Oryctolagus cuniculus (rabbit): 100358256 Help Entry 100358256         CDS       T03373                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04151   PI3K-Akt signaling pathway ocu04510   Focal adhesion ocu04512   ECM-receptor interaction ocu04820   Cytoskeleton in muscle cells ocu04926   Relaxin signaling pathway ocu04933   AGE-RAGE signaling pathway in diabetic complications ocu04974   Protein digestion and absorption ocu05146   Amoebiasis ocu05165   Human papillomavirus infection ocu05200   Pathways in cancer ocu05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:ocu00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100358256   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100358256  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100358256   09142 Cell motility    04820 Cytoskeleton in muscle cells     100358256  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     100358256   09154 Digestive system    04974 Protein digestion and absorption     100358256  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100358256   09162 Cancer: specific types    05222 Small cell lung cancer     100358256   09172 Infectious disease: viral    05165 Human papillomavirus infection     100358256   09174 Infectious disease: parasitic    05146 Amoebiasis     100358256   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100358256  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ocu04147]     100358256    00536 Glycosaminoglycan binding proteins [BR:ocu00536]     100358256 Exosome [BR:ocu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    100358256 Glycosaminoglycan binding proteins [BR:ocu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100358256 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  100358256 NCBI-ProteinID:  XP_051705932 Ensembl:  ENSOCUG00000013232 LinkDB All DBs Position 8:143227..272734 Genome browser AA seq 1669 aa AA seqDB search MGPRLGLWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGERGPLGPPGLPGFTGNPGPPGLPGMKGDPGEILGHIPGTLLKGERGFPGP PGIPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVSGPP GVPGQAQVKEKGDFATKGEKGQKGEPGFQGIPGIGEKGEPGKPGPRGKPGKDGEKGEKGS LGFPGDSGYPGLPGRPGPQGDKGEAGPPGPPGIVIGTGPLGEKGERGFPGAPGLRGEPGP KGYPGIQGQPGLPGFPVPGQPGAPGFPGERGEKGDQGLPGVSLPGPSGKDGLPGLPGPPG PPGQPGHTNGIVECQPGPPGDQGPPGTPGQPGLSGEVGEKGQKGDSCLVCDMEGLRGPPG PQGPPGEIGFPGQPGAKGDRGFPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLK GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI GPPGPPGFGPIGPAGDKGQAGFPGSPGSPGLPGPKGEAGRVVPLPGPPGAEGLPGSPGFQ GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPQGAAGLPGDMGPPGSPGRQGFSG SPGSPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGSVGGPGIPGEHGAIGPPGLQGI RGDPGPPGVQGPVGPPGAPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG PKGDKGAQGLPGLTGQSGLPGLPGQQGTPGIPGFPGPKGEMGVMGTPGQPGSPGPAGAPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDPGVAGFPGSPGE KGEKGSTGIPGMPGSPGPKGSPGSAGYPGSPGLPGEKGDKGLPGLDGVPGIKGEAGLPGQ PGPTGPAGQKGEPGRDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGDVGFPGLAGSP GIPGPKGEPGFAGPPGPQGQPGLPGAPGRPVEGPKGDRGPQGQPGLPGLPGPMGPPGLPG LDGLKGDKGNPGWPGAPGAPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKG LPGLQGIKGDQGDQGIPGPKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGPPGPK GQQGVTGSVGLPGPPGIPGFDGAPGQKGETGPFGPPGPRGLPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTIHDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIVGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELHTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcctctggctgctgctgctgcccgccgccctcctgctgcacgag gagcgcagccgggccgccgcgaagggtggctgcgctggctccggctgcgggaagtgtgac tgccacggagtgaagggacagaagggagaaagaggcctcccagggctacaaggagtcatc ggctttcccggaatgcaaggacccgaggggccgcagggaccaccaggacaaaagggtgac accggagagccagggctgcccggcacgaaagggacaaggggacctccaggagccgccggc taccccgggaacccaggacttcctggcattcccggccaagatggccccccaggcccccca ggtatccccggatgcaacggtacaaagggagagagaggccccctgggcccacctggtttg cctggattcacgggaaatcctggaccgccagggttgccaggcatgaagggagatccaggg gagatccttggccacatccccgggacactgttgaaaggtgaaagaggatttcctggaccc cccggcataccaggctccccaggattgccggggctgcaaggacctgttggccctccaggg ttcactggacccccgggtcccccaggccctcccggccctccaggtgaaaagggccaaatg ggcttaagtttccaaggaccgaaaggtgaaaagggagatcaaggcgtcagtgggcctccg ggagtcccaggacaagctcaagtgaaggagaaaggggactttgccaccaagggagagaag ggtcaaaaaggcgaacctggatttcagggaattccagggattggcgagaaaggcgaaccc ggaaaaccagggccccggggaaaacccggcaaagacggcgagaagggggagaaggggagc ctgggcttccctggagactcggggtaccccggactccctggccgcccaggcccgcaggga gacaaaggagaagctggccctccgggcccacctggcattgtgatcggcacgggacctttg ggagagaaaggagagcgaggcttcccgggagcaccggggctcagaggagagccaggccct aaaggttacccagggatccaaggccagccaggacttccaggctttcctgtgcccggccag cccggtgctcccggcttccccggcgagagaggagaaaaaggcgaccagggactgccaggc gtgtctttgccaggaccaagcggaaaggacgggctcccaggccttcccggcccccccggg ccccccgggcagccaggccacaccaatggcatcgtggagtgtcagcccgggccacctggc gatcagggtcctcccggcacaccagggcagccgggattgagtggcgaagtcggagagaaa ggtcagaagggtgacagctgcctcgtctgtgacatggaagggctgcgtggaccccctggg ccgcaggggcccccaggagagatagggttcccgggccagccaggggccaagggcgaccgc gggttccccggcagggatggacttgaaggattgccgggaccacaaggtgtgccgggcctg atgggccagcccggagccaagggagagcccggtgagatctatttcgacgcaagactcaag ggagacaaaggagaccccggcttcccaggacagcccggcatgccagggagagcggggtcc cccgggagagatggccacccgggcctgcctggtcccaaaggctccccgggctcagtagga ttgaaaggagaacgcggcccccctgggggtgtcggcttccccgggagtcgtggtgacatc ggcccccctggacccccagggtttggtcctattggccccgctggagacaaaggacaagca ggttttcccggaagccccgggtcccccggcctgccaggtccgaagggtgaagcaggacga gttgtccccttacctggcccgcctggggcagaaggactgccggggtccccgggtttccaa ggcccccaaggcgacaggggcttccctggaaccccaggacgaccaggcctccccggagag aagggcgccgtgggccagcccgggattggatttccagggcctccaggcccccagggtgcg gccggcttacctggagacatgggacctcctgggagtccaggtcgccagggattcagtggc tcacctggcagcccaggtgtgccaggccaaaagggggagcctggcattggtctgccagga ctcaagggccttccaggccttcccggcattcctggcacgcctggggagaaggggagcgtc ggaggacccggcattcccggagagcatggagccattggcccccctgggcttcagggcatc cgaggcgaccccggacctcctggagtacaaggccccgtgggacctccgggagccccagga ataggcccccctggagctatgggcccccctggagggcagggaccgccaggctcatcaggt cctcctggcgtgaaaggagagaagggtttccccggcttcccgggactggacatgcctggc ccgaaaggagacaaaggtgcccaaggacttcccggcttaaccggacagtcggggctcccc gggcttcctggccagcagggcacgcctggaatccctggcttcccaggtcccaagggagaa atgggcgtcatggggacccctgggcaaccgggctcgccgggaccagcgggcgccccagga ttgccgggtgaaaaaggggaccacggcttcccgggctcctcaggacccaggggagaccct ggcttcaagggtgacaaaggagacgtcgggctcccgggcaaaccgggctccatggataaa gtggacatgggcagcatgaaaggacagaagggggaccaaggagagaaagggcaaatcgga ccaactggtgacaagggatcccgcggagaccctggaaccccaggagtgcccgggaaggac gggcaggcggggcacccaggacagccagggccgaaaggtgatcccggcatcagcggaacc ccaggtgccccgggcctccctgggcctaaaggatcggttggtggaatgggcttgccagga accccgggagagaagggcgtgcctggcatccctggtccccagggcgtccctggcttacct ggagagaaaggagccaaaggagagaaggggcaggcaggtctgcctggcatcgggattccc ggaaggcctggagacaagggagacccaggggtggccggattcccaggaagccccggagaa aagggggagaaaggcagcaccgggattccaggaatgccggggtccccaggcccgaagggg tctccaggcagtgccggctatccagggagccctggcttgcctggtgagaaaggtgacaaa ggcctccccggattggacggtgttcctggcatcaaaggagaagcaggccttcctgggcag cccggtcccacgggccctgcaggccagaagggggagcccggcagggacggaatcccaggg tctgccggggagaagggtgaaccaggtctgccaggaagaggattcccaggattcccaggg gccaaaggagacaaaggttccaaaggcgacgtgggtttcccagggttggctgggagccca ggaatccccggacccaaaggcgagccaggattcgcgggtcctcccgggccccaaggacag cctgggctgcctggcgctcccggccgccccgtggaggggcccaaaggagaccgaggacct cagggacagccaggcctgccagggcttccgggacccatggggccgccaggactccctggg ctggatggactgaagggagacaaggggaatccaggctggccaggtgcccccggggcccca gggcccaagggagatccaggcttccagggcatgccgggcattggcggctctccagggatc acgggctccaagggcgacatgggaccccccggagttcccgggtttcaaggtcagaaaggt cttcctggcctccagggaattaaaggggatcagggtgatcaaggcatccccggacctaaa ggtctcccagggccccctggccccccaggtccttacgatatcatcaagggcgagccagga ctcccaggccctgagggtcccccaggtctgaaagggcttcagggaccaccaggccctaaa ggacagcaaggcgtgacgggatcggtgggcttacctggaccgcccggtattcctggcttc gatggtgcccctggccagaaaggagagacgggaccatttgggcctcctggtcctagaggg ctccctggtcctccaggccctgatgggctgccaggatccatggggcccccaggcacccca tctgtggaccacggcttcctggtgaccaggcacagtcaaacgatccacgacccgcagtgc cctcctggaaccaaaattctctatcacgggtactccctgctttacgtgcaaggcaacgag cgggcccacggccaggacttgggcacggccgggagctgcttgcgcaagttcagcaccatg cccttcctgttctgcaacatcaacaacgtgtgcaacttcgcctcccgcaacgactactcc tactggctgtccacccccgagcccatgcccatgtccatggcgcccatcgtcggggacaac atcaggcccttcatcagcaggtgcgccgtgtgtgaggccccagccatggtgatggcggtg cacagtcagaccattcagatcccgccctgccccaacgggtggtcctcactgtggatcggc tactcctttgtgatgcacaccagcgccggggctgaaggttccggccaagccctggcttcc cccggctcctgtctggaagagtttagaagcgcaccgttcatcgagtgccacggccgtggg acctgcaactactacgccaacgcgtacagcttctggctcgccaccatagagagaagcgag atgttcaagaagcccacgccgtccaccttgaaggcaggggagctgcacacgcatgtcagc cggtgccaagtctgtatgagaagaacatga

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