Oryctolagus cuniculus (rabbit): 100358612
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Entry
100358612 CDS
T03373
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocu03009
]
100358612
Enzymes [BR:
ocu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
100358612
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100358612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
Methyltransf_25
FtsJ
PCMT
TRM5-TYW2_MTfase
Methyltransf_15
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
100358612
NCBI-ProteinID:
XP_002712919
Ensembl:
ENSOCUG00000008203
LinkDB
All DBs
Position
8:79031726..79041417
Genome browser
AA seq
809 aa
AA seq
DB search
MGRKLDPTKKAKRGPGRKARKQKGAETELLRFLPAADDENSKRLSSRARKRAAKRRLSSA
ETPKTNKPPGAKSLPGKLPKGAVQTPAKKGAPPSFDTARGKKRPAPAHSSDEEEEEEESE
EDGVENQGGLWDSEDSDADVIDDYGADSGSEGEDEDEELLPIEKMARKQKAQEAAGGQWS
EEDSDEEEEMATASGPTKEQEADSSLQINVDEEEPFVLPPDGQMEQDAQAPDLQRIHKRI
QDIVGVLRDFGAQREEGRSRAEYLSRLRKDLATYYSYGDFLLSKLMDLFPLSELVEFLEA
NEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLA
GHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAERLK
SVVGNLHRLGVTNTIISHHDGRHFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKD
ILRCAHLQKELLLSAIDSVNAASKTGGYLVYCTCSVMVEENEWVVDYALKKRNVRLVPTG
LDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSVPQPQPGDSATAT
PAGLGLSDLKGQATPRSESSSQPAPKAAGAAKAKQQAQKRQHPKKASFQKLNGVAKRAGA
ELAAAPSGTKAQASPKLKENRQPAEKADGIREPEVRGQPKRPARKRQTPKKGATLKQNAP
PKGTDTETPAVPTFSKPKDGAQPLGKARGAKRLKQHLQEQSLKKAAVQTQNGTAEGPPVP
TAPSLTANRPPPAKRKRSRSRGHSQPLLA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggaccctacaaagaaggcgaagcgcgggccgggccgaaaggcccga
aagcagaagggtgcggagacggagctcctccgtttcttgcctgcagctgatgacgaaaat
tccaagagactatccagtcgtgcccgaaagagggcagccaagaggaggttgagctctgct
gaaactcccaagacaaataagcctcctggggccaagtccttgcccggaaagctccccaaa
ggagccgtgcagactcctgctaagaagggagcccccccttcatttgacactgctcggggc
aagaagcggccagctccagcccacagcagcgatgaggaagaggaggaggaagagtctgaa
gaggatggtgtggagaaccaggggggcctctgggactcagaggacagtgatgctgatgtc
atagacgactacggggccgactccggctccgagggagaggatgaagatgaagagttgctg
cccattgaaaaaatggctcggaagcagaaggcccaggaagctgcagggggccagtggagt
gaggaagattctgatgaagaggaagaaatggccactgcatcaggtccgacgaaggagcag
gaagctgactccagcctgcagatcaatgtggatgaggaagagccctttgtgctgccccct
gatgggcagatggagcaggatgcccaggccccagacctgcagcgaattcacaagcgcatc
caggacattgtgggcgtactgcgtgattttggggcccagcgggaggaaggtcggtctcgg
gcagagtacctgagccggcttcggaaggacctggccacttactactcgtacggggacttt
ctgcttagcaagctcatggacctcttccctctgtctgagctggtggagttcttagaggcc
aatgaggtgcctcggcccgtcaccctccggaccaacaccttgaaaacccgccgccgagac
ctggcccaggcgctgatcaatcgtggggttaacctggaccccttgggcaagtggtcaaag
actgggctggtggtgtatgattcttcagtgcccattggtgctacccccgagtacctggca
gggcactacatgcttcagggggcctccagcatgttacctgtcatggccctcgccccccag
gaacacgagcggatcctcgacatgtgttgtgcgccaggagggaagaccagctacatagcc
caactgatgaagaacacgggtgtgatccttgccaatgatgccaacgccgagcggctcaag
agtgttgtgggcaacctgcaccggctgggagtcaccaacaccatcatcagccaccacgat
gggcgtcatttccccaaggtggtggggggttttgaccgagtactgctggacgctccctgc
agtggcactggggtcatctccaaagacccggccgtgaagacaaacaaggacgagaaggac
atcctacgctgtgcccaccttcagaaggagttgctgctgagtgctatcgattctgtcaac
gccgcctccaagacaggcggctacctcgtctactgcacctgttctgtcatggtggaagag
aacgagtgggtggtagactacgccctgaagaagaggaacgtgcggctggtgcccacaggc
ctagactttggccaggagggttttacccgctttcgggaaaggcgcttccatcctagtctg
cgttctacccggcgcttctaccctcacacccacaacatggatggcttctttattgccaag
ttcaagaaattttccaactctgtcccccagccccagccaggagattctgccacagccacg
cctgcaggcctaggcttgtctgacttgaagggtcaggccacccccaggtctgagagcagc
agccagccggccccgaaggctgcaggggctgcaaaggcaaagcagcaggcgcagaagcgg
caacatcccaagaaggcctctttccagaagctcaacggcgtcgccaaaagggcaggcgca
gaactggccgctgcaccttcgggcacaaaggcccaggcctcccccaagctcaaggagaac
cgtcagccagctgagaaggctgacgggatcagggagccagaggtgagagggcagcccaag
cgaccggcacgtaaacggcagacccccaagaagggcgccaccctgaagcagaacgcccct
cccaagggcacggacacagaaacacctgccgtgcccaccttctccaagcccaaggatggc
gctcagccccttgggaaggccagaggggccaagaggctcaagcagcatttgcaagagcag
tctttgaagaaggctgccgtccagactcagaatggcactgctgaagggcctccggttccc
accgcaccttccctcactgccaaccggcccccacctgcaaagaggaagagatctcggtcc
aggggccacagccagcccctgctggcctag
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