Oryctolagus cuniculus (rabbit): 100358586
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Entry
100358586 CDS
T03373
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100358586
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
100358586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
100358586
NCBI-ProteinID:
XP_017206355
Ensembl:
ENSOCUG00000015547
LinkDB
All DBs
Position
2:30974625..31320811
Genome browser
AA seq
1647 aa
AA seq
DB search
MACPALGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYS
RKLRNVLVTIYWLGKAANSYASYSGTTLNLKEFEGLWAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGERPFSYPETIEEEGSDMGSLGEEDPIGQMDAGGNPSDAGLELPDGSGKGQPPS
EGTTVTPTARSEEKDAAEVQKRRRLEQAGIKVMPAAQRFASQKQLREEKDAICDIILRKE
NPFLTHQHGKDSESEDEVACRLPDLVKDDFAARRARMNQPKPTVPLNQLLYGPYRKKEAE
TSDGSKPSKGNSEKKSLEYKRNQGKAEELKSVATCITRAQESEPVEEGGKKVPDLYKDDL
AQRRIQGCLGPHREAPSFIIPSKITEADLKTWERLQVSGKTRDGDSQQICAPEPLPEIKA
ETAIRDDFASRKARAYKKASGPRQKFVHFGPVTEIDQQKWKRLSIGKAGPREEVGVAGHS
SRLPAHPASPASAAGPGLKEDPVLTRQDDCRIVNSGLDDYCQRDSRLAPVPESQEEWASS
VGECPGNTEEVTSKPVPQGGKEENEGVAPRASAMLPEAECPAESSQPLACPLASEREPAG
AEEKAEESAAPAWSASGPKGQGKLSESQKDDTMARTTGESLSHPGSSPNQCLPVPFAKQQ
EVEESAEDPPVKDRRYGPRTPVSDDAESTSLFDMRCEEEAAVLPHSRARQEQLQLINSQL
REEDDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIVQ
EKERRERELHEAYKNARSQEEADGILQQYIERFTISEAVLERLEMPKILERSHSTEPNLS
SFLSDPNPMKYLRQQSLPPPKFTATVETTIARASAPDASTAAGSGSPSKTVTPKAVPMLT
PKPYSQPKNSQEVLKTFKVDGKVSMNGETAHGDEEEKGRECPTVTPAVSLTTSQMFEGVA
RVHGSPVELKQDNNSVEINIKKPNPVPQEATATTEETELNSHEDENDGGEPGSENVDLAA
SEPQHFTSTVTRCSPTVALVELPSSPSPDERGQKSSENEMSGKVELVLSQKVVKPKSPEP
EATLTFPFLDKMHETSQLHLPNLNSQELPGTASVPLRVQNSWRRSQFFSQSDSPSNEKSP
VTTPFKFWAWDPEEERRRQEKWQQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYY
EEERKIIEDTVVPFTISSSSADQLSTSSSVTEGSGTVKKMDLENCQEEKEERRQKEPFQG
DDNDLLHKTRGCDPLEEKGSSLMPEAPAHSENPTSKGIHQDHQLGAEAGALSCGMNPQLS
QDPSQHQQVSNPPTHISEDVKPKSLPLDRNMSHQIESPTERRKKSPRGSFQAGSFSPCSP
TPPGQSPSRSISGKKLCSSCGLALGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAMSGT
DVRIRNSLLNCNDCYLRSRSAGQPTTL
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcccgcgctcggtctggaagctcttcagcccctgcagcccgagccgcccccc
gagcccgccttctccgaggcgcagaagtggatcgagcaagtaactggcagaagttttggt
gacaaagattttcggactggattagaaaatggaatccttctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggattggac
aatattatcttattcttgagaggttgtaaagagctcggcctcaaagaatctcaactgttt
gacccgagtgacctccaggatacgtccaacagagtaacggtcaagagcctcgattatagt
cggaagctgagaaatgtactagtgaccatttattggctgggaaaggctgcaaatagctat
gcatcctacagcggaacgactctgaacctgaaggagtttgaaggcttgtgggctcagatg
agaaaggagactgatgacattgagagtcctaagcgcagcatccgagacagtggttacatc
gactgctgggattcggagcgcagcgactccctctctcctcctcggcacggtcgcgatgac
tccttcgacagcctcgattccttcggctcccgttccaggcagacaccttcgccagatgta
gtgctcaggggaagcagcgatgggagaggaagcgactctgagtccgacttgccacatcgg
aagctaccagatgtgaagaaagatgacatgtctgcacgacggacttcccatggtgagcca
aaatcagcagtgccttttaaccagtacctccccaacaagagcaatcagacggcctacgtc
cccgctcctctgagaaagaagaaggcggagcgggaggagtacaggaagagctggagcact
gccacctccccgctgggtggtgagaggcccttcagctatcctgaaacaatagaggaagag
ggaagtgacatggggtctctgggtgaagaggacccaattggccagatggacgcaggtgga
aatccttctgatgccgggttagaattacccgacggcagtggtaaggggcagcctccttca
gaggggactacggtgacacccacggccaggtcagaagaaaaagatgctgctgaagttcaa
aagcgcagaaggctagagcaagcaggaatcaaggtcatgccagcagcacagcgctttgcc
agtcaaaagcaattgagagaagagaaggacgccatttgtgatattatccttcgcaaagag
aaccctttcctgacccatcagcatggcaaagattctgagtcagaagacgaagttgcgtgt
cgactgcccgatcttgtgaaagatgactttgctgcgaggagagcaaggatgaaccaaccc
aagccaacggtgccactgaatcagctcctctatgggccttatagaaagaaagaggcagag
acatcagatggcagcaaaccctccaaaggaaactcagaaaagaaaagcctagaatataaa
agaaaccagggcaaagcagaagagctgaagtcagtagcgacctgtattacgagggcccag
gagagtgaaccagtggaagagggagggaagaaggtgccagatctttacaaggacgacctg
gcccagcggagaattcagggctgccttggccctcaccgcgaggccccaagcttcatcata
ccctccaagataacagaagctgacttgaagacgtgggagagactgcaagtgtcaggaaag
acgagggacggagattctcagcaaatctgtgcccccgagcctctaccagaaattaaagca
gaaaccgccatccgcgatgactttgccagccgcaaagccagggcctataagaaagcttcc
ggcccaaggcaaaaatttgtgcacttcgggccggtgacagagatagaccagcagaagtgg
aagcggctcagcattggcaaggcggggccccgggaggaggtaggagtcgccggccacagc
agcaggctgccagcacaccccgcatcccctgcctcagccgccggccctggactaaaggaa
gacccagtgctcactcggcaggatgactgcagaatagtgaattctggcctagatgactat
tgccaaagggactcgaggctggctcctgtgccggagtctcaggaagagtgggccagcagt
gtgggcgagtgccccgggaacacggaggaagttacatccaaaccggtgccacagggtggc
aaagaagaaaatgaaggagttgctccaagagcatctgcgatgttgcccgaggcagaatgc
ccggcggagagcagccagccccttgcctgtcctctggcctctgagcgggagccggcaggg
gctgaagagaaggcggaggagtcagcagcgcctgcctggagtgccagtggaccgaaaggc
caaggaaagctctctgagtcacagaaagatgacacaatggccaggacaactggggagtcc
ctgagtcaccctggatccagcccaaaccagtgccttccggttccatttgcaaagcaacag
gaggtcgaggaatccgctgaggatccacccgtgaaggatcggagatacggtccgagaact
cctgtgtctgatgacgcagagagcacgagtttgtttgacatgcggtgcgaggaggaggcc
gccgtgctgccgcacagcagggcccgccaggagcagctgcaactgataaacagccagctg
cgggaagaggacgacaaatggcaagacgacctggctcgttggaagagtcgtaggagaagt
gcatcacaagacttgatcaagaaagaggaggaaagaaaaaaaatggagaagttactggct
ggagaggatggaaccagtgaacgaaggaaaagcatcaagacctacagagaaattgttcaa
gaaaaagagcggagagagagagagctgcacgaagcatataagaacgcacggtcgcaggag
gaggccgacgggatcctgcagcagtacatcgagaggtttaccatcagcgaggctgttctt
gaacgcttggagatgccaaaaattctggaaagaagccattcaacagagccaaacttatcc
tccttcctgagcgaccccaaccccatgaaatacctgcggcaacagtcactgcctccgccc
aagttcactgccactgtggaaaccaccatcgcgcgtgccagtgccccggatgccagcacg
gcagcaggcagtgggtcccccagcaaaactgtgacccccaaagcagtgcctatgctgaca
cccaagccttactcccagcccaaaaactctcaagaggttctcaagacctttaaggtagat
gggaaagtcagcatgaacggagagacagcccacggagatgaggaagagaagggaagagag
tgtcccacagtgacacctgctgtctccttaaccacgtcccagatgtttgaaggtgtggcc
agagtgcacgggtcaccagtggagctcaagcaagacaacaacagcgttgagatcaacata
aagaagccaaatcctgttccccaggaagcgacagccaccacggaggaaacagaactgaac
agccacgaagatgagaatgatggcggagaaccaggaagtgagaatgtagaccttgccgca
tcagagcctcagcactttacatccaccgtgactcgctgcagccccacggtggccctggtg
gagctgccctccagcccctcgcccgacgagagaggccagaagagctcagaaaatgaaatg
agcgggaaggtggagctggtgctgtctcagaaggtggtaaagccaaagtccccagaacca
gaagctaccctgacatttccatttctggacaaaatgcatgaaaccagccaactacatttg
ccaaatctcaattctcaagagttgcctggcactgccagtgttccccttagagttcagaac
tcttggcgacggtcccagtttttctcccagtcagattctccaagcaatgaaaagtcacct
gtaactacaccttttaagttctgggcgtgggaccccgaagaggagcgcagacgacaggaa
aaatggcaacaggagcaggagcgtttgctccaggagagataccagaaggagcaggacaag
ctaaaagaagagtgggaaaaggcccagaaggaggtggaagaggaagaacgcagatactat
gaggaggagcgtaagataattgaagatactgtggtcccgtttactatttcctcaagttct
gcagaccagctgtctacatcttcctctgtgactgaaggcagtgggacagtgaaaaagatg
gacttggaaaactgtcaagaagaaaaagaagagagaagacagaaggaaccgttccaggga
gatgacaatgacttattgcataagactagaggatgtgacccactggaggagaagggcagc
agcctaatgccagaggccccggctcattctgagaatcccacatccaaaggaatccatcaa
gaccatcagctgggagcagaggccggagccctcagctgtgggatgaatccacagctgtct
caggatccatcccagcatcagcaggtgtcaaacccacccacgcacatttcagaagatgtg
aagccaaaatccctgccactggatagaaacatgagccatcagattgagtctcccacggaa
aggcgaaagaaaagtcctcgaggaagcttccaggctgggtccttctcgccctgctctccc
accccgcccggccagtcacccagcaggtcgatcagcgggaagaagctgtgctcttcctgt
gggctggccctggggaaaggagctgcgatgatcatcgagaccctgaatctgtatttccac
atccagtgtttcaggtgtggaatttgtaaaggacagcttggagatgccatgagcgggaca
gatgttagaatccgaaatagtcttctaaactgtaacgactgctacctgcgatccagaagt
gctggccagcccacaaccttgtga
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integrated database retrieval system
