KEGG   Oryctolagus cuniculus (rabbit): 100358254
Entry
100358254         CDS       T03373                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03020  RNA polymerase
ocu03420  Nucleotide excision repair
ocu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100358254
  09124 Replication and repair
   03420 Nucleotide excision repair
    100358254
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100358254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100358254
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100358254
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100358254
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100358254
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom
Other DBs
NCBI-GeneID: 100358254
NCBI-ProteinID: XP_051705617
Ensembl: ENSOCUG00000021449
LinkDB
Position
7:113895258..113911765
AA seq 142 aa
MAAGGVDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLTYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggccggtggcgttgatccgcgggctggcgacgtcgaggaggacgcttcacagctc
atctttcccaaagagtttgaaacagctgagacacttctaaattccgaggtgcatatgctt
ctggagcatcgcaagcagcagaacgagagtgcagaggatgaacaggaactctcggaggtc
ttcatgaagactttgacctacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgtccgcagcttgctgctccagaagaagcttcataagtttgagttggcctgttta
gccaacctttgtccagagactgccgaggagtcaaaggccctgatcccaagcctggagggg
cgatttgaagatgaggagctgcaacaaattcttgatgatattcagacaaagcgcagcttt
cagtattaa

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