Oryctolagus cuniculus (rabbit): 100357778
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Entry
100357778 CDS
T03373
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100357778
03009 Ribosome biogenesis [BR:
ocu03009
]
100357778
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100357778
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100357778
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
Pre-60S particles
Helicases
100357778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100357778
NCBI-ProteinID:
XP_051700899
Ensembl:
ENSOCUG00000016108
LinkDB
All DBs
Position
4:complement(550666..571757)
Genome browser
AA seq
764 aa
AA seq
DB search
MLAELGLIGTIGEDDEVPVEPESDSGDEEEEGPIVLGRKQKALQKNRSADFNPDFIFTEK
EGAYDGSWALAEVMSQLKRKRAATTLDEKIEKVRKKRKLEDKEAKSGKLEKETEAKEGPE
PAGPEEPAGRDEEGSEDEEPETDYSSAEEDILTKADTLKVKEKKKKKKKGQEMGGFFEDA
SQYDESLSFQDMNLSRPLLKAISAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAA
FALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKS
QEAALRAAPDILIATPGRLIDHLHNCPSFHLNSIEVLILDEADRMLDEYFEEQMKEIIRM
CSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDRE
AIVAALLTRTFTDHVMLFTQTKKQAHRLHILLGLLGLQVGELHGNLSQTQRLEALRRFKD
EQIDVLVATDVAARGLDIEGVKTVVNFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEE
RKMLKEIVKAAKAPVKARILPQDVILRFRDKIEAMEKDVYAVLQLEAEEKAMQQSEAQIN
TAKRLLEKGKEAPGQEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDAKKK
GEMTAEERSQFEILKAQMFAERLAKRNRRAKRARAMPEEEPVRGPAQKPEPRKKSVFDEE
LTNTSRRALKQYRAGPSFEERKRLGLAHQRRGGTFKSKSRYKRK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgagctcggtttaatcggaaccatcggcgaggatgacgaggtgccggtggag
cccgagtccgactccggagacgaggaggaggaggggcccattgtgctgggcaggaagcag
aaggccttgcagaagaaccgcagtgccgatttcaaccctgacttcattttcaccgagaag
gagggggcgtacgatggcagctgggccctggctgaggtcatgagccagctcaagaggaag
agggcagccactacattagatgagaagatcgagaaagttcggaagaaaaggaaactggag
gataaagaagccaaatctgggaagttggagaaggagacagaagccaaggagggccctgag
ccagcggggccggaggagccagcggggagagatgaggaagggtcggaagatgaggagcca
gagactgactactcgtccgcagaggaggacatcctcaccaaagcagatacactcaaagta
aaggagaagaagaagaagaagaagaaaggacaggaaatgggtggattttttgaagatgcc
tctcagtatgatgaaagcctctccttccaggacatgaacctgtcccgccctctgctgaag
gccatctctgccatgggcttcaagcagcccaccccaatccagaaggcgtgcatacccgtg
ggtctgctgggaaaggacatctgcgcctgcgcagccaccgggacaggtaagacggctgct
ttcgcgctgcccgtgttggagcggctgatctacaagccccgccaggcgcccgtcacccgg
gtgctggtgctggttcccacgcgcgagctgggcatccaggtgcactccgtgaccaagcag
ctggcgcagttctgcagcatcaccacgtgcctggcggtgggtggcctggacgtgaagtct
caggaagcggctcttcgggcggcgcccgacatcctcatcgccacgccggggcggctcatc
gatcacctccacaactgcccctccttccacctgaacagcatcgaggtgctcatcctggat
gaggccgacaggatgctggacgagtacttcgaggagcagatgaaggagatcatccgcatg
tgctcgcaccaccggcagaccatgctcttctcggccaccatgacggacgaggtgaaggat
ctggcttcagtctccttgaagaaccccgttcggatatttgtgaacagcaacacggatgtg
gcccctttcctgcggcaggagttcatccggatccggcctaaccgggaaggggaccgggaa
gccatcgtggcagctctgctgaccagaaccttcaccgaccacgtgatgctgttcacgcag
accaagaagcaggcccaccgcctgcacatcctcctgggcctcctggggctgcaggtgggc
gagctccacggcaacctgtcccagacgcagcggctggaggccctccggcgcttcaaggat
gaacagattgacgtcctggtggccacagatgtggcagcccgtggacttgacatcgaaggg
gtcaaaacggttgtcaatttcacgatgcccaacaccatcaaacattacgtccaccgcgtg
gggcggaccgcgcgtgccggcagggccgggcgctcggtgtctctggtgggagaagaggag
cgcaagatgctgaaggagatcgtgaaggccgccaaggcccctgtgaaggcccgcatactg
ccccaggacgtcatcctcaggtttcgggacaagatcgaggccatggagaaggacgtgtac
gcggttctgcagctggaggcggaggagaaggcaatgcagcagtcggaagcccagatcaac
acagcaaaacggctcctggagaaggggaaggaggcgccgggccaggagcctgagaggagc
tggttccagaccaaagaggagaggaagaaagaaaaaattgccaaggcgctgcaggaattt
gacttggccttgagaggaaagaagaaaaggaagaagtttatgaaggatgccaagaagaag
ggggagatgacagcagaagaaaggtcacagtttgaaatcctgaaggcacagatgtttgcc
gagcgcctggccaagaggaatcgcagagccaagcgggcccgggccatgcctgaggaagag
cccgtgagaggccctgcccagaagccggagccgaggaagaagtctgtgtttgacgaagag
ctcaccaacaccagcaggagggccctgaagcagtaccgcgccggcccttcctttgaagaa
aggaaacggctgggcttggcccaccagagacgaggagggaccttcaagtctaaatccagg
tacaagaggaagtag
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integrated database retrieval system
