Oryctolagus cuniculus (rabbit): 100357580
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Entry
100357580 CDS
T03373
Name
(RefSeq) protocadherin-17 isoform X3
KO
K16499
protocadherin delta 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100357580
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
100357580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Cadherin_4
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
100357580
NCBI-ProteinID:
XP_008258257
Ensembl:
ENSOCUG00000005237
LinkDB
All DBs
Position
8:complement(52793942..52890639)
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AA seq
1166 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLTPADRGGGGGGS
GGRSKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNARCQLSLEVFANDKEI
CMIKVEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDD
HGLFALDVKARGDGTKFPELVIQKALDREQQSHHTLVLTALDGGEPPRSATMQINVKVID
SNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFS
IDPKTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLLDRNDNAPSIGFVS
VRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGGGLGGPGGPVPFK
LEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFSVKILDENDNPPRFT
KGLYVLQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGA
IYALRSFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTA
ELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWE
DVTPVVELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLS
TISIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSE
VEERNAMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCH
TSFTGQGTNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHG
DSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRC
WMPQFPAANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIA
NVKPYLKAKRALSPLLQEVPSASSSPTKACIEPCTSTKGSLDGCEAKPGALAEASSQYLP
TDSQYLSPSKQPRDPPFMASDQMARVFADVHSRASRDSSEMGAVLEQLDHPNRDLGRESV
DAEEVVREIDKLLQDCRGNDPVAVRK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgcttcttgctatgggcccctgccctgacgctcaaaaac
ctcaactactccgtgcccgaggagcaaggggccggcacagtgatcggcaacatcggcaag
gatgcccgactgcagcccgggctaacgccggctgaccgcggcggcggcggcggcggcagc
ggcgggcgcagcaagtcgggcagctaccgggtgctggagaactcggcgccgcacctgctg
gacgtggacgcagatagcgggctcctgtacaccaagcagcgcatcgaccgcgagtccctg
tgccgccacaacgccaggtgccagctgtctctcgaggtgttcgccaacgacaaggagatc
tgcatgatcaaggtggagatccaggacatcaacgacaatgctccgtccttcccgtcggac
cagatcgagatggacatctcggagaacgcggcccccggcacccgcttcccgctcaccagc
gcccacgacccggacgcgggcgaaaacgggctccgcacctacctgctcacgcgcgacgac
cacggcctcttcgccctggacgtcaaggcccgcggcgacggcaccaagttcccggagctg
gtcattcagaaggccctggaccgcgagcagcagagccaccacacgctggtgctgaccgcc
ctggacggcggcgagccgccgcgctccgccaccatgcagatcaacgtgaaggtgatagac
tccaacgacaacagcccggtcttcgaagcgccctcctacctggtggaactgcctgagaac
gctccgctgggcaccgtggtcatcgatctgaacgccacggacgccgacgagggccccaac
ggcgaagtgctctactctttcagcagctacgtccccgaccgcgtgcgggagctcttctcc
atcgaccccaagaccggcctcatccgcgtgaagggcaacctggactacgaggagaacggg
atgctggagatcgacgtgcaggccagagacctggggccgaaccccatcccagcccactgc
aaagtcacggtcaagctcctcgaccgcaacgacaacgcgccgtccatcggtttcgtctcc
gtccgccagggggcgctcagcgaggcagccccgcccggcacggtcatcgccctggtgcgg
gtcaccgaccgggactcgggcaagaacgggcagctgcagtgtcgggtgctgggcggcgga
gggaccggcggcggcggcggcggcggcctgggcgggcccgggggtcccgtccccttcaag
ctggaggagaactatgacaacttctacacagtggtgactgaccgcccgctggaccgggag
acccaggacgagtacaacgtgaccatcgtggctcgggacgggggctcgcctccgctcaac
tccaccaagtcgttctcggtcaagatcctggacgagaacgacaacccgcctcggttcacc
aaggggctctacgtgctgcaggtgcacgagaacaacattcccggggaatacctaggctcc
gtgctcgcccaggatcccgacctgggccagaacggtacggtgtcctattccatcctgccc
tcgcacatcggcgacgtgtccatctacacctacgtgtccgtcaaccccaccaacggggcc
atctacgccctgcgctccttcaactacgagcagaccaaggcctttgagttcaaggtgctc
gccaaggactcgggggcgcccgcgcacctggaaagcaacgccacggtgagggtgaccgtg
ctggacgtgaatgacaacgcgcccgtgatcgtgttgcccacgctgcagaacgacacggcc
gaactgcaggtgccgcgcaacgccggcctgggctacctggtgagcaccgtgcgcgcgctg
gacagcgattttggcgagagcgggcgcctcacctacgagatcgtggacggcaacgacgac
cacctgttcgagatcgacccgtccagcggcgagatccgcacgctgcaccccttctgggaa
gatgtgacgccggtggtggagctggtggtgaaagtgacggaccacggcaagcccaccctg
tccgcagtggccaagctcatcatccgctcggtgagcggctccctgcccgagggggtgccc
cgggtgaacggcgagcagcaccactgggacatgtcgctgccgctcatcgtgactctgagc
accatctccatcatcctcctagcggccatgatcaccatcgccgtcaagtgcaagcgcgag
aacaaggagatccgcacttacaactgccgcatcgccgagtacagccacccgcagctgggc
gggggcaagggcaagaagaagaagatcaacaagaacgatatcatgctggtgcagagcgag
gtggaggagaggaacgccatgaacgtcatgaacgtggtgagcagcccctccctggccacc
tcccccatgtacttcgactaccagacccgcctgcccctgagctcgccccggtcggaggtg
atgtacctcaaaccggcctccaacaacctgactgtcccccaggggcacgcaggctgccac
accagcttcaccggacaagggactaatgcgagcgagacccctgccactcggatgtccata
attcagacagacaattttcccgcagagcccaattacatgggcagcaggcagcagtttgtt
caaagtagctccacgtttaaggacccagaaagagccagcctgagagacagtgggcacggg
gacagtgatcaggctgacagtgaccaagacactaacaaaggctcctgctgtgacatgtct
gttagggaggcactcaagatgaaaaccacttcaactaaaagccagccacttgaacaagaa
ccggaagagtgtgttaattgcacagacgaatgccgagtgcttggtcattctgacaggtgt
tggatgccacagttccctgcggccaaccaggctgaaaatgcagattaccgcacaaatctc
tttgtacccacagttgaagctaatgttgagactgagacttacgaaactgtgaatcccact
gggaaaaagactttttgtacatttggaaaagacaagcgagagcacactattctcattgcc
aatgttaaaccttatttaaaagccaaacgtgccctgagccctctcctccaagaggtcccc
tcagcatcaagcagccccaccaaggcatgcattgagccttgcacctcaacgaaaggctcc
ctggatggctgcgaagcaaaaccaggagccctggccgaagcaagcagccagtacttgccc
actgacagtcagtatctgtctcccagtaagcaaccaagagaccctcccttcatggcttct
gatcagatggcaagggtcttcgcggatgtgcattcccgagccagccgggattccagcgag
atgggcgctgttctcgagcagttggaccatcccaacagggatctgggcagagagtcggtg
gatgcagaggaagttgtgagagaaattgataagcttttgcaagactgccggggaaatgac
cctgtggctgtgagaaagtga
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