Oryctolagus cuniculus (rabbit): 100358121
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Entry
100358121 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04120
Ubiquitin mediated proteolysis
ocu04137
Mitophagy - animal
ocu04144
Endocytosis
ocu04340
Hedgehog signaling pathway
ocu04350
TGF-beta signaling pathway
ocu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100358121
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100358121
04350 TGF-beta signaling pathway
100358121
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100358121
04137 Mitophagy - animal
100358121
09144 Cellular community - eukaryotes
04520 Adherens junction
100358121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100358121
04121 Ubiquitin system [BR:
ocu04121
]
100358121
03029 Mitochondrial biogenesis [BR:
ocu03029
]
100358121
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100358121
Membrane trafficking [BR:
ocu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100358121
Autophagy
Mitophagy
Other mitophagy associated proteins
100358121
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
HECT type E3
100358121
Mitochondrial biogenesis [BR:
ocu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100358121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
GpA_nuclease
DUF7350
Motif
Other DBs
NCBI-GeneID:
100358121
NCBI-ProteinID:
XP_017204768
Ensembl:
ENSOCUG00000012776
LinkDB
All DBs
Position
19:complement(46895475..47036608)
Genome browser
AA seq
748 aa
AA seq
DB search
MSNPGGRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKSDSVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKL
GPNDNDTVRGQIVVSLQSRDRIGTGGQVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCFVDENTPISGTNGATCGQSSDPRLAERRVRSQRHRN
YMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLP
PGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNRQNQLKDQQQQQVVSLCPDDT
ECLTVPRYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWK
RLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHL
SYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILEND
ITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLA
LQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLKHCTPDSNVVKWFWKAV
EFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRI
DIPPYESYEKLYEKLLTAIEETCGFAVE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccccggaggccggcggaacgggcccgtcaagctgcgcctgacagtactctgt
gcaaaaaacttggtgaaaaaggattttttccgacttcctgatccatttgctaaagtggtg
gttgatggatctgggcagtgccattctacagatactgtgaagaatacacttgatccaaag
tggaatcagcattatgatctgtatattggaaagtctgattcagttaccatcagcgtatgg
aatcacaagaagatccataaaaaacaaggtgctggatttcttggttgtgttcgtcttctt
tccaatgccatcaatcgcctcaaagacactggttatcagaggttggatctatgcaaactt
gggccaaatgacaatgatacagttagaggacagatagtagtgagtcttcagtccagagac
cgaataggcacgggaggacaagttgtcgactgcagtcgtttgtttgataatgatttacca
gacggttgggaagaaaggcgaactgcttctggaagaatccagtatctaaaccacattaca
agaactacacaatgggaacgtccaacacgaccggcgtctgaatattctagtcctggcaga
cctcttagctgctttgttgatgagaacactccaattagtggaacaaatggtgcaacatgt
ggacagtcttcagaccccagactggcagagaggagggtcaggtcacagcgtcatagaaat
tacatgagcaggacacacttacatactcctccagacctcccagaaggctatgaacagagg
acaacgcaacaaggtcaggtgtatttcttacatactcagactggtgtgagtacatggcat
gatccaagagtgcctagggatcttagcaacatcaattgtgaagagcttgggcctttgcct
cctggatgggagatccgtaatacagctacaggcagagtttatttcgttgaccataacaac
agaacaacacaatttacagatcctcggctctctgctaacttgcatttagttttaaaccgg
caaaaccagttaaaagatcaacagcaacagcaagtggtgtcattatgccctgatgacaca
gagtgtctgacagtcccaaggtacaaacgagacctggttcagaaactaaaaattttgcgg
caagaactctctcagcagcagcctcaggctggccactgtcgcattgaggtttccagggag
gagatttttgaggaatcatatcggcaggttatgaaaatgagaccaaaagatctgtggaag
cgattaatgataaaatttcgtggagaagaaggtcttgactatggaggggttgccagggaa
tggttgtatctcctgtcacatgaaatgttgaatccatactatggccttttccagtattca
agagatgatatctatacgttgcagataaatcctgattctgcagtaaacccggagcattta
tcatatttccactttgttggacgaataatgggaatggctgtgtttcatggacattacatt
gacggtggcttcacactgccgttttataaacagttacttgggaagtcaattactttggat
gacatggagttggttgatccagatcttcataacagtttagtgtggatacttgaaaatgat
attacaggtgttttggaccataccttctgtgttgaacataatgcatatggtgaaattatt
cagcatgaacttaagccaaatggcaaaagtatacctgttactgaagaaaataaaaaagaa
tatgtcaggctgtatgtgaactggagatttttacgaggcattgaggctcaattcctggct
ctacagaaaggatttaatgaagtcattccacagcatctgctgaagacatttgatgaaaag
gagttagagctcattatttgcggacttggaaagatagatgttaatgactggaaggtaaac
accaggttgaaacactgcacaccagacagcaatgtggtcaagtggttctggaaagctgtg
gaattttttgatgaagagcgacgagcgcgattacttcagtttgtgacagggtcatccaga
gtgcctctccagggcttcaaagcgttacagggtgctgcgggcccgcggctcttcaccatt
caccagattgatgcctgcaccaacaatctgccaaaagcccacacttgcttcaatcgaata
gacattccgccctatgaaagctatgaaaagctctatgaaaagctgctaacagccatcgaa
gaaacatgtggatttgctgtggaatga
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