcaaagggggtggcaaagacagtaacaaagcaacgggtggagtcccac
ttcgacctggagcttcgggcagcggtgatgcatgacatcctggacatgatgcctgagggg
atcaagcagaacaaggcccggacaatcctgcagcacctcagtgaggcctggcgctgctgg
aaggccaacattccctggaaggtgccagggctgccaacacccatagagaatatgatcctt
cggtatgtgaaggccaaggctgactggtggaccaacactgcccactataatcgagaacgg
atccgccgtggggccactgtggacaagactgtgtgcaaaaagaacttgggccgcctcact
cgactctacttgaaggcagaacaggagcggcagcacaactacctgaaggacgggccttac
atcacagcagaggaagcagtagcagtgtataccaccaccgtgcattggttggaaagccgg
aggttctcgcccatcccattccccccactctcctacaagcatgacaccaagttgctcatc
ttggccttggagcgtctcaaggaagcctacagtgtgaagtctcgattaaatcagtctcag
agggaggagctaggtttgatcgagcaagcctatgacaacccccatgaggcattgtcccgc
atcaagcgtcacctcctcacccagagagcctttaaggaagtgggcattgagttcatggat
ctgtatagccacctggtgccagtgtatgacgtggagccactggagaagatcactgatgcc
tacctggaccagtacctgtggtacgaagctgacaagcgccgcctcttcccaccctggatc
aaacctgctgacacagaaccacctccactgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggacgtttgggagaccagtgagggcgagtgcaacgtcatgctggaatcgcgc
ttcgagaagatgtatgagaagatcgacttgacactgcttaataggcttctgcgactcatt
gtggaccacaacatagctgactacatgacagctaagaacaacgttgtcatcaactataag
gacatgaaccatacaaattcgtatggaatcatcagaggcctgcagtttgcctcattcatc
gtgcagtactatggcttggtcatggatttgcttgttttgggtttgcaccgagccagtgag
atggctgggccccctcagatgccaaatgactttctcagtttccaggacatcgccactgag
gctgcccaccccatccgtctcttctgcagatacattgatcgtatccatattttcttcagg
ttcacagcagacgaggctcgggacctgatccagcgttacctgacagagcaccctgaccct
aacaatgaaaacatcgttggctataataacaagaagtgctggcctcgagatgcccgtatg
cgtctgatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacggtcagtgactacggtgcagtgggagaacagcttcgtgtccgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggctttgagtgtcgcatcctgcctaaatgt
cgcaccagctatgaggaattcacccacaaggacggagtctggaacctacagaatgaggtt
actaaggagcggacagctcagtgtttcctgcgggtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaatcctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaatacagctcttattggcctgatgacatacttccgggaggctgtggtgaac
acccaagaactcctggacttgctggtgaagtgtgagaataagatccagacacgaatcaag
attggactcaactccaagatgccaagtcggttcccccctgttgtgttctatacccctaag
gagttgggtggactcggcatgctctcaatgggccatgtgctcatcccccagtcggacctc
aggtggtctaagcagacagacgtgggtatcacacacttccgttctggaatgagccatgaa
gaagaccagctgattcccaatttgtaccgttacatacagccctgggagagcgagttcatt
gattctcagcgggtctgggctgagtacgcgctcaagagacaagaggccattgctcaaaac
agacggctcactttagaagatctagaagactcatgggatcgtggcattcctcggatcaac
accctcttccagaaagaccggcacacattggcctatgataagggctggcgcgtccgaact
gactttaagcagtaccaggttttgaagcagaaccctttctggtggacgcaccagcggcat
gacgggaagctctggaacctgaacaactaccgcacagacatgatccaggccctgggtggt
gtggaaggcattctggagcatacactcttcaagggcacttacttcccgacctgggaaggt
cttttctgggagaaggccagcggctttgaggaatctatgaaatggaagaagctcactaat
gctcagcggtcaggattgaaccagattccaaaccgcagattcaccctctggtggtcccca
accattaaccgagctaacgtgtacgtaggctttcaggtgcagctggacctgacaggtatc
ttcatgcatggcaagatccccaccctgaagatctccctcatccagatattccgagctcac
ctgtggcagaagatccatgaaagcattgtcatggacttgtgtcaggtgtttgaccaagaa
ctggatgcgctggaaattgagacagtacagaaggagacgattcatcctcgaaagtcctat
aagatgaactcttcctgtgcagatatactgctctttgcctcgtataagtggaatgtctcc
cggccttcgttgctggcagactccaaggatgtgatggacagcaccaccactcagaagtat
tggattgacatccagttgcgctggggggactacgattcccatgacattgagcgctatgca
cgggccaagtttctggactacaccacagacaacatgagtatttacccttcacccacaggt
gtgctcattgccattgacctggcctataacctgcacagtgcctatggaaactggttccca
ggcagcaagcccctcatacagcaggccatggccaagatcatgaaggccaacccagccttg
tatgtgttacgtgaacgaatccgcaagggattgcagctctattcatctgagcccactgag
ccttatctgtcctctcagaattatggtgagctcttctccaaccagattatctggtttgtg
gatgacactaatgtctacagagtgacaatccacaagacatttgaggggaacttgacaacc
aaacccatcaatggggccatcttcatcttcaacccacgtacagggcagctattcctcaag
ataatccacacatccgtgtgggcgggacagaaacgtctggggcagttggctaagtggaag
actgctgaggaagtggctgccctgatccgatctctgcctgtggaggagcagcccaagcag
atcattgtcaccaggaaaggcatgctggacccgttggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcagagctgcagctccccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccactgagccgcagatggttctcttcaacctctat
gatgactggctcaagactatctcatcttacacggctttctcccgtctcatcctgattctg
cgtgctctgcatgtgaacaatgaccgggcgaaggtgatcctgaagccagataagactaca
attacagagccgcaccacatctggcccactctgactgatgaggagtggatcaaggtggag
gtgcagctcaaggatctcatcctggctgactacggcaagaagaacaatgtgaacgtggca
tcgctgacgcagtccgaaattcgcgacatcatcctggggatggagatctccgctccgtcc
cagcagcggcagcagatagcggagattgagaagcagactaaggagcagtcacagctgact
gcaacgcagactcgcacggtcaacaagcatggcgatgagatcatcacctccaccaccagc
aactatgagacccagaccttctcatccaagacggagtggagggtcagggccatctccgct
gccaacctgcacctaaggaccaatcacatctatgtctcgtctgatgacatcaaggagact
gggtacacctacatccttcccaagaatgtgctgaagaagttcatctgcatatctgacctc
cgggcccagattgcaggatacctgtatggggtgagcccaccggataacccccaggtgaag
gaaatccgctgcatcgtgatggtaccgcagtggggcacccaccagacggtgcacctgcct
ggccagctgccccagcacgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgagtccccccagctgtcaccccaggatgtcaccacccatgctaagatcatg
gctgacaacccgtcctgggatggtgagaagactattatcatcacctgcagcttcacacca
ggctcctgcacgctgacagcctacaagctgacccccagtgggtacgagtggggccgccag
aacacagacaagggcaacaaccccaagggttacctaccctcgcactacgagagggtccag
atgctgctgtcggaccgcttcctcggcttctttatggtccctgctcagtcctcgtggaac
tacaactttatgggtgttcggcatgaccccaacatgaagtatgagctgcagctggcaaac
cccaaagagttctaccacgaggtgcaccggccctcgcacttcctcaactttgccctcctg
caggagggcgaggtctactctgccgaccgcgaggacctctacgcctag
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integrated database retrieval system
