Oryctolagus cuniculus (rabbit): 100358420
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Entry
100358420 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X5
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100358420
04131 Membrane trafficking [BR:
ocu04131
]
100358420
04121 Ubiquitin system [BR:
ocu04121
]
100358420
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100358420
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100358420
Membrane trafficking [BR:
ocu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100358420
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100358420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_2
Zn_ribbon_6
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
100358420
NCBI-ProteinID:
XP_017198247
LinkDB
All DBs
Position
7:complement(129192818..129212538)
Genome browser
AA seq
491 aa
AA seq
DB search
MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKAKPAPRTQRTINRMPAKAAPGEE
EGFDYNEEERYDCKGGELFGNQRRFPGHLFWDFQINILGEKDDTPVHFCDKCGLPIKIYG
RMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQR
DLQAHINHRHMRAGKPVTRASLENVHPPIAPPPAEIPDRFIMPPDKHHMSHIPPKQHIMM
PPPPLQHVPHEHYNQPHEDIRAPPAELSMAPPPPRSVSQETFRISTRKHSNLITVPIQDD
SSSGAREPPPPAPAPAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQ
AAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPP
PHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRMQGPPSQTPLPGPHH
PDQTRYRPYYQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggatcacactgacaatgagttacaaggcactaatagttctggatcgctgggtggtctt
gatgttcgaagacgaattcctataaagctcatttccaaacaagccaacaaagctaaacct
gcacctcgaactcaaaggactataaacaggatgcctgcaaaggctgcacctggtgaggaa
gaaggatttgattataatgaagaggaacggtatgactgtaaagggggtgaactgtttgga
aatcagcgaaggtttcctggacaccttttttgggactttcagataaacatcttaggtgaa
aaggatgatacaccagttcacttctgtgacaagtgtggattacctattaaaatctatgga
cgaatgattccatgcaagcatgttttttgttatgactgtgctattttacatgaaaaaaag
ggagataagatgtgtccaggctgtagtgatcctgtgcagcgaattgagcagtgcacacga
ggttctctcttcatgtgtagcattgttcaagggtgcaagagaacgtatttgtcgcaaaga
gacttacaggctcatatcaaccatcgccatatgagagctggaaaacctgttactcgagct
tcactggaaaatgttcatcctcctattgccccaccaccagctgagatccctgaccgcttt
ataatgccaccagacaagcaccacatgagccatatcccgccaaagcagcacatcatgatg
ccaccacctcctttgcagcatgtgccccacgagcactataatcagcctcacgaggatatc
cgtgctcctccagcagaattgtccatggctccacctccacctcgttcggtcagtcaggaa
acctttcgtatttcaacaagaaaacacagcaatttaataactgtccctattcaggatgac
tcaagttcaggtgctagagaaccaccacctcctgccccagcacctgctcaccatcatcct
gaatatcagggtcaaccagtggtatcgcacccgcatcatattatgcctccacagcaacat
tacgcaccacccccacctcctccaccaccaataagccatccaatgccacatcctccccag
gccgcaggtactcctcacttggtatatagccaagctccacctccaccaatgacctctgct
ccaccaccaattacccctccccctggacatattattgcccagatgccaccttatatgaac
catcctcctccaggacctcccccacctcagcatggtggcccgcctgtaactgctccccct
cctcaccattacaatcctaactctttaccccagttcactgaagatcaaggaactctgagt
cctccatttacacagccggggggaatgagtcctggtatatggcctgcaccaagagggccg
cctcctcctccacgaatgcagggtccgccttctcaaaccccacttcctggaccacatcat
ccagatcagacaagatacagaccgtattaccaatga
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