Oryctolagus cuniculus (rabbit): 100357418
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Entry
100357418 CDS
T03373
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100357418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100357418
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100357418
U7-dependent histone pre-mRNA processing factors
100357418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100357418
NCBI-ProteinID:
XP_002718535
Ensembl:
ENSOCUG00000027463
UniProt:
A0A5F9DGK0
LinkDB
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Position
18:30747334..30751114
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AA seq
604 aa
AA seq
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MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVAGPVPGPVPGPGPAPGLCPAPNVLLNQQNPPA
PQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGPGPGALAPGGAMQPQVGMPGVG
PVPLERGQVQMSDPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLG
PPHQGPPMHHPSGHDGRGPSSHEMRGGPLGDPRMLIGEPRGPMLDQRGLPMDGRVSRDSR
VMETRAMETDVLESRVMERRGMETCAMEARGMDTRGLEMRGPVPSSRGHMTGGMPGPGPI
NIGAAGPQGPRQVPSISSVGNPGGGMQGAGVQGAGMQGGGMQGAGMQGVGIQGAGMQGAG
KQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKS
TGAS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttagcggtgagagacccggccatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcgactgaggagcagttaaaggacattttctccgaggtcggt
tcggtggtcagtttccggctggtgtacgacagagagacgggaaaacctaagggttatggc
ttctgtgagtaccaagaccaggagaccgcgcttagtgccatgcggaacctcaatgggcgg
gagttcagtgggcgagcgcttcgggtggacaatgctgccagtgagaagaataaggaggag
ttaaagagcctggggcctgcagcacccatcattgactcaccctatggggaccccatcgat
ccagaagatgcccctgaatcgattaccagagcggtcgccagtctccccccggagcagatg
tttgagctgatgaagcagatgaagctctgtgtgcaaaacagtcaccaggaagcgcgcaac
atgctacttcaaaacccgcagctggcttacgcgctgctgcaggcgcaagtggtgatgaga
atcatggatccagagattgctctgaaaattctgcatcggaaaatacacgtcacaccgctg
atcccaggcaaatctcagcccgtcgctggccctgtgccgggccccgtgccgggccctggc
cctgcccctgggctctgcccagcaccgaatgttctgctgaatcagcagaatcctccagcc
cctcagcctcagcatttggctagaagaccagtcaaagacattcctcctctgatgcagact
cccatccaaggtggaattccagctcccggacccataccagcggcagtccccggccctggc
cctggcgccttagctcccggaggagcaatgcaaccccaagtcggaatgccaggggttggc
ccagtgcctttagagcggggacaagtgcagatgtcagatcccagagctcctatgccgcgt
ggacccatgactgccggcggcctgcctccccgtggactgctgggagatgctccaaatgac
ccacgtggagggactttgctttcagtcactggagaagtggagcctcgaggttacctgggc
ccaccccatcagggtccccccatgcaccatccctctggtcatgatggccgcggcccttcc
tcacatgagatgaggggagggccgttaggagaccccagaatgctaattggagaacccaga
ggacccatgttggatcaaaggggtttacctatggacggtagagttagtagagattctcga
gtgatggagactcgagccatggaaactgatgtcttggagtcacgagtgatggagagaaga
ggcatggagacttgtgcaatggaagccagaggcatggatacaaggggactggagatgagg
ggccccgtccccagttcgcgaggccatatgaccggtggaatgccaggccctgggcccatt
aacataggggcagctggccctcagggacccagacaggtcccaagcatttccagtgtgggg
aatcctggaggtggcatgcagggggcgggcgtgcagggagcgggcatgcaaggaggagga
atgcagggggcaggcatgcaaggagtgggcatccaaggagcaggtatgcagggggcaggt
aagcaaggtggaagccagcctagcagttttagtcctgggcagagccaggtaactccacag
gaccaagaaaaggcagctttgattatgcaggttcttcagctaactgcagatcagattgcc
atgctacctcctgagcaaaggcagagtattctgattttaaaggagcaaatccagaaatcc
actggagcttcctga
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