Oryctolagus cuniculus (rabbit): 100357422
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Entry
100357422 CDS
T03373
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03040
Spliceosome
ocu04657
IL-17 signaling pathway
ocu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100357422
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
100357422
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100357422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100357422
Spliceosome [BR:
ocu03041
]
Common components
Common spliceosomal components
SR proteins
100357422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
DDE_Tnp_1
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
100357422
NCBI-ProteinID:
XP_008269470
LinkDB
All DBs
Position
19:27764641..27768421
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AA seq
248 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSRT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggtggtgtgattcgtggtccggcggggaacaacgactgtcgtatctacgtg
ggtaacttacctccagacatcagaaccaaggacattgaggacgtgttttacaaatacggc
gctatccgcgacatcgacctcaagaatcgccgcgggggaccgcccttcgccttcgttgag
ttcgaggacccgcgagacgcggaagacgcggtgtacggtcgcgacggctatgattacgat
ggatatcgtctgcgggtggagtttccccgaagcggccgtggtaccggtcgaggcggcggc
gggggtggaggaggtggagctccccggggccgctatggccccccatccaggcggtctgaa
aacagagtggttgtctccggactgcctccaagtggaagctggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtttaccgagatggcactggtgtcgtg
gaatttgttcggaaagaagatatgacctatgcagttcgaaaactggataacactaagttt
agatctcatgagggagaaactgcctacatccgggttaaagttgatgggcccagaagtcca
agttatggaagatctcgatctcgaagccgtagtcgtagcagaagccgtagcagaagcaac
agcaggagtcgcagttactccccaaggagaagcagaggatcaccacgctattctccccgt
catagcagatctcgctctcgtacataa
DBGET
integrated database retrieval system
